RNA–Protein interactions for RNA: ENST00000547372.5

RBFOX1-208, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 5 BASIC

Gene RBFOX1, Length 3,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-208ENST00000547372 HSD3B7Q9H2F3 369 aa13.48□□□□□ -0.25
RBFOX1-208ENST00000547372 SLC40A1Q9NP59 571 aa13.48□□□□□ -0.25
RBFOX1-208ENST00000547372 PPANQ9NQ55 473 aaKnown RBP13.48□□□□□ -0.25
RBFOX1-208ENST00000547372 INTS13Q9NVM9 706 aa13.48□□□□□ -0.25
RBFOX1-208ENST00000547372 PCMTD1Q96MG8 357 aaPredicted RBP13.48□□□□□ -0.25
RBFOX1-208ENST00000547372 TFR2Q9UP52 801 aa13.48□□□□□ -0.25
RBFOX1-208ENST00000547372 RIPOR2Q9Y4F9 1068 aa13.48□□□□□ -0.25
RBFOX1-208ENST00000547372 UPP2O95045 317 aa13.47□□□□□ -0.25
RBFOX1-208ENST00000547372 MYBL2P10244 700 aa13.47□□□□□ -0.25
RBFOX1-208ENST00000547372 RBL2Q08999 1139 aa13.47□□□□□ -0.25
RBFOX1-208ENST00000547372 KCNB1Q14721 858 aa13.47□□□□□ -0.25
RBFOX1-208ENST00000547372 MICALCLQ6ZW33 695 aa13.47□□□□□ -0.25
RBFOX1-208ENST00000547372 CCDC13Q8IYE1 715 aa13.47□□□□□ -0.25
RBFOX1-208ENST00000547372 NSUN7Q8NE18 718 aaKnown RBP13.47□□□□□ -0.25
RBFOX1-208ENST00000547372 SAMSN1Q9NSI8 373 aaKnown RBP13.47□□□□□ -0.25
RBFOX1-208ENST00000547372 TRIM10Q9UDY6 481 aa13.47□□□□□ -0.25
RBFOX1-208ENST00000547372 PTPRMP28827 1452 aa13.47□□□□□ -0.25
RBFOX1-208ENST00000547372 BACH1O14867 736 aa13.47□□□□□ -0.25
RBFOX1-208ENST00000547372 CCDC121Q6ZUS5 278 aa13.47□□□□□ -0.25
RBFOX1-208ENST00000547372 MSL3Q8N5Y2 521 aaKnown RBP13.47□□□□□ -0.25
RBFOX1-208ENST00000547372 RSRC1Q96IZ7 334 aaKnown RBP13.47□□□□□ -0.25
RBFOX1-208ENST00000547372 A0A1W2PQ27 194 aa13.47□□□□□ -0.25
RBFOX1-208ENST00000547372 A0A1W2PQ64 194 aa13.47□□□□□ -0.25
RBFOX1-208ENST00000547372 A0A1W2PQD8 194 aa13.47□□□□□ -0.25
RBFOX1-208ENST00000547372 TEX33O43247 280 aa13.47□□□□□ -0.25
RBFOX1-208ENST00000547372 IPO7O95373 1038 aaKnown RBP13.47□□□□□ -0.25
RBFOX1-208ENST00000547372 CSB-PGBD3P0DP91 1061 aa13.47□□□□□ -0.25
RBFOX1-208ENST00000547372 FKBP4Q02790 459 aaKnown RBP eCLIP13.47□□□□□ -0.25
RBFOX1-208ENST00000547372 SMARCC2Q8TAQ2 1214 aa13.47□□□□□ -0.25
RBFOX1-208ENST00000547372 HAUS2Q9NVX0 235 aa13.47□□□□□ -0.25
RBFOX1-208ENST00000547372 WASLO00401 505 aaPredicted RBP13.46□□□□□ -0.25
RBFOX1-208ENST00000547372 DDX58O95786 925 aaKnown RBP13.46□□□□□ -0.25
RBFOX1-208ENST00000547372 HPDP32754 393 aaPredicted RBP13.46□□□□□ -0.25
RBFOX1-208ENST00000547372 PDE4BQ07343 736 aa13.46□□□□□ -0.25
RBFOX1-208ENST00000547372 ZNF513Q8N8E2 541 aaPredicted RBP13.46□□□□□ -0.25
RBFOX1-208ENST00000547372 LINC00301Q8NCQ3 95 aa13.46□□□□□ -0.25
RBFOX1-208ENST00000547372 SPDYE1Q8NFV5 336 aaPredicted RBP13.46□□□□□ -0.25
RBFOX1-208ENST00000547372 MMS19Q96T76 1030 aa13.46□□□□□ -0.25
RBFOX1-208ENST00000547372 MAP3K2Q9Y2U5 619 aa13.46□□□□□ -0.25
RBFOX1-208ENST00000547372 E7EVH7 732 aa13.46□□□□□ -0.25
RBFOX1-208ENST00000547372 FOXN1O15353 648 aa13.46□□□□□ -0.25
RBFOX1-208ENST00000547372 INHBEP58166 350 aa13.46□□□□□ -0.25
RBFOX1-208ENST00000547372 THEMIS2Q5TEJ8 643 aa13.46□□□□□ -0.25
RBFOX1-208ENST00000547372 PARP9Q8IXQ6 854 aa13.46□□□□□ -0.25
RBFOX1-208ENST00000547372 ARL8AQ96BM9 186 aa13.46□□□□□ -0.25
RBFOX1-208ENST00000547372 RRP36Q96EU6 259 aaKnown RBP13.46□□□□□ -0.25
RBFOX1-208ENST00000547372 PSMB7Q99436 277 aa13.46□□□□□ -0.25
RBFOX1-208ENST00000547372 SH3GL3Q99963 347 aa13.46□□□□□ -0.25
RBFOX1-208ENST00000547372 JADE2Q9NQC1 790 aa13.46□□□□□ -0.25
RBFOX1-208ENST00000547372 PCDHA5Q9Y5H7 936 aa13.46□□□□□ -0.25
RBFOX1-208ENST00000547372 NPHP4O75161 1426 aaPredicted RBP13.46□□□□□ -0.26
RBFOX1-208ENST00000547372 FNTAP49354 379 aa13.46□□□□□ -0.26
RBFOX1-208ENST00000547372 SLC7A5Q01650 507 aa13.46□□□□□ -0.26
RBFOX1-208ENST00000547372 DDR1Q08345 913 aa13.46□□□□□ -0.26
RBFOX1-208ENST00000547372 CCDC70Q6NSX1 233 aa13.46□□□□□ -0.26
RBFOX1-208ENST00000547372 LLPHQ9BRT6 129 aaKnown RBP13.46□□□□□ -0.26
RBFOX1-208ENST00000547372 CDC27P30260 824 aa13.45□□□□□ -0.26
RBFOX1-208ENST00000547372 RBBP5Q15291 538 aaKnown RBP13.45□□□□□ -0.26
RBFOX1-208ENST00000547372 WHAMMP3Q1A5X7 153 aa13.45□□□□□ -0.26
RBFOX1-208ENST00000547372 SAAL1Q96ER3 474 aa13.45□□□□□ -0.26
RBFOX1-208ENST00000547372 ETAA1Q9NY74 926 aa13.45□□□□□ -0.26
RBFOX1-208ENST00000547372 BUB1BO60566 1050 aaPredicted RBP13.45□□□□□ -0.26
RBFOX1-208ENST00000547372 CASP14P31944 242 aa13.45□□□□□ -0.26
RBFOX1-208ENST00000547372 MYO1EQ12965 1108 aa13.45□□□□□ -0.26
RBFOX1-208ENST00000547372 C1orf141Q5JVX7 400 aa13.45□□□□□ -0.26
RBFOX1-208ENST00000547372 KCNG4Q8TDN1 519 aa13.45□□□□□ -0.26
RBFOX1-208ENST00000547372 RTEL1Q9NZ71 1219 aa13.45□□□□□ -0.26
RBFOX1-208ENST00000547372 KLHL33A6NCF5 533 aa13.44□□□□□ -0.26
RBFOX1-208ENST00000547372 AGPSO00116 658 aa13.44□□□□□ -0.26
RBFOX1-208ENST00000547372 ACCSLQ4AC99 568 aa13.44□□□□□ -0.26
RBFOX1-208ENST00000547372 FILIP1LQ4L180 1135 aa13.44□□□□□ -0.26
RBFOX1-208ENST00000547372 ILDR1Q86SU0 546 aaPredicted RBP13.44□□□□□ -0.26
RBFOX1-208ENST00000547372 NUP133Q8WUM0 1156 aa13.44□□□□□ -0.26
RBFOX1-208ENST00000547372 OPLAHO14841 1288 aa13.44□□□□□ -0.26
RBFOX1-208ENST00000547372 KRT14P02533 472 aa13.44□□□□□ -0.26
RBFOX1-208ENST00000547372 APBA1Q02410 837 aa13.44□□□□□ -0.26
RBFOX1-208ENST00000547372 PNMA8AQ86V59 439 aaPredicted RBP13.44□□□□□ -0.26
RBFOX1-208ENST00000547372 USP14P54578 494 aa13.44□□□□□ -0.26
RBFOX1-208ENST00000547372 NUP88Q99567 741 aaPredicted RBP13.44□□□□□ -0.26
RBFOX1-208ENST00000547372 TACO1Q9BSH4 297 aaKnown RBP13.44□□□□□ -0.26
RBFOX1-208ENST00000547372 NUCKS1Q9H1E3 243 aaKnown RBP13.44□□□□□ -0.26
RBFOX1-208ENST00000547372 EDC4Q6P2E9 1401 aaKnown RBP13.44□□□□□ -0.26
RBFOX1-208ENST00000547372 POGZQ7Z3K3 1410 aa13.43□□□□□ -0.26
RBFOX1-208ENST00000547372 GOLGA8BA8MQT2 603 aa13.43□□□□□ -0.26
RBFOX1-208ENST00000547372 ZNF185O15231 689 aa13.43□□□□□ -0.26
RBFOX1-208ENST00000547372 TAF5LO75529 589 aa13.43□□□□□ -0.26
RBFOX1-208ENST00000547372 CTDNEP1O95476 244 aa13.43□□□□□ -0.26
RBFOX1-208ENST00000547372 CCT6AP40227 531 aaKnown RBP13.43□□□□□ -0.26
RBFOX1-208ENST00000547372 TUBB4BP68371 445 aa13.43□□□□□ -0.26
RBFOX1-208ENST00000547372 CYB5D1Q6P9G0 228 aa13.43□□□□□ -0.26
RBFOX1-208ENST00000547372 AMOTL1Q8IY63 956 aa13.43□□□□□ -0.26
RBFOX1-208ENST00000547372 A1CFQ9NQ94 594 aaKnown RBP13.43□□□□□ -0.26
RBFOX1-208ENST00000547372 BTBD11A6QL63 1104 aa13.43□□□□□ -0.26
RBFOX1-208ENST00000547372 TUBBP07437 444 aa13.43□□□□□ -0.26
RBFOX1-208ENST00000547372 AARSP49588 968 aaKnown RBP eCLIP13.43□□□□□ -0.26
RBFOX1-208ENST00000547372 C2orf54Q08AI8 447 aa13.43□□□□□ -0.26
RBFOX1-208ENST00000547372 LMTK2Q8IWU2 1503 aa13.43□□□□□ -0.26
RBFOX1-208ENST00000547372 CDC25AP30304 524 aa13.43□□□□□ -0.26
RBFOX1-208ENST00000547372 HDLBPQ00341 1268 aaKnown RBP13.43□□□□□ -0.26
RBFOX1-208ENST00000547372 MPRIPQ6WCQ1 1025 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms