RNA–Protein interactions for RNA: ENST00000547877.5

LETMD1-212, Transcript of LETM1 domain containing 1, humanhuman

TSL 5

Gene LETMD1, Length 2,020 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-212ENST00000547877 TNNI2P48788 182 aa17.62■□□□□ 0.41
LETMD1-212ENST00000547877 KRT32Q14532 448 aa17.62■□□□□ 0.41
LETMD1-212ENST00000547877 TMEM39BQ9GZU3 492 aa17.62■□□□□ 0.41
LETMD1-212ENST00000547877 INCENPQ9NQS7 918 aa17.62■□□□□ 0.41
LETMD1-212ENST00000547877 TACC3Q9Y6A5 838 aa17.62■□□□□ 0.41
LETMD1-212ENST00000547877 COL2A1P02458 1487 aaPredicted RBP17.61■□□□□ 0.41
LETMD1-212ENST00000547877 RASA3Q14644 834 aa17.61■□□□□ 0.41
LETMD1-212ENST00000547877 AKNAD1Q5T1N1 836 aa17.61■□□□□ 0.41
LETMD1-212ENST00000547877 STAG1Q8WVM7 1258 aa17.61■□□□□ 0.41
LETMD1-212ENST00000547877 JAKMIP1Q96N16 626 aaKnown RBP17.61■□□□□ 0.41
LETMD1-212ENST00000547877 ROBO3Q96MS0 1386 aa17.61■□□□□ 0.41
LETMD1-212ENST00000547877 HLA-DOAP06340 250 aa17.6■□□□□ 0.41
LETMD1-212ENST00000547877 MFSD6Q6ZSS7 791 aa17.6■□□□□ 0.41
LETMD1-212ENST00000547877 PNMA8AQ86V59 439 aaPredicted RBP17.6■□□□□ 0.41
LETMD1-212ENST00000547877 APOBEC3FQ8IUX4 373 aaKnown RBP17.6■□□□□ 0.41
LETMD1-212ENST00000547877 ZNF526Q8TF50 670 aaPredicted RBP17.6■□□□□ 0.41
LETMD1-212ENST00000547877 DYNLL2Q96FJ2 89 aa17.6■□□□□ 0.41
LETMD1-212ENST00000547877 CSRNP1Q96S65 589 aa17.6■□□□□ 0.41
LETMD1-212ENST00000547877 DEFB129Q9H1M3 183 aa17.6■□□□□ 0.41
LETMD1-212ENST00000547877 RRAGCQ9HB90 399 aa17.6■□□□□ 0.41
LETMD1-212ENST00000547877 NEDD4P46934 1319 aa17.6■□□□□ 0.41
LETMD1-212ENST00000547877 SLC3A2P08195 630 aaKnown RBP17.6■□□□□ 0.41
LETMD1-212ENST00000547877 VEGFAP15692 232 aaPredicted RBP17.6■□□□□ 0.41
LETMD1-212ENST00000547877 MCM4P33991 863 aa17.6■□□□□ 0.41
LETMD1-212ENST00000547877 COL9A3Q14050 684 aaPredicted RBP17.6■□□□□ 0.41
LETMD1-212ENST00000547877 EAPPQ56P03 285 aaPredicted RBP17.6■□□□□ 0.41
LETMD1-212ENST00000547877 RNF41Q9H4P4 317 aaPredicted RBP17.6■□□□□ 0.41
LETMD1-212ENST00000547877 PI4KBQ9UBF8 816 aa17.6■□□□□ 0.41
LETMD1-212ENST00000547877 SERPINB13Q9UIV8 391 aa17.6■□□□□ 0.41
LETMD1-212ENST00000547877 PITPNM2Q9BZ72 1349 aa17.59■□□□□ 0.41
LETMD1-212ENST00000547877 CASTP20810 708 aaKnown RBP17.59■□□□□ 0.41
LETMD1-212ENST00000547877 PTMSP20962 102 aa17.59■□□□□ 0.41
LETMD1-212ENST00000547877 CDAN1Q8IWY9 1227 aa17.59■□□□□ 0.41
LETMD1-212ENST00000547877 ZC3H15Q8WU90 426 aaKnown RBP17.59■□□□□ 0.41
LETMD1-212ENST00000547877 NEK1Q96PY6 1258 aa17.59■□□□□ 0.41
LETMD1-212ENST00000547877 UPF3BQ9BZI7 483 aaKnown RBP17.59■□□□□ 0.41
LETMD1-212ENST00000547877 ST18O60284 1047 aa17.59■□□□□ 0.41
LETMD1-212ENST00000547877 PRDM1O75626 825 aa17.59■□□□□ 0.41
LETMD1-212ENST00000547877 FGRP09769 529 aa17.59■□□□□ 0.41
LETMD1-212ENST00000547877 PSMA5P28066 241 aa17.59■□□□□ 0.41
LETMD1-212ENST00000547877 PDE4BQ07343 736 aa17.59■□□□□ 0.41
LETMD1-212ENST00000547877 TRDNQ13061 729 aa17.59■□□□□ 0.41
LETMD1-212ENST00000547877 C16orf86Q6ZW13 317 aa17.59■□□□□ 0.41
LETMD1-212ENST00000547877 SLC44A5Q8NCS7 719 aa17.59■□□□□ 0.41
LETMD1-212ENST00000547877 TM6SF1Q9BZW5 370 aa17.59■□□□□ 0.41
LETMD1-212ENST00000547877 EHD4Q9H223 541 aa17.59■□□□□ 0.41
LETMD1-212ENST00000547877 PGAP2Q9UHJ9 254 aa17.59■□□□□ 0.41
LETMD1-212ENST00000547877 POLR2AP24928 1970 aaKnown RBP17.58■□□□□ 0.41
LETMD1-212ENST00000547877 SIPA1L1O43166 1804 aa17.58■□□□□ 0.41
LETMD1-212ENST00000547877 PCP11498 1178 aaKnown RBP17.58■□□□□ 0.4
LETMD1-212ENST00000547877 CPA1P15085 419 aa17.58■□□□□ 0.4
LETMD1-212ENST00000547877 GABPAQ06546 454 aa17.58■□□□□ 0.4
LETMD1-212ENST00000547877 NCOA7Q8NI08 942 aa17.58■□□□□ 0.4
LETMD1-212ENST00000547877 DCPSQ96C86 337 aaKnown RBP17.58■□□□□ 0.4
LETMD1-212ENST00000547877 TEPSINQ96N21 525 aa17.58■□□□□ 0.4
LETMD1-212ENST00000547877 CNNM2Q9H8M5 875 aa17.58■□□□□ 0.4
LETMD1-212ENST00000547877 NMRK2Q9NPI5 230 aa17.58■□□□□ 0.4
LETMD1-212ENST00000547877 TOMM22Q9NS69 142 aa17.58■□□□□ 0.4
LETMD1-212ENST00000547877 SLURP2P0DP57 97 aa17.57■□□□□ 0.4
LETMD1-212ENST00000547877 RRP12Q5JTH9 1297 aaKnown RBP17.57■□□□□ 0.4
LETMD1-212ENST00000547877 RALYLQ86SE5 291 aaKnown RBP17.57■□□□□ 0.4
LETMD1-212ENST00000547877 NKX2-3Q8TAU0 364 aa17.57■□□□□ 0.4
LETMD1-212ENST00000547877 ZSWIM6Q9HCJ5 1215 aa17.57■□□□□ 0.4
LETMD1-212ENST00000547877 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.57■□□□□ 0.4
LETMD1-212ENST00000547877 DDX11L8A8MPP1 907 aa17.57■□□□□ 0.4
LETMD1-212ENST00000547877 B4E1Z4 1266 aa17.57■□□□□ 0.4
LETMD1-212ENST00000547877 CDK8P49336 464 aa17.57■□□□□ 0.4
LETMD1-212ENST00000547877 MCM2P49736 904 aa17.57■□□□□ 0.4
LETMD1-212ENST00000547877 BLOC1S2Q6QNY1 142 aa17.57■□□□□ 0.4
LETMD1-212ENST00000547877 CRACR2BQ8N4Y2 399 aaPredicted RBP17.57■□□□□ 0.4
LETMD1-212ENST00000547877 KRT23Q9C075 422 aa17.57■□□□□ 0.4
LETMD1-212ENST00000547877 FAM196BA6NMK8 535 aa17.56■□□□□ 0.4
LETMD1-212ENST00000547877 ORC4O43929 436 aa17.56■□□□□ 0.4
LETMD1-212ENST00000547877 HMGB1P09429 215 aaKnown RBP17.56■□□□□ 0.4
LETMD1-212ENST00000547877 POTEIP0CG38 1075 aa17.56■□□□□ 0.4
LETMD1-212ENST00000547877 POTEJP0CG39 1038 aa17.56■□□□□ 0.4
LETMD1-212ENST00000547877 RAB3GAP1Q15042 981 aa17.56■□□□□ 0.4
LETMD1-212ENST00000547877 RUFY3Q7L099 469 aa17.56■□□□□ 0.4
LETMD1-212ENST00000547877 METTL16Q86W50 562 aaKnown RBP17.56■□□□□ 0.4
LETMD1-212ENST00000547877 FOXP4Q8IVH2 680 aaPredicted RBP17.56■□□□□ 0.4
LETMD1-212ENST00000547877 SULF1Q8IWU6 871 aa17.56■□□□□ 0.4
LETMD1-212ENST00000547877 DNAJC18Q9H819 358 aa17.56■□□□□ 0.4
LETMD1-212ENST00000547877 MKNK2Q9HBH9 465 aa17.56■□□□□ 0.4
LETMD1-212ENST00000547877 ZNF287Q9HBT7 754 aa17.56■□□□□ 0.4
LETMD1-212ENST00000547877 CYP46A1Q9Y6A2 500 aa17.56■□□□□ 0.4
LETMD1-212ENST00000547877 KDM4AO75164 1064 aa17.55■□□□□ 0.4
LETMD1-212ENST00000547877 CD2BP2O95400 341 aaKnown RBP17.55■□□□□ 0.4
LETMD1-212ENST00000547877 NEK4P51957 841 aa17.55■□□□□ 0.4
LETMD1-212ENST00000547877 PRAMEF18Q5VWM3 479 aa17.55■□□□□ 0.4
LETMD1-212ENST00000547877 CLEC17AQ6ZS10 378 aa17.55■□□□□ 0.4
LETMD1-212ENST00000547877 MB21D2Q8IYB1 491 aaPredicted RBP17.55■□□□□ 0.4
LETMD1-212ENST00000547877 PPP2R3BQ9Y5P8 575 aa17.55■□□□□ 0.4
LETMD1-212ENST00000547877 RANBP6O60518 1105 aaKnown RBP17.55■□□□□ 0.4
LETMD1-212ENST00000547877 HSP90AA1P07900 732 aaKnown RBP17.55■□□□□ 0.4
LETMD1-212ENST00000547877 KRT26Q7Z3Y9 468 aa17.55■□□□□ 0.4
LETMD1-212ENST00000547877 SPRYD3Q8NCJ5 442 aa17.55■□□□□ 0.4
LETMD1-212ENST00000547877 ESR2Q92731 530 aa17.55■□□□□ 0.4
LETMD1-212ENST00000547877 TRIM34Q9BYJ4 488 aa17.55■□□□□ 0.4
LETMD1-212ENST00000547877 CWC22Q9HCG8 908 aaKnown RBP17.55■□□□□ 0.4
LETMD1-212ENST00000547877 ZSWIM5Q9P217 1185 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms