RNA–Protein interactions for RNA: ENST00000546898.1

DDX54-204, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-204ENST00000546898 ZNF532Q9HCE3 1301 aa19.25■□□□□ 0.67
DDX54-204ENST00000546898 ZNF296Q8WUU4 475 aaPredicted RBP19.25■□□□□ 0.67
DDX54-204ENST00000546898 GCC1Q96CN9 775 aa19.25■□□□□ 0.67
DDX54-204ENST00000546898 EDC3Q96F86 508 aaKnown RBP19.25■□□□□ 0.67
DDX54-204ENST00000546898 TTC41PQ6P2S7 1318 aa19.25■□□□□ 0.67
DDX54-204ENST00000546898 MAGEB6P1A0A0J9YX57 407 aa19.24■□□□□ 0.67
DDX54-204ENST00000546898 TCRBV5S4A2TA0A5A2 114 aa19.24■□□□□ 0.67
DDX54-204ENST00000546898 HLA-DOAP06340 250 aa19.24■□□□□ 0.67
DDX54-204ENST00000546898 USP5P45974 858 aa19.24■□□□□ 0.67
DDX54-204ENST00000546898 FAM196BA6NMK8 535 aa19.23■□□□□ 0.67
DDX54-204ENST00000546898 CXCL11O14625 94 aa19.23■□□□□ 0.67
DDX54-204ENST00000546898 FKTNO75072 461 aa19.23■□□□□ 0.67
DDX54-204ENST00000546898 SLURP2P0DP57 97 aa19.23■□□□□ 0.67
DDX54-204ENST00000546898 PTPRAP18433 802 aa19.23■□□□□ 0.67
DDX54-204ENST00000546898 ADD2P35612 726 aa19.23■□□□□ 0.67
DDX54-204ENST00000546898 CRHR2Q13324 411 aa19.23■□□□□ 0.67
DDX54-204ENST00000546898 ZSCAN25Q6NSZ9 544 aa19.23■□□□□ 0.67
DDX54-204ENST00000546898 CTU1Q7Z7A3 348 aaKnown RBP19.23■□□□□ 0.67
DDX54-204ENST00000546898 METTL16Q86W50 562 aaKnown RBP19.23■□□□□ 0.67
DDX54-204ENST00000546898 FOXP4Q8IVH2 680 aaPredicted RBP19.23■□□□□ 0.67
DDX54-204ENST00000546898 CRNKL1Q9BZJ0 848 aaKnown RBP19.23■□□□□ 0.67
DDX54-204ENST00000546898 ZBTB47Q9UFB7 747 aaPredicted RBP19.23■□□□□ 0.67
DDX54-204ENST00000546898 LOC285556D6RIA3 1793 aa19.22■□□□□ 0.67
DDX54-204ENST00000546898 MYH8P13535 1937 aa19.22■□□□□ 0.67
DDX54-204ENST00000546898 DGKZQ13574 1117 aa19.22■□□□□ 0.67
DDX54-204ENST00000546898 TAF1CQ15572 869 aaPredicted RBP19.22■□□□□ 0.67
DDX54-204ENST00000546898 FAM43AQ8N2R8 423 aa19.22■□□□□ 0.67
DDX54-204ENST00000546898 TRIM34Q9BYJ4 488 aa19.22■□□□□ 0.67
DDX54-204ENST00000546898 TBC1D2Q9BYX2 928 aa19.22■□□□□ 0.67
DDX54-204ENST00000546898 MCOLN1Q9GZU1 580 aa19.22■□□□□ 0.67
DDX54-204ENST00000546898 R3HDMLQ9H3Y0 253 aa19.22■□□□□ 0.67
DDX54-204ENST00000546898 PALD1Q9ULE6 856 aa19.22■□□□□ 0.67
DDX54-204ENST00000546898 ERC2O15083 957 aa19.21■□□□□ 0.67
DDX54-204ENST00000546898 CAP2P40123 477 aa19.21■□□□□ 0.67
DDX54-204ENST00000546898 UBE3CQ15386 1083 aa19.21■□□□□ 0.67
DDX54-204ENST00000546898 ANKRD23Q86SG2 305 aa19.21■□□□□ 0.67
DDX54-204ENST00000546898 CRACR2BQ8N4Y2 399 aaPredicted RBP19.21■□□□□ 0.67
DDX54-204ENST00000546898 EHD4Q9H223 541 aa19.21■□□□□ 0.67
DDX54-204ENST00000546898 ZFYVE28Q9HCC9 887 aa19.21■□□□□ 0.67
DDX54-204ENST00000546898 ZHX2Q9Y6X8 837 aa19.21■□□□□ 0.67
DDX54-204ENST00000546898 BAZ2AQ9UIF9 1905 aaKnown RBP19.21■□□□□ 0.67
DDX54-204ENST00000546898 BTBD19C9JJ37 291 aa19.2■□□□□ 0.66
DDX54-204ENST00000546898 TTC6Q86TZ1 520 aa19.2■□□□□ 0.66
DDX54-204ENST00000546898 ABHD8Q96I13 439 aa19.2■□□□□ 0.66
DDX54-204ENST00000546898 DNAJC18Q9H819 358 aa19.2■□□□□ 0.66
DDX54-204ENST00000546898 GINM1Q9NU53 330 aa19.2■□□□□ 0.66
DDX54-204ENST00000546898 SAP30BPQ9UHR5 308 aaKnown RBP19.2■□□□□ 0.66
DDX54-204ENST00000546898 AFG3L2Q9Y4W6 797 aa19.2■□□□□ 0.66
DDX54-204ENST00000546898 SUPT16HQ9Y5B9 1047 aaKnown RBP19.2■□□□□ 0.66
DDX54-204ENST00000546898 A0A0G2JLL6 359 aaPredicted RBP19.19■□□□□ 0.66
DDX54-204ENST00000546898 PRRT2Q7Z6L0 340 aaPredicted RBP19.19■□□□□ 0.66
DDX54-204ENST00000546898 LCORLQ8N3X6 602 aa19.19■□□□□ 0.66
DDX54-204ENST00000546898 KBTBD3Q8NAB2 608 aa19.19■□□□□ 0.66
DDX54-204ENST00000546898 EXOC6Q8TAG9 804 aa19.19■□□□□ 0.66
DDX54-204ENST00000546898 GLRX3O76003 335 aaKnown RBP19.18■□□□□ 0.66
DDX54-204ENST00000546898 MX1P20591 662 aa19.18■□□□□ 0.66
DDX54-204ENST00000546898 MOGSQ13724 837 aa19.18■□□□□ 0.66
DDX54-204ENST00000546898 PKN2Q16513 984 aaKnown RBP19.18■□□□□ 0.66
DDX54-204ENST00000546898 ANKRD45Q5TZF3 282 aa19.18■□□□□ 0.66
DDX54-204ENST00000546898 TSHZ3Q63HK5 1081 aa19.18■□□□□ 0.66
DDX54-204ENST00000546898 FASTKD5Q7L8L6 764 aaKnown RBP19.18■□□□□ 0.66
DDX54-204ENST00000546898 ERO1AQ96HE7 468 aa19.18■□□□□ 0.66
DDX54-204ENST00000546898 RWDD1Q9H446 243 aaPredicted RBP19.18■□□□□ 0.66
DDX54-204ENST00000546898 SERPINB13Q9UIV8 391 aa19.18■□□□□ 0.66
DDX54-204ENST00000546898 SALL3Q9BXA9 1300 aa19.18■□□□□ 0.66
DDX54-204ENST00000546898 MBD4O95243 580 aa19.17■□□□□ 0.66
DDX54-204ENST00000546898 ASNSP08243 561 aa19.17■□□□□ 0.66
DDX54-204ENST00000546898 LRRFIP1Q32MZ4 808 aaKnown RBP19.17■□□□□ 0.66
DDX54-204ENST00000546898 PI4K2BQ8TCG2 481 aa19.17■□□□□ 0.66
DDX54-204ENST00000546898 ARMT1Q9H993 441 aa19.17■□□□□ 0.66
DDX54-204ENST00000546898 AS3MTQ9HBK9 375 aa19.17■□□□□ 0.66
DDX54-204ENST00000546898 USP17L5A8MUK1 530 aa19.16■□□□□ 0.66
DDX54-204ENST00000546898 TLR2O60603 784 aa19.16■□□□□ 0.66
DDX54-204ENST00000546898 ZFYP08048 801 aaPredicted RBP19.16■□□□□ 0.66
DDX54-204ENST00000546898 SP3Q02447 781 aa19.16■□□□□ 0.66
DDX54-204ENST00000546898 RRP1BQ14684 758 aaKnown RBP19.16■□□□□ 0.66
DDX54-204ENST00000546898 SMC5Q8IY18 1101 aa19.16■□□□□ 0.66
DDX54-204ENST00000546898 ZNF280CQ8ND82 737 aa19.16■□□□□ 0.66
DDX54-204ENST00000546898 OTUD7AQ8TE49 926 aaPredicted RBP19.16■□□□□ 0.66
DDX54-204ENST00000546898 SDR42E1Q8WUS8 393 aa19.16■□□□□ 0.66
DDX54-204ENST00000546898 DCP1AQ9NPI6 582 aaPredicted RBP19.16■□□□□ 0.66
DDX54-204ENST00000546898 ATP8A2Q9NTI2 1148 aa19.16■□□□□ 0.66
DDX54-204ENST00000546898 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.16■□□□□ 0.66
DDX54-204ENST00000546898 TAOK2Q9UL54 1235 aa19.16■□□□□ 0.66
DDX54-204ENST00000546898 TRIM75PA6NK02 468 aa19.15■□□□□ 0.66
DDX54-204ENST00000546898 PDHXO00330 501 aa19.15■□□□□ 0.66
DDX54-204ENST00000546898 POLR3DP05423 398 aaPredicted RBP19.15■□□□□ 0.66
DDX54-204ENST00000546898 SLC4A8Q2Y0W8 1093 aa19.15■□□□□ 0.66
DDX54-204ENST00000546898 TATDN1Q6P1N9 297 aa19.15■□□□□ 0.66
DDX54-204ENST00000546898 MCM9Q9NXL9 1143 aa19.15■□□□□ 0.66
DDX54-204ENST00000546898 SLC45A1Q9Y2W3 748 aa19.15■□□□□ 0.66
DDX54-204ENST00000546898 SLFNL1Q499Z3 407 aa19.14■□□□□ 0.65
DDX54-204ENST00000546898 GPAT2Q6NUI2 795 aa19.14■□□□□ 0.65
DDX54-204ENST00000546898 GADL1Q6ZQY3 521 aa19.14■□□□□ 0.65
DDX54-204ENST00000546898 CCDC84Q86UT8 332 aaPredicted RBP19.14■□□□□ 0.65
DDX54-204ENST00000546898 PROCA1Q8NCQ7 364 aaPredicted RBP19.14■□□□□ 0.65
DDX54-204ENST00000546898 APPBP2Q92624 585 aa19.14■□□□□ 0.65
DDX54-204ENST00000546898 PARK7Q99497 189 aaKnown RBP19.14■□□□□ 0.65
DDX54-204ENST00000546898 ZBTB21Q9ULJ3 1066 aa19.14■□□□□ 0.65
DDX54-204ENST00000546898 RNF113AO15541 343 aaKnown RBP19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 308.9 ms