RNA–Protein interactions for RNA: ENST00000547063.5

TRAFD1-203, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 3

Gene TRAFD1, Length 867 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-203ENST00000547063 ANP32AP39687 249 aaKnown RBP18.73■□□□□ 0.59
TRAFD1-203ENST00000547063 ADCK5Q3MIX3 580 aa18.73■□□□□ 0.59
TRAFD1-203ENST00000547063 TBC1D10CQ8IV04 446 aa18.73■□□□□ 0.59
TRAFD1-203ENST00000547063 ESR2Q92731 530 aa18.73■□□□□ 0.59
TRAFD1-203ENST00000547063 HOOK2Q96ED9 719 aa18.73■□□□□ 0.59
TRAFD1-203ENST00000547063 NBPF3Q9H094 633 aa18.73■□□□□ 0.59
TRAFD1-203ENST00000547063 TOMM22Q9NS69 142 aa18.73■□□□□ 0.59
TRAFD1-203ENST00000547063 SWAP70Q9UH65 585 aa18.73■□□□□ 0.59
TRAFD1-203ENST00000547063 RBM19Q9Y4C8 960 aaKnown RBP18.73■□□□□ 0.59
TRAFD1-203ENST00000547063 CNTNAP1P78357 1384 aa18.72■□□□□ 0.59
TRAFD1-203ENST00000547063 ORC4O43929 436 aa18.72■□□□□ 0.59
TRAFD1-203ENST00000547063 CYP2D6P10635 497 aa18.72■□□□□ 0.59
TRAFD1-203ENST00000547063 PLCD1P51178 756 aa18.72■□□□□ 0.59
TRAFD1-203ENST00000547063 NEK4P51957 841 aa18.72■□□□□ 0.59
TRAFD1-203ENST00000547063 ANGEL2Q5VTE6 544 aaKnown RBP18.72■□□□□ 0.59
TRAFD1-203ENST00000547063 STOX1Q6ZVD7 989 aa18.72■□□□□ 0.59
TRAFD1-203ENST00000547063 C16orf86Q6ZW13 317 aa18.72■□□□□ 0.59
TRAFD1-203ENST00000547063 RUFY3Q7L099 469 aa18.72■□□□□ 0.59
TRAFD1-203ENST00000547063 CRACR2BQ8N4Y2 399 aaPredicted RBP18.72■□□□□ 0.59
TRAFD1-203ENST00000547063 DCPSQ96C86 337 aaKnown RBP18.72■□□□□ 0.59
TRAFD1-203ENST00000547063 TAF1DQ9H5J8 278 aaPredicted RBP18.72■□□□□ 0.59
TRAFD1-203ENST00000547063 MKNK2Q9HBH9 465 aa18.72■□□□□ 0.59
TRAFD1-203ENST00000547063 GGA3Q9NZ52 723 aa18.72■□□□□ 0.59
TRAFD1-203ENST00000547063 HERC5Q9UII4 1024 aaKnown RBP18.72■□□□□ 0.59
TRAFD1-203ENST00000547063 WDR19Q8NEZ3 1342 aa18.72■□□□□ 0.59
TRAFD1-203ENST00000547063 VEGFAP15692 232 aaPredicted RBP18.71■□□□□ 0.59
TRAFD1-203ENST00000547063 MCM5P33992 734 aa18.71■□□□□ 0.59
TRAFD1-203ENST00000547063 HIRAP54198 1017 aaPredicted RBP18.71■□□□□ 0.59
TRAFD1-203ENST00000547063 RASA3Q14644 834 aa18.71■□□□□ 0.59
TRAFD1-203ENST00000547063 DHX32Q7L7V1 743 aaKnown RBP18.71■□□□□ 0.59
TRAFD1-203ENST00000547063 CSRNP1Q96S65 589 aa18.71■□□□□ 0.59
TRAFD1-203ENST00000547063 MTA3Q9BTC8 594 aa18.71■□□□□ 0.59
TRAFD1-203ENST00000547063 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.71■□□□□ 0.59
TRAFD1-203ENST00000547063 TAF6LQ9Y6J9 622 aa18.71■□□□□ 0.59
TRAFD1-203ENST00000547063 DDTLA6NHG4 134 aaPredicted RBP18.7■□□□□ 0.58
TRAFD1-203ENST00000547063 RPS6KB1P23443 525 aa18.7■□□□□ 0.58
TRAFD1-203ENST00000547063 SLC4A8Q2Y0W8 1093 aa18.7■□□□□ 0.58
TRAFD1-203ENST00000547063 ZFPM1Q8IX07 1006 aa18.7■□□□□ 0.58
TRAFD1-203ENST00000547063 ZNF444Q8N0Y2 327 aaPredicted RBP18.7■□□□□ 0.58
TRAFD1-203ENST00000547063 DEFB129Q9H1M3 183 aa18.7■□□□□ 0.58
TRAFD1-203ENST00000547063 CDK8P49336 464 aa18.69■□□□□ 0.58
TRAFD1-203ENST00000547063 MCM2P49736 904 aa18.69■□□□□ 0.58
TRAFD1-203ENST00000547063 GABPAQ06546 454 aa18.69■□□□□ 0.58
TRAFD1-203ENST00000547063 SART3Q15020 963 aaKnown RBP18.69■□□□□ 0.58
TRAFD1-203ENST00000547063 ANKRD1Q15327 319 aa18.69■□□□□ 0.58
TRAFD1-203ENST00000547063 RRP12Q5JTH9 1297 aaKnown RBP18.69■□□□□ 0.58
TRAFD1-203ENST00000547063 METTL16Q86W50 562 aaKnown RBP18.69■□□□□ 0.58
TRAFD1-203ENST00000547063 SULF1Q8IWU6 871 aa18.69■□□□□ 0.58
TRAFD1-203ENST00000547063 MB21D2Q8IYB1 491 aaPredicted RBP18.69■□□□□ 0.58
TRAFD1-203ENST00000547063 UPF3BQ9BZI7 483 aaKnown RBP18.69■□□□□ 0.58
TRAFD1-203ENST00000547063 ALDH8A1Q9H2A2 487 aaPredicted RBP18.69■□□□□ 0.58
TRAFD1-203ENST00000547063 PDRG1Q9NUG6 133 aa18.69■□□□□ 0.58
TRAFD1-203ENST00000547063 NEDD4P46934 1319 aa18.69■□□□□ 0.58
TRAFD1-203ENST00000547063 B4E1Z4 1266 aa18.68■□□□□ 0.58
TRAFD1-203ENST00000547063 TBC1D12O60347 775 aa18.68■□□□□ 0.58
TRAFD1-203ENST00000547063 KDM4AO75164 1064 aa18.68■□□□□ 0.58
TRAFD1-203ENST00000547063 FGD1P98174 961 aa18.68■□□□□ 0.58
TRAFD1-203ENST00000547063 CCDC178Q5BJE1 867 aa18.68■□□□□ 0.58
TRAFD1-203ENST00000547063 SH3BP5LQ7L8J4 393 aa18.68■□□□□ 0.58
TRAFD1-203ENST00000547063 IQCA1Q86XH1 822 aa18.68■□□□□ 0.58
TRAFD1-203ENST00000547063 DYNLL2Q96FJ2 89 aa18.68■□□□□ 0.58
TRAFD1-203ENST00000547063 CCDC17Q96LX7 622 aa18.68■□□□□ 0.58
TRAFD1-203ENST00000547063 TMEM39BQ9GZU3 492 aa18.68■□□□□ 0.58
TRAFD1-203ENST00000547063 PGAP2Q9UHJ9 254 aa18.68■□□□□ 0.58
TRAFD1-203ENST00000547063 MYH8P13535 1937 aa18.67■□□□□ 0.58
TRAFD1-203ENST00000547063 POTECB2RU33 542 aa18.67■□□□□ 0.58
TRAFD1-203ENST00000547063 RANBP6O60518 1105 aaKnown RBP18.67■□□□□ 0.58
TRAFD1-203ENST00000547063 EXOSC10Q01780 885 aaKnown RBP18.67■□□□□ 0.58
TRAFD1-203ENST00000547063 EAPPQ56P03 285 aaPredicted RBP18.67■□□□□ 0.58
TRAFD1-203ENST00000547063 STK11IPQ8N1F8 1099 aa18.67■□□□□ 0.58
TRAFD1-203ENST00000547063 TMEM87BQ96K49 555 aa18.67■□□□□ 0.58
TRAFD1-203ENST00000547063 ASTN2O75129 1339 aaPredicted RBP18.67■□□□□ 0.58
TRAFD1-203ENST00000547063 ERICH2A1L162 156 aa18.66■□□□□ 0.58
TRAFD1-203ENST00000547063 TSPY2A6NKD2 308 aa18.66■□□□□ 0.58
TRAFD1-203ENST00000547063 PRC1O43663 620 aa18.66■□□□□ 0.58
TRAFD1-203ENST00000547063 PRDM1O75626 825 aa18.66■□□□□ 0.58
TRAFD1-203ENST00000547063 BECN1Q14457 450 aa18.66■□□□□ 0.58
TRAFD1-203ENST00000547063 SUPT20HL1Q3ZLR7 823 aa18.66■□□□□ 0.58
TRAFD1-203ENST00000547063 PPP4R3BQ5MIZ7 849 aa18.66■□□□□ 0.58
TRAFD1-203ENST00000547063 DCAF15Q66K64 600 aa18.66■□□□□ 0.58
TRAFD1-203ENST00000547063 FBXL16Q8N461 479 aa18.66■□□□□ 0.58
TRAFD1-203ENST00000547063 SNX21Q969T3 373 aa18.66■□□□□ 0.58
TRAFD1-203ENST00000547063 UBAC1Q9BSL1 405 aa18.66■□□□□ 0.58
TRAFD1-203ENST00000547063 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.66■□□□□ 0.58
TRAFD1-203ENST00000547063 ZSWIM5Q9P217 1185 aa18.66■□□□□ 0.58
TRAFD1-203ENST00000547063 TSPY3P0CV98 308 aa18.65■□□□□ 0.58
TRAFD1-203ENST00000547063 TSPY8P0CW00 308 aa18.65■□□□□ 0.58
TRAFD1-203ENST00000547063 RASA1P20936 1047 aa18.65■□□□□ 0.58
TRAFD1-203ENST00000547063 MAP3K10Q02779 954 aa18.65■□□□□ 0.58
TRAFD1-203ENST00000547063 KRT26Q7Z3Y9 468 aa18.65■□□□□ 0.58
TRAFD1-203ENST00000547063 TMTC2Q8N394 836 aa18.65■□□□□ 0.58
TRAFD1-203ENST00000547063 TEPSINQ96N21 525 aa18.65■□□□□ 0.58
TRAFD1-203ENST00000547063 TTC14Q96N46 770 aa18.65■□□□□ 0.58
TRAFD1-203ENST00000547063 RRAGCQ9HB90 399 aa18.65■□□□□ 0.58
TRAFD1-203ENST00000547063 INCENPQ9NQS7 918 aa18.65■□□□□ 0.58
TRAFD1-203ENST00000547063 TACC3Q9Y6A5 838 aa18.65■□□□□ 0.58
TRAFD1-203ENST00000547063 SIPA1L1O43166 1804 aa18.65■□□□□ 0.58
TRAFD1-203ENST00000547063 SMIM22K7EJ46 135 aa18.64■□□□□ 0.57
TRAFD1-203ENST00000547063 TFAP4Q01664 338 aa18.64■□□□□ 0.57
TRAFD1-203ENST00000547063 EVX2Q03828 476 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms