RNA–Protein interactions for RNA: ENST00000545913.5

CIT-217, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 5

Gene CIT, Length 8,520 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-217ENST00000545913 B4E1Z4 1266 aa13.06□□□□□ -0.32
CIT-217ENST00000545913 SH3BP5O60239 455 aa13.06□□□□□ -0.32
CIT-217ENST00000545913 CRCPO75575 148 aa13.06□□□□□ -0.32
CIT-217ENST00000545913 ATP11AP98196 1134 aa13.06□□□□□ -0.32
CIT-217ENST00000545913 SP4Q02446 784 aa13.06□□□□□ -0.32
CIT-217ENST00000545913 DNAJC21Q5F1R6 531 aaKnown RBP13.06□□□□□ -0.32
CIT-217ENST00000545913 C8orf74Q6P047 294 aa13.06□□□□□ -0.32
CIT-217ENST00000545913 TNNI3KQ59H18 835 aa13.06□□□□□ -0.32
CIT-217ENST00000545913 GPCPD1Q9NPB8 672 aa13.06□□□□□ -0.32
CIT-217ENST00000545913 FPGT-TNNI3KV9GXZ4 949 aa13.06□□□□□ -0.32
CIT-217ENST00000545913 PAK1Q13153 545 aa13.06□□□□□ -0.32
CIT-217ENST00000545913 AFAP1L2Q8N4X5 818 aa13.06□□□□□ -0.32
CIT-217ENST00000545913 ATP7AQ04656 1500 aa13.05□□□□□ -0.32
CIT-217ENST00000545913 CIB2O75838 187 aa13.05□□□□□ -0.32
CIT-217ENST00000545913 TNFAIP3P21580 790 aa13.05□□□□□ -0.32
CIT-217ENST00000545913 SLC9C1Q4G0N8 1177 aa13.05□□□□□ -0.32
CIT-217ENST00000545913 CROCCP2Q86T23 111 aa13.05□□□□□ -0.32
CIT-217ENST00000545913 SAP30BPQ9UHR5 308 aaKnown RBP13.05□□□□□ -0.32
CIT-217ENST00000545913 HOXC9P31274 260 aa13.05□□□□□ -0.32
CIT-217ENST00000545913 FAM204AQ9H8W3 233 aa13.05□□□□□ -0.32
CIT-217ENST00000545913 TAOK1Q7L7X3 1001 aa13.05□□□□□ -0.32
CIT-217ENST00000545913 CCDC169A6NNP5 214 aa13.05□□□□□ -0.32
CIT-217ENST00000545913 NBPF14Q5TI25 921 aa13.05□□□□□ -0.32
CIT-217ENST00000545913 VPS52Q8N1B4 723 aa13.05□□□□□ -0.32
CIT-217ENST00000545913 CSGALNACT2Q8N6G5 542 aa13.05□□□□□ -0.32
CIT-217ENST00000545913 EYA2O00167 538 aa13.05□□□□□ -0.32
CIT-217ENST00000545913 NOP56O00567 594 aaKnown RBP13.05□□□□□ -0.32
CIT-217ENST00000545913 PDE8AO60658 829 aa13.05□□□□□ -0.32
CIT-217ENST00000545913 BCRP11274 1271 aa13.05□□□□□ -0.32
CIT-217ENST00000545913 EVCP57679 992 aa13.05□□□□□ -0.32
CIT-217ENST00000545913 TRIM6Q9C030 488 aaPredicted RBP13.05□□□□□ -0.32
CIT-217ENST00000545913 ARHGEF35A5YM69 484 aa13.05□□□□□ -0.32
CIT-217ENST00000545913 CETN3O15182 167 aa13.05□□□□□ -0.32
CIT-217ENST00000545913 GPAA1O43292 621 aa13.05□□□□□ -0.32
CIT-217ENST00000545913 CALCRLQ16602 461 aa13.05□□□□□ -0.32
CIT-217ENST00000545913 MLKLQ8NB16 471 aa13.05□□□□□ -0.32
CIT-217ENST00000545913 EYA1Q99502 592 aa13.05□□□□□ -0.32
CIT-217ENST00000545913 HIBADHP31937 336 aaKnown RBP13.04□□□□□ -0.32
CIT-217ENST00000545913 RBM26Q5T8P6 1007 aaKnown RBP13.04□□□□□ -0.32
CIT-217ENST00000545913 SH3TC1Q8TE82 1336 aa13.04□□□□□ -0.32
CIT-217ENST00000545913 RLBP1P12271 317 aa13.04□□□□□ -0.32
CIT-217ENST00000545913 UAP1Q16222 522 aaPredicted RBP13.04□□□□□ -0.32
CIT-217ENST00000545913 SYCE1Q8N0S2 351 aa13.04□□□□□ -0.32
CIT-217ENST00000545913 TSPYL6Q8N831 410 aa13.04□□□□□ -0.32
CIT-217ENST00000545913 ERO1AQ96HE7 468 aa13.04□□□□□ -0.32
CIT-217ENST00000545913 KRT9P35527 623 aa13.04□□□□□ -0.32
CIT-217ENST00000545913 ITIH3Q06033 890 aa13.04□□□□□ -0.32
CIT-217ENST00000545913 JAG2Q9Y219 1238 aa13.04□□□□□ -0.32
CIT-217ENST00000545913 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.04□□□□□ -0.321e-5■□□□□ 10.5
CIT-217ENST00000545913 GRM1Q13255 1194 aa13.04□□□□□ -0.32
CIT-217ENST00000545913 OGFRQ9NZT2 677 aa13.04□□□□□ -0.32
CIT-217ENST00000545913 UFL1O94874 794 aa13.04□□□□□ -0.32
CIT-217ENST00000545913 AFAP1L1Q8TED9 768 aa13.04□□□□□ -0.32
CIT-217ENST00000545913 MROH5Q6ZUA9 1318 aa13.04□□□□□ -0.32
CIT-217ENST00000545913 GIPC1O14908 333 aa13.04□□□□□ -0.32
CIT-217ENST00000545913 PIK3AP1Q6ZUJ8 805 aa13.04□□□□□ -0.32
CIT-217ENST00000545913 RSRC1Q96IZ7 334 aaKnown RBP13.04□□□□□ -0.32
CIT-217ENST00000545913 GGA1Q9UJY5 639 aa13.04□□□□□ -0.32
CIT-217ENST00000545913 IQCDQ96DY2 449 aa13.03□□□□□ -0.32
CIT-217ENST00000545913 HAUS7Q99871 368 aa13.03□□□□□ -0.32
CIT-217ENST00000545913 CABLES1Q8TDN4 633 aa13.03□□□□□ -0.32
CIT-217ENST00000545913 FAM89AQ96GI7 184 aa13.03□□□□□ -0.32
CIT-217ENST00000545913 VPS16Q9H269 839 aa13.03□□□□□ -0.32
CIT-217ENST00000545913 SHROOM2Q13796 1616 aa13.03□□□□□ -0.32
CIT-217ENST00000545913 ZNF202O95125 648 aa13.03□□□□□ -0.32
CIT-217ENST00000545913 VIMP08670 466 aaKnown RBP13.03□□□□□ -0.32
CIT-217ENST00000545913 DAPK3O43293 454 aa13.03□□□□□ -0.32
CIT-217ENST00000545913 ZNF365Q70YC5 407 aa13.03□□□□□ -0.32
CIT-217ENST00000545913 PODXL2Q9NZ53 605 aa13.03□□□□□ -0.32
CIT-217ENST00000545913 TSKSQ9UJT2 592 aa13.03□□□□□ -0.32
CIT-217ENST00000545913 FLOT1O75955 427 aa13.03□□□□□ -0.32
CIT-217ENST00000545913 PHACTR3Q96KR7 559 aa13.03□□□□□ -0.32
CIT-217ENST00000545913 NUCKS1Q9H1E3 243 aaKnown RBP13.03□□□□□ -0.32
CIT-217ENST00000545913 RASA3Q14644 834 aa13.03□□□□□ -0.32
CIT-217ENST00000545913 TTC38Q5R3I4 469 aa13.03□□□□□ -0.32
CIT-217ENST00000545913 CHMP2AO43633 222 aa13.03□□□□□ -0.32
CIT-217ENST00000545913 XAGE2Q96GT9 111 aa13.03□□□□□ -0.32
CIT-217ENST00000545913 DNM3Q9UQ16 869 aa13.03□□□□□ -0.32
CIT-217ENST00000545913 POSTNQ15063 836 aa13.02□□□□□ -0.32
CIT-217ENST00000545913 PLCB1Q9NQ66 1216 aa13.02□□□□□ -0.32
CIT-217ENST00000545913 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.02□□□□□ -0.33
CIT-217ENST00000545913 SRGAP1Q7Z6B7 1085 aa13.02□□□□□ -0.33
CIT-217ENST00000545913 PPANQ9NQ55 473 aaKnown RBP13.02□□□□□ -0.33
CIT-217ENST00000545913 TRAPPC8Q9Y2L5 1435 aa13.02□□□□□ -0.33
CIT-217ENST00000545913 HARSP12081 509 aaKnown RBP13.02□□□□□ -0.33
CIT-217ENST00000545913 UTP14CQ5TAP6 766 aaKnown RBP13.02□□□□□ -0.33
CIT-217ENST00000545913 CCDC125Q86Z20 511 aa13.02□□□□□ -0.33
CIT-217ENST00000545913 RNF34Q969K3 372 aa13.02□□□□□ -0.33
CIT-217ENST00000545913 KCNG1Q9UIX4 513 aa13.02□□□□□ -0.33
CIT-217ENST00000545913 ZBTB7BO15156 539 aaPredicted RBP13.02□□□□□ -0.33
CIT-217ENST00000545913 RUFY4Q6ZNE9 571 aa13.02□□□□□ -0.33
CIT-217ENST00000545913 KRT25Q7Z3Z0 450 aa13.02□□□□□ -0.33
CIT-217ENST00000545913 CCDC84Q86UT8 332 aaPredicted RBP13.02□□□□□ -0.33
CIT-217ENST00000545913 TMTC1Q8IUR5 882 aa13.02□□□□□ -0.33
CIT-217ENST00000545913 HPDP32754 393 aaPredicted RBP13.02□□□□□ -0.33
CIT-217ENST00000545913 PPFIBP2Q8ND30 876 aa13.02□□□□□ -0.33
CIT-217ENST00000545913 GPHNQ9NQX3 736 aaPredicted RBP13.02□□□□□ -0.33
CIT-217ENST00000545913 SLC1A4P43007 532 aa13.01□□□□□ -0.33
CIT-217ENST00000545913 MRPL44Q9H9J2 332 aaKnown RBP13.01□□□□□ -0.33
CIT-217ENST00000545913 MAP3K19Q56UN5 1328 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms