RNA–Protein interactions for RNA: ENST00000546146.5

LDHC-210, Transcript of lactate dehydrogenase C, humanhuman

TSL 5 BASIC

Gene LDHC, Length 701 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHC-210ENST00000546146 EVCP57679 992 aa12.14□□□□□ -0.47
LDHC-210ENST00000546146 HMGN5P82970 282 aaKnown RBP12.14□□□□□ -0.47
LDHC-210ENST00000546146 TMEM67Q5HYA8 995 aa12.14□□□□□ -0.47
LDHC-210ENST00000546146 STRIP1Q5VSL9 837 aa12.14□□□□□ -0.47
LDHC-210ENST00000546146 LARP1BQ659C4 914 aaKnown RBP12.14□□□□□ -0.47
LDHC-210ENST00000546146 CTR9Q6PD62 1173 aa12.14□□□□□ -0.47
LDHC-210ENST00000546146 OLFM4Q6UX06 510 aa12.14□□□□□ -0.47
LDHC-210ENST00000546146 SLC51AQ86UW1 340 aa12.14□□□□□ -0.47
LDHC-210ENST00000546146 ZNF384Q8TF68 577 aa12.14□□□□□ -0.47
LDHC-210ENST00000546146 C7orf43Q8WVR3 580 aa12.14□□□□□ -0.47
LDHC-210ENST00000546146 DCP1AQ9NPI6 582 aaPredicted RBP12.14□□□□□ -0.47
LDHC-210ENST00000546146 MCM9Q9NXL9 1143 aa12.14□□□□□ -0.47
LDHC-210ENST00000546146 MAST2Q6P0Q8 1798 aa12.13□□□□□ -0.47
LDHC-210ENST00000546146 CACNA1SQ13698 1873 aa12.13□□□□□ -0.47
LDHC-210ENST00000546146 KLF18A0A0U1RQI7 1052 aa12.13□□□□□ -0.47
LDHC-210ENST00000546146 USP17L3A6NCW0 530 aa12.13□□□□□ -0.47
LDHC-210ENST00000546146 USP17L4A6NCW7 530 aa12.13□□□□□ -0.47
LDHC-210ENST00000546146 CPLX1O14810 134 aa12.13□□□□□ -0.47
LDHC-210ENST00000546146 PPIP5K2O43314 1243 aa12.13□□□□□ -0.47
LDHC-210ENST00000546146 STX6O43752 255 aa12.13□□□□□ -0.47
LDHC-210ENST00000546146 ECE2O60344 883 aa12.13□□□□□ -0.47
LDHC-210ENST00000546146 POLR3DP05423 398 aaPredicted RBP12.13□□□□□ -0.47
LDHC-210ENST00000546146 PDIA3P30101 505 aaKnown RBP12.13□□□□□ -0.47
LDHC-210ENST00000546146 KIAA2012Q0VF49 1180 aa12.13□□□□□ -0.47
LDHC-210ENST00000546146 DIXDC1Q155Q3 683 aa12.13□□□□□ -0.47
LDHC-210ENST00000546146 CLEC17AQ6ZS10 378 aa12.13□□□□□ -0.47
LDHC-210ENST00000546146 USP17L1Q7RTZ2 530 aa12.13□□□□□ -0.47
LDHC-210ENST00000546146 IQCA1Q86XH1 822 aa12.13□□□□□ -0.47
LDHC-210ENST00000546146 TEX11Q8IYF3 940 aa12.13□□□□□ -0.47
LDHC-210ENST00000546146 SH3RF3Q8TEJ3 882 aaPredicted RBP12.13□□□□□ -0.47
LDHC-210ENST00000546146 NBPF3Q9H094 633 aa12.13□□□□□ -0.47
LDHC-210ENST00000546146 DBNDD1Q9H9R9 158 aa12.13□□□□□ -0.47
LDHC-210ENST00000546146 ZSWIM5Q9P217 1185 aa12.13□□□□□ -0.47
LDHC-210ENST00000546146 TTF2Q9UNY4 1162 aaKnown RBP12.13□□□□□ -0.47
LDHC-210ENST00000546146 COL11A2P13942 1736 aaPredicted RBP12.13□□□□□ -0.47
LDHC-210ENST00000546146 GOLGA8BA8MQT2 603 aa12.12□□□□□ -0.47
LDHC-210ENST00000546146 CDKL5O76039 1030 aa12.12□□□□□ -0.47
LDHC-210ENST00000546146 BRD1O95696 1058 aa12.12□□□□□ -0.47
LDHC-210ENST00000546146 LIFRP42702 1097 aa12.12□□□□□ -0.47
LDHC-210ENST00000546146 WTAPQ15007 396 aa12.12□□□□□ -0.47
LDHC-210ENST00000546146 R3HDM1Q15032 1099 aaKnown RBP12.12□□□□□ -0.47
LDHC-210ENST00000546146 SKOR2Q2VWA4 1001 aaPredicted RBP12.12□□□□□ -0.47
LDHC-210ENST00000546146 CCDC178Q5BJE1 867 aa12.12□□□□□ -0.47
LDHC-210ENST00000546146 CYB5R4Q7L1T6 521 aa12.12□□□□□ -0.47
LDHC-210ENST00000546146 STK11IPQ8N1F8 1099 aa12.12□□□□□ -0.47
LDHC-210ENST00000546146 TGFBRAP1Q8WUH2 860 aa12.12□□□□□ -0.47
LDHC-210ENST00000546146 TEKT1Q969V4 418 aa12.12□□□□□ -0.47
LDHC-210ENST00000546146 PSMD1Q99460 953 aa12.12□□□□□ -0.47
LDHC-210ENST00000546146 MRIQ9BWK5 157 aa12.12□□□□□ -0.47
LDHC-210ENST00000546146 SLC12A7Q9Y666 1083 aa12.12□□□□□ -0.47
LDHC-210ENST00000546146 LTBP1Q14766 1721 aa12.11□□□□□ -0.47
LDHC-210ENST00000546146 CCDC196A0A1B0GTZ2 297 aa12.11□□□□□ -0.47
LDHC-210ENST00000546146 F8W031 263 aaPredicted RBP12.11□□□□□ -0.47
LDHC-210ENST00000546146 H3BQV1 296 aa12.11□□□□□ -0.47
LDHC-210ENST00000546146 SH2B2O14492 632 aaPredicted RBP12.11□□□□□ -0.47
LDHC-210ENST00000546146 ZBTB43O43298 467 aa12.11□□□□□ -0.47
LDHC-210ENST00000546146 ORC4O43929 436 aa12.11□□□□□ -0.47
LDHC-210ENST00000546146 RANBP6O60518 1105 aaKnown RBP12.11□□□□□ -0.47
LDHC-210ENST00000546146 BAG4O95429 457 aaKnown RBP12.11□□□□□ -0.47
LDHC-210ENST00000546146 ZSCAN22P10073 491 aaPredicted RBP12.11□□□□□ -0.47
LDHC-210ENST00000546146 SYT1P21579 422 aa12.11□□□□□ -0.47
LDHC-210ENST00000546146 ANTXR2P58335 489 aa12.11□□□□□ -0.47
LDHC-210ENST00000546146 CCT2P78371 535 aaKnown RBP12.11□□□□□ -0.47
LDHC-210ENST00000546146 HDLBPQ00341 1268 aaKnown RBP12.11□□□□□ -0.47
LDHC-210ENST00000546146 SCRN1Q12765 414 aa12.11□□□□□ -0.47
LDHC-210ENST00000546146 GRIK5Q16478 980 aa12.11□□□□□ -0.47
LDHC-210ENST00000546146 AOC3Q16853 763 aa12.11□□□□□ -0.47
LDHC-210ENST00000546146 DALRD3Q5D0E6 543 aaKnown RBP12.11□□□□□ -0.47
LDHC-210ENST00000546146 IFFO2Q5TF58 517 aa12.11□□□□□ -0.47
LDHC-210ENST00000546146 HHIPL2Q6UWX4 724 aa12.11□□□□□ -0.47
LDHC-210ENST00000546146 UPF1Q92900 1129 aaKnown RBP eCLIP12.11□□□□□ -0.47
LDHC-210ENST00000546146 MKNK2Q9HBH9 465 aa12.11□□□□□ -0.47
LDHC-210ENST00000546146 PPP1R1BQ9UD71 204 aaPredicted RBP12.11□□□□□ -0.47
LDHC-210ENST00000546146 CD2APQ9Y5K6 639 aa12.11□□□□□ -0.47
LDHC-210ENST00000546146 GAKO14976 1311 aa12.11□□□□□ -0.47
LDHC-210ENST00000546146 NEDD4P46934 1319 aa12.11□□□□□ -0.47
LDHC-210ENST00000546146 VPS37CA5D8V6 355 aaPredicted RBP12.1□□□□□ -0.47
LDHC-210ENST00000546146 NCLP19338 710 aaKnown RBP12.1□□□□□ -0.47
LDHC-210ENST00000546146 METAP2P50579 478 aaKnown RBP eCLIP12.1□□□□□ -0.47
LDHC-210ENST00000546146 COL9A3Q14050 684 aaPredicted RBP12.1□□□□□ -0.47
LDHC-210ENST00000546146 PPP2R5BQ15173 497 aa12.1□□□□□ -0.47
LDHC-210ENST00000546146 CSPP1Q1MSJ5 1256 aa12.1□□□□□ -0.47
LDHC-210ENST00000546146 C12orf60Q5U649 245 aa12.1□□□□□ -0.47
LDHC-210ENST00000546146 FOXD4L5Q5VV16 416 aaPredicted RBP12.1□□□□□ -0.47
LDHC-210ENST00000546146 TTC6Q86TZ1 520 aa12.1□□□□□ -0.47
LDHC-210ENST00000546146 ZNF444Q8N0Y2 327 aaPredicted RBP12.1□□□□□ -0.47
LDHC-210ENST00000546146 LARGE2Q8N3Y3 721 aa12.1□□□□□ -0.47
LDHC-210ENST00000546146 IGDCC4Q8TDY8 1250 aa12.1□□□□□ -0.47
LDHC-210ENST00000546146 FOXD4L4Q8WXT5 416 aaPredicted RBP12.1□□□□□ -0.47
LDHC-210ENST00000546146 USP40Q9NVE5 1235 aa12.1□□□□□ -0.47
LDHC-210ENST00000546146 LAMA4Q16363 1823 aa12.09□□□□□ -0.47
LDHC-210ENST00000546146 SLX4Q8IY92 1834 aa12.09□□□□□ -0.47
LDHC-210ENST00000546146 TSPY2A6NKD2 308 aa12.09□□□□□ -0.47
LDHC-210ENST00000546146 RIOK3O14730 519 aaKnown RBP12.09□□□□□ -0.47
LDHC-210ENST00000546146 FGRP09769 529 aa12.09□□□□□ -0.47
LDHC-210ENST00000546146 USP17L8P0C7I0 530 aa12.09□□□□□ -0.47
LDHC-210ENST00000546146 CALM1P0DP23 149 aa12.09□□□□□ -0.47
LDHC-210ENST00000546146 CALM2P0DP24 149 aa12.09□□□□□ -0.47
LDHC-210ENST00000546146 CALM3P0DP25 149 aa12.09□□□□□ -0.47
LDHC-210ENST00000546146 KCNA3P22001 575 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms