RNA–Protein interactions for RNA: ENST00000546983.1

NKX2-1-205, Transcript of NK2 homeobox 1, humanhuman

TSL 4

Gene NKX2-1, Length 653 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-205ENST00000546983 POLR3DP05423 398 aaPredicted RBP30.56■■■□□ 2.48
NKX2-1-205ENST00000546983 OTUD7BQ6GQQ9 843 aa30.56■■■□□ 2.48
NKX2-1-205ENST00000546983 ARMT1Q9H993 441 aa30.56■■■□□ 2.48
NKX2-1-205ENST00000546983 ELP3Q9H9T3 547 aa30.56■■■□□ 2.48
NKX2-1-205ENST00000546983 SAGE1Q9NXZ1 904 aa30.56■■■□□ 2.48
NKX2-1-205ENST00000546983 PALD1Q9ULE6 856 aa30.56■■■□□ 2.48
NKX2-1-205ENST00000546983 PHF20L1A8MW92 1017 aa30.55■■■□□ 2.48
NKX2-1-205ENST00000546983 HIP1O00291 1037 aa30.55■■■□□ 2.48
NKX2-1-205ENST00000546983 TM4SF4P48230 202 aa30.55■■■□□ 2.48
NKX2-1-205ENST00000546983 GTF2A2P52657 109 aa30.55■■■□□ 2.48
NKX2-1-205ENST00000546983 SCYL3Q8IZE3 742 aa30.55■■■□□ 2.48
NKX2-1-205ENST00000546983 OPTNQ96CV9 577 aa30.55■■■□□ 2.48
NKX2-1-205ENST00000546983 PUS7LQ9H0K6 701 aaKnown RBP30.55■■■□□ 2.48
NKX2-1-205ENST00000546983 DCP1AQ9NPI6 582 aaPredicted RBP30.55■■■□□ 2.48
NKX2-1-205ENST00000546983 SERPINB13Q9UIV8 391 aa30.55■■■□□ 2.48
NKX2-1-205ENST00000546983 SNCAIPQ9Y6H5 919 aa30.55■■■□□ 2.48
NKX2-1-205ENST00000546983 HSPA1AP0DMV8 641 aaKnown RBP30.54■■■□□ 2.48
NKX2-1-205ENST00000546983 HSPA1BP0DMV9 641 aaKnown RBP30.54■■■□□ 2.48
NKX2-1-205ENST00000546983 PPIL2Q13356 520 aa30.54■■■□□ 2.48
NKX2-1-205ENST00000546983 CCDC136Q96JN2 1154 aa30.54■■■□□ 2.48
NKX2-1-205ENST00000546983 MCM9Q9NXL9 1143 aa30.54■■■□□ 2.48
NKX2-1-205ENST00000546983 SLC4A4Q9Y6R1 1079 aa30.54■■■□□ 2.48
NKX2-1-205ENST00000546983 INPP5BP32019 993 aa30.53■■■□□ 2.48
NKX2-1-205ENST00000546983 ZMYM1Q5SVZ6 1142 aa30.53■■■□□ 2.48
NKX2-1-205ENST00000546983 ZKSCAN4Q969J2 545 aaPredicted RBP30.53■■■□□ 2.48
NKX2-1-205ENST00000546983 STRBPQ96SI9 672 aaKnown RBP30.53■■■□□ 2.48
NKX2-1-205ENST00000546983 HELLSQ9NRZ9 838 aa30.53■■■□□ 2.48
NKX2-1-205ENST00000546983 MYH7P12883 1935 aa30.52■■■□□ 2.48
NKX2-1-205ENST00000546983 OSBP2Q969R2 916 aa30.52■■■□□ 2.48
NKX2-1-205ENST00000546983 NACAP1Q9BZK3 213 aa30.52■■■□□ 2.48
NKX2-1-205ENST00000546983 SAP30BPQ9UHR5 308 aaKnown RBP30.52■■■□□ 2.48
NKX2-1-205ENST00000546983 FOCADQ5VW36 1801 aa30.52■■■□□ 2.48
NKX2-1-205ENST00000546983 CTCFP49711 727 aaPredicted RBP30.51■■■□□ 2.47
NKX2-1-205ENST00000546983 MFAP1P55081 439 aaKnown RBP30.51■■■□□ 2.47
NKX2-1-205ENST00000546983 RILPL2Q969X0 211 aa30.51■■■□□ 2.47
NKX2-1-205ENST00000546983 ARPP21Q9UBL0 812 aaPredicted RBP30.51■■■□□ 2.47
NKX2-1-205ENST00000546983 GPAA1O43292 621 aa30.5■■■□□ 2.47
NKX2-1-205ENST00000546983 ASNSP08243 561 aa30.5■■■□□ 2.47
NKX2-1-205ENST00000546983 SNAPC2Q13487 334 aa30.5■■■□□ 2.47
NKX2-1-205ENST00000546983 SDR42E1Q8WUS8 393 aa30.5■■■□□ 2.47
NKX2-1-205ENST00000546983 OTUD5Q96G74 571 aa30.5■■■□□ 2.47
NKX2-1-205ENST00000546983 SWAP70Q9UH65 585 aa30.5■■■□□ 2.47
NKX2-1-205ENST00000546983 CETPP11597 493 aa30.49■■■□□ 2.47
NKX2-1-205ENST00000546983 CAP2P40123 477 aa30.49■■■□□ 2.47
NKX2-1-205ENST00000546983 TESPA1A2RU30 521 aaPredicted RBP30.48■■■□□ 2.47
NKX2-1-205ENST00000546983 CXCL11O14625 94 aa30.48■■■□□ 2.47
NKX2-1-205ENST00000546983 PATL2C9JE40 543 aaKnown RBP30.47■■■□□ 2.47
NKX2-1-205ENST00000546983 AS3MTQ9HBK9 375 aa30.47■■■□□ 2.47
NKX2-1-205ENST00000546983 ZCCHC17Q9NP64 241 aaKnown RBP30.47■■■□□ 2.47
NKX2-1-205ENST00000546983 ZBTB4Q9P1Z0 1013 aaPredicted RBP30.47■■■□□ 2.47
NKX2-1-205ENST00000546983 PTPRAP18433 802 aa30.46■■■□□ 2.47
NKX2-1-205ENST00000546983 SBK1Q52WX2 424 aa30.46■■■□□ 2.47
NKX2-1-205ENST00000546983 TTC22Q5TAA0 569 aa30.46■■■□□ 2.47
NKX2-1-205ENST00000546983 TATDN1Q6P1N9 297 aa30.46■■■□□ 2.47
NKX2-1-205ENST00000546983 ZNF287Q9HBT7 754 aa30.46■■■□□ 2.47
NKX2-1-205ENST00000546983 KCNH4Q9UQ05 1017 aa30.46■■■□□ 2.47
NKX2-1-205ENST00000546983 MKRN3Q13064 507 aaKnown RBP30.45■■■□□ 2.47
NKX2-1-205ENST00000546983 SLFNL1Q499Z3 407 aa30.45■■■□□ 2.47
NKX2-1-205ENST00000546983 MCMDC2Q4G0Z9 681 aa30.45■■■□□ 2.47
NKX2-1-205ENST00000546983 ZIC5Q96T25 663 aa30.45■■■□□ 2.47
NKX2-1-205ENST00000546983 OTOFQ9HC10 1997 aa30.45■■■□□ 2.46
NKX2-1-205ENST00000546983 PRKAB2O43741 272 aa30.44■■■□□ 2.46
NKX2-1-205ENST00000546983 APPP05067 770 aa30.44■■■□□ 2.46
NKX2-1-205ENST00000546983 PDE4AP27815 886 aa30.44■■■□□ 2.46
NKX2-1-205ENST00000546983 CFHR5Q9BXR6 569 aa30.44■■■□□ 2.46
NKX2-1-205ENST00000546983 DIAPH3Q9NSV4 1193 aa30.44■■■□□ 2.46
NKX2-1-205ENST00000546983 USP17L5A8MUK1 530 aa30.43■■■□□ 2.46
NKX2-1-205ENST00000546983 GSG1L2A8MUP6 293 aa30.43■■■□□ 2.46
NKX2-1-205ENST00000546983 IRF6O14896 467 aa30.43■■■□□ 2.46
NKX2-1-205ENST00000546983 GJA5P36382 358 aa30.43■■■□□ 2.46
NKX2-1-205ENST00000546983 C12orf60Q5U649 245 aa30.43■■■□□ 2.46
NKX2-1-205ENST00000546983 IFNL1Q8IU54 200 aa30.43■■■□□ 2.46
NKX2-1-205ENST00000546983 MS4A4AQ96JQ5 239 aa30.43■■■□□ 2.46
NKX2-1-205ENST00000546983 CDK5RAP2Q96SN8 1893 aa30.43■■■□□ 2.46
NKX2-1-205ENST00000546983 CABP5Q9NP86 173 aa30.43■■■□□ 2.46
NKX2-1-205ENST00000546983 RNF186Q9NXI6 227 aa30.43■■■□□ 2.46
NKX2-1-205ENST00000546983 ZHX2Q9Y6X8 837 aa30.43■■■□□ 2.46
NKX2-1-205ENST00000546983 USP17L12C9JPN9 530 aa30.42■■■□□ 2.46
NKX2-1-205ENST00000546983 USP17L21D6R901 530 aa30.42■■■□□ 2.46
NKX2-1-205ENST00000546983 SDSP20132 328 aa30.42■■■□□ 2.46
NKX2-1-205ENST00000546983 TDO2P48775 406 aa30.42■■■□□ 2.46
NKX2-1-205ENST00000546983 PLCD1P51178 756 aa30.42■■■□□ 2.46
NKX2-1-205ENST00000546983 GABPAQ06546 454 aa30.42■■■□□ 2.46
NKX2-1-205ENST00000546983 CERKLQ49MI3 558 aaPredicted RBP30.42■■■□□ 2.46
NKX2-1-205ENST00000546983 FASTKD5Q7L8L6 764 aaKnown RBP30.42■■■□□ 2.46
NKX2-1-205ENST00000546983 CCDC17Q96LX7 622 aa30.42■■■□□ 2.46
NKX2-1-205ENST00000546983 PRDM10Q9NQV6 1147 aa30.42■■■□□ 2.46
NKX2-1-205ENST00000546983 CCL15-CCL14A0A0B4J2E2 113 aa30.41■■■□□ 2.46
NKX2-1-205ENST00000546983 M0R2C6 588 aa30.41■■■□□ 2.46
NKX2-1-205ENST00000546983 CHGBP05060 677 aa30.41■■■□□ 2.46
NKX2-1-205ENST00000546983 SLC3A2P08195 630 aaKnown RBP30.41■■■□□ 2.46
NKX2-1-205ENST00000546983 CCL15Q16663 113 aa30.41■■■□□ 2.46
NKX2-1-205ENST00000546983 DNAJC18Q9H819 358 aa30.41■■■□□ 2.46
NKX2-1-205ENST00000546983 MYH1P12882 1939 aa30.41■■■□□ 2.46
NKX2-1-205ENST00000546983 FAM196BA6NMK8 535 aa30.4■■■□□ 2.46
NKX2-1-205ENST00000546983 FOXN1O15353 648 aa30.4■■■□□ 2.46
NKX2-1-205ENST00000546983 NOM1Q5C9Z4 860 aaKnown RBP30.4■■■□□ 2.46
NKX2-1-205ENST00000546983 CTR9Q6PD62 1173 aa30.4■■■□□ 2.46
NKX2-1-205ENST00000546983 AFG3L2Q9Y4W6 797 aa30.4■■■□□ 2.46
NKX2-1-205ENST00000546983 RUFY2Q8WXA3 655 aa30.39■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms