RNA–Protein interactions for RNA: ENST00000547530.6

BRF1-211, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRF1, Length 3,358 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-211ENST00000547530 NBPF14Q5TI25 921 aa17.27■□□□□ 0.36
BRF1-211ENST00000547530 NBPF10Q6P3W6 841 aaKnown RBP17.27■□□□□ 0.36
BRF1-211ENST00000547530 NBPF15Q8N660 670 aa17.27■□□□□ 0.36
BRF1-211ENST00000547530 SART3Q15020 963 aaKnown RBP17.27■□□□□ 0.35
BRF1-211ENST00000547530 CCDC93Q567U6 631 aa17.27■□□□□ 0.35
BRF1-211ENST00000547530 TC2NQ8N9U0 490 aa17.27■□□□□ 0.35
BRF1-211ENST00000547530 NOM1Q5C9Z4 860 aaKnown RBP17.26■□□□□ 0.35
BRF1-211ENST00000547530 GPR161Q8N6U8 529 aaKnown RBP17.26■□□□□ 0.35
BRF1-211ENST00000547530 JADE2Q9NQC1 790 aa17.26■□□□□ 0.35
BRF1-211ENST00000547530 PXDNQ92626 1479 aa17.26■□□□□ 0.35
BRF1-211ENST00000547530 CYP2D7A0A087X1C5 515 aa17.26■□□□□ 0.35
BRF1-211ENST00000547530 CTAGE9A4FU28 777 aa17.26■□□□□ 0.35
BRF1-211ENST00000547530 PHKA1P46020 1223 aa17.26■□□□□ 0.35
BRF1-211ENST00000547530 NOA1Q8NC60 698 aaKnown RBP17.26■□□□□ 0.35
BRF1-211ENST00000547530 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.26■□□□□ 0.351e-6■■■■□ 26.5
BRF1-211ENST00000547530 HSD3B7Q9H2F3 369 aa17.26■□□□□ 0.35
BRF1-211ENST00000547530 RRP15Q9Y3B9 282 aaKnown RBP17.26■□□□□ 0.35
BRF1-211ENST00000547530 CTAGE15A4D2H0 777 aa17.26■□□□□ 0.35
BRF1-211ENST00000547530 CTAGE8P0CG41 777 aa17.26■□□□□ 0.35
BRF1-211ENST00000547530 VSNL1P62760 191 aa17.26■□□□□ 0.35
BRF1-211ENST00000547530 CTAGE6Q86UF2 777 aa17.26■□□□□ 0.35
BRF1-211ENST00000547530 CTAGE4Q8IX94 777 aa17.26■□□□□ 0.35
BRF1-211ENST00000547530 ZSWIM5Q9P217 1185 aa17.26■□□□□ 0.35
BRF1-211ENST00000547530 LRP2BPQ9P2M1 347 aa17.26■□□□□ 0.35
BRF1-211ENST00000547530 PREX1Q8TCU6 1659 aa17.26■□□□□ 0.35
BRF1-211ENST00000547530 MPHOSPH8Q99549 860 aa17.25■□□□□ 0.35
BRF1-211ENST00000547530 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.25■□□□□ 0.35
BRF1-211ENST00000547530 CEMIPQ8WUJ3 1361 aa17.25■□□□□ 0.35
BRF1-211ENST00000547530 ANKRD26Q9UPS8 1709 aa17.25■□□□□ 0.35
BRF1-211ENST00000547530 CYP27B1O15528 508 aa17.25■□□□□ 0.35
BRF1-211ENST00000547530 CDKL5O76039 1030 aa17.25■□□□□ 0.35
BRF1-211ENST00000547530 PHKG2P15735 406 aa17.25■□□□□ 0.35
BRF1-211ENST00000547530 MCM7P33993 719 aa17.25■□□□□ 0.35
BRF1-211ENST00000547530 FOXO4P98177 505 aa17.25■□□□□ 0.35
BRF1-211ENST00000547530 TSR1Q2NL82 804 aaKnown RBP17.25■□□□□ 0.35
BRF1-211ENST00000547530 MICALL1Q8N3F8 863 aa17.25■□□□□ 0.35
BRF1-211ENST00000547530 SDR42E1Q8WUS8 393 aa17.25■□□□□ 0.35
BRF1-211ENST00000547530 UBAC1Q9BSL1 405 aa17.25■□□□□ 0.35
BRF1-211ENST00000547530 TXLNAP40222 546 aa17.25■□□□□ 0.35
BRF1-211ENST00000547530 KIAA1328Q86T90 577 aa17.25■□□□□ 0.35
BRF1-211ENST00000547530 ARHGEF25Q86VW2 580 aa17.25■□□□□ 0.35
BRF1-211ENST00000547530 APPBP2Q92624 585 aa17.25■□□□□ 0.35
BRF1-211ENST00000547530 C19orf44Q9H6X5 657 aa17.25■□□□□ 0.35
BRF1-211ENST00000547530 V9GY48 417 aaPredicted RBP17.25■□□□□ 0.35
BRF1-211ENST00000547530 NEDD4P46934 1319 aa17.25■□□□□ 0.35
BRF1-211ENST00000547530 PHLPP2Q6ZVD8 1323 aa17.24■□□□□ 0.35
BRF1-211ENST00000547530 ERLIN1O75477 346 aa17.24■□□□□ 0.35
BRF1-211ENST00000547530 ANKRD13CQ8N6S4 541 aa17.24■□□□□ 0.35
BRF1-211ENST00000547530 PLBD2Q8NHP8 589 aa17.24■□□□□ 0.35
BRF1-211ENST00000547530 TEX13AQ9BXU3 409 aaPredicted RBP17.24■□□□□ 0.35
BRF1-211ENST00000547530 FUT8Q9BYC5 575 aa17.24■□□□□ 0.35
BRF1-211ENST00000547530 PIH1D3Q9NQM4 214 aaKnown RBP17.24■□□□□ 0.35
BRF1-211ENST00000547530 KRT9P35527 623 aa17.24■□□□□ 0.35
BRF1-211ENST00000547530 MCAMP43121 646 aa17.24■□□□□ 0.35
BRF1-211ENST00000547530 RTN1Q16799 776 aa17.24■□□□□ 0.35
BRF1-211ENST00000547530 TRMT112Q9UI30 125 aaKnown RBP17.24■□□□□ 0.35
BRF1-211ENST00000547530 TBX22Q9Y458 520 aa17.24■□□□□ 0.35
BRF1-211ENST00000547530 ZRANB2O95218 330 aaKnown RBP eCLIP17.23■□□□□ 0.35
BRF1-211ENST00000547530 UBXN1Q04323 297 aa17.23■□□□□ 0.35
BRF1-211ENST00000547530 MFSD6Q6ZSS7 791 aa17.23■□□□□ 0.35
BRF1-211ENST00000547530 NUTM2AQ8IVF1 878 aaPredicted RBP17.23■□□□□ 0.35
BRF1-211ENST00000547530 MB21D2Q8IYB1 491 aaPredicted RBP17.23■□□□□ 0.35
BRF1-211ENST00000547530 SIRT1Q96EB6 747 aa17.23■□□□□ 0.35
BRF1-211ENST00000547530 FAM204AQ9H8W3 233 aa17.23■□□□□ 0.35
BRF1-211ENST00000547530 MRFAP1Q9Y605 127 aa17.23■□□□□ 0.35
BRF1-211ENST00000547530 FXR1P51114 621 aaKnown RBP eCLIP17.23■□□□□ 0.35
BRF1-211ENST00000547530 GREM2Q9H772 168 aa17.23■□□□□ 0.35
BRF1-211ENST00000547530 CXCR5P32302 372 aa17.23■□□□□ 0.35
BRF1-211ENST00000547530 EIF5P55010 431 aaKnown RBP17.23■□□□□ 0.35
BRF1-211ENST00000547530 WTAPQ15007 396 aa17.23■□□□□ 0.35
BRF1-211ENST00000547530 NOSTRINQ8IVI9 506 aa17.23■□□□□ 0.35
BRF1-211ENST00000547530 SLC4A4Q9Y6R1 1079 aa17.23■□□□□ 0.35
BRF1-211ENST00000547530 ADAMTS13Q76LX8 1427 aa17.23■□□□□ 0.35
BRF1-211ENST00000547530 SH3TC1Q8TE82 1336 aa17.22■□□□□ 0.35
BRF1-211ENST00000547530 CYP27A1Q02318 531 aa17.22■□□□□ 0.35
BRF1-211ENST00000547530 CHP1Q99653 195 aa17.22■□□□□ 0.35
BRF1-211ENST00000547530 NEO1Q92859 1461 aa17.22■□□□□ 0.35
BRF1-211ENST00000547530 EIF3JO75822 258 aaKnown RBP17.22■□□□□ 0.35
BRF1-211ENST00000547530 ITGA6P23229 1130 aa17.22■□□□□ 0.35
BRF1-211ENST00000547530 MAP3K9P80192 1104 aa17.22■□□□□ 0.35
BRF1-211ENST00000547530 CTR9Q6PD62 1173 aa17.22■□□□□ 0.35
BRF1-211ENST00000547530 SMARCC1Q92922 1105 aaPredicted RBP17.22■□□□□ 0.35
BRF1-211ENST00000547530 LIG3P49916 1009 aa17.22■□□□□ 0.35
BRF1-211ENST00000547530 GTF2A1P52655 376 aaPredicted RBP17.22■□□□□ 0.35
BRF1-211ENST00000547530 ATL3Q6DD88 541 aa17.22■□□□□ 0.35
BRF1-211ENST00000547530 HDXQ7Z353 690 aa17.22■□□□□ 0.35
BRF1-211ENST00000547530 SMARCAL1Q9NZC9 954 aa17.22■□□□□ 0.35
BRF1-211ENST00000547530 IKBKBO14920 756 aa17.21■□□□□ 0.35
BRF1-211ENST00000547530 EHD4Q9H223 541 aa17.21■□□□□ 0.35
BRF1-211ENST00000547530 SAMM50Q9Y512 469 aa17.21■□□□□ 0.35
BRF1-211ENST00000547530 UBN2Q6ZU65 1347 aa17.21■□□□□ 0.35
BRF1-211ENST00000547530 ZEB2O60315 1214 aa17.21■□□□□ 0.35
BRF1-211ENST00000547530 ALDH8A1Q9H2A2 487 aaPredicted RBP17.21■□□□□ 0.35
BRF1-211ENST00000547530 GNL3LQ9NVN8 582 aaKnown RBP17.21■□□□□ 0.35
BRF1-211ENST00000547530 SYNRGQ9UMZ2 1314 aa17.21■□□□□ 0.34
BRF1-211ENST00000547530 GOLGB1Q14789 3259 aaKnown RBP17.2■□□□□ 0.34
BRF1-211ENST00000547530 TRIM49BA6NDI0 452 aa17.2■□□□□ 0.34
BRF1-211ENST00000547530 CUTAO60888 179 aa17.2■□□□□ 0.34
BRF1-211ENST00000547530 ATP2C2O75185 946 aa17.2■□□□□ 0.34
BRF1-211ENST00000547530 CD44P16070 742 aaKnown RBP17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms