RNA–Protein interactions for RNA: ENST00000545707.5

LDLR-204, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-204ENST00000545707 MDM2Q00987 491 aaPredicted RBP18.17■□□□□ 0.5
LDLR-204ENST00000545707 USP49Q70CQ1 688 aa18.17■□□□□ 0.5
LDLR-204ENST00000545707 SERTAD1Q9UHV2 236 aa18.17■□□□□ 0.5
LDLR-204ENST00000545707 SLC4A4Q9Y6R1 1079 aa18.17■□□□□ 0.5
LDLR-204ENST00000545707 MMP1P03956 469 aa18.16■□□□□ 0.5
LDLR-204ENST00000545707 TOP1P11387 765 aaKnown RBP18.16■□□□□ 0.5
LDLR-204ENST00000545707 FMR1Q06787 632 aaKnown RBP eCLIP18.16■□□□□ 0.56e-7■□□□□ 9.2
LDLR-204ENST00000545707 ALX1Q15699 326 aa18.16■□□□□ 0.5
LDLR-204ENST00000545707 VSTM4Q8IW00 320 aa18.16■□□□□ 0.5
LDLR-204ENST00000545707 TMX1Q9H3N1 280 aa18.16■□□□□ 0.5
LDLR-204ENST00000545707 L2HGDHQ9H9P8 463 aa18.16■□□□□ 0.5
LDLR-204ENST00000545707 MORC2Q9Y6X9 1032 aaPredicted RBP18.16■□□□□ 0.5
LDLR-204ENST00000545707 NRDCO43847 1150 aa18.15■□□□□ 0.5
LDLR-204ENST00000545707 IFNAR1P17181 557 aa18.15■□□□□ 0.5
LDLR-204ENST00000545707 MPHOSPH8Q99549 860 aa18.15■□□□□ 0.5
LDLR-204ENST00000545707 hCG_1642624A0A1W2PR95 340 aa18.15■□□□□ 0.5
LDLR-204ENST00000545707 SLC5A1P13866 664 aa18.15■□□□□ 0.5
LDLR-204ENST00000545707 RTN1Q16799 776 aa18.15■□□□□ 0.5
LDLR-204ENST00000545707 CCDC93Q567U6 631 aa18.15■□□□□ 0.5
LDLR-204ENST00000545707 SUSD4Q5VX71 490 aa18.15■□□□□ 0.5
LDLR-204ENST00000545707 ZNF446Q9NWS9 450 aa18.15■□□□□ 0.5
LDLR-204ENST00000545707 MAN1B1Q9UKM7 699 aa18.15■□□□□ 0.5
LDLR-204ENST00000545707 ETF1P62495 437 aaKnown RBP18.14■□□□□ 0.5
LDLR-204ENST00000545707 WTAPQ15007 396 aa18.14■□□□□ 0.5
LDLR-204ENST00000545707 FBXO2Q9UK22 296 aaPredicted RBP18.14■□□□□ 0.5
LDLR-204ENST00000545707 FAM205CA6NFA0 338 aa18.14■□□□□ 0.49
LDLR-204ENST00000545707 WTIPA6NIX2 430 aaPredicted RBP18.14■□□□□ 0.49
LDLR-204ENST00000545707 CBFA2T2O43439 604 aa18.14■□□□□ 0.49
LDLR-204ENST00000545707 SAFBQ15424 915 aaKnown RBP eCLIP18.14■□□□□ 0.49
LDLR-204ENST00000545707 TRIM65Q6PJ69 517 aa18.14■□□□□ 0.49
LDLR-204ENST00000545707 ST7Q9NRC1 585 aa18.14■□□□□ 0.49
LDLR-204ENST00000545707 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.14■□□□□ 0.499e-8■■□□□ 11.7
LDLR-204ENST00000545707 MROH5Q6ZUA9 1318 aa18.14■□□□□ 0.49
LDLR-204ENST00000545707 POSTNQ15063 836 aa18.13■□□□□ 0.49
LDLR-204ENST00000545707 REXO1L1PQ8IX06 675 aa18.13■□□□□ 0.49
LDLR-204ENST00000545707 SDR42E1Q8WUS8 393 aa18.13■□□□□ 0.49
LDLR-204ENST00000545707 CABP5Q9NP86 173 aa18.13■□□□□ 0.49
LDLR-204ENST00000545707 MINDY4BA8MYZ0 360 aa18.13■□□□□ 0.49
LDLR-204ENST00000545707 ADKP55263 362 aaKnown RBP18.13■□□□□ 0.49
LDLR-204ENST00000545707 TRIM22Q8IYM9 498 aa18.13■□□□□ 0.49
LDLR-204ENST00000545707 ZNF34Q8IZ26 560 aa18.13■□□□□ 0.49
LDLR-204ENST00000545707 MED15Q96RN5 788 aa18.13■□□□□ 0.49
LDLR-204ENST00000545707 KRT23Q9C075 422 aa18.13■□□□□ 0.49
LDLR-204ENST00000545707 NFE2L3Q9Y4A8 694 aa18.13■□□□□ 0.49
LDLR-204ENST00000545707 CDK11BP21127 795 aaKnown RBP18.12■□□□□ 0.49
LDLR-204ENST00000545707 PTPREP23469 700 aa18.12■□□□□ 0.49
LDLR-204ENST00000545707 KCNJ6P48051 423 aa18.12■□□□□ 0.49
LDLR-204ENST00000545707 ADGRA1Q86SQ6 560 aa18.12■□□□□ 0.49
LDLR-204ENST00000545707 CRACR2BQ8N4Y2 399 aaPredicted RBP18.12■□□□□ 0.49
LDLR-204ENST00000545707 CNNM2Q9H8M5 875 aa18.12■□□□□ 0.49
LDLR-204ENST00000545707 LRP2BPQ9P2M1 347 aa18.12■□□□□ 0.49
LDLR-204ENST00000545707 STK36Q9NRP7 1315 aa18.12■□□□□ 0.49
LDLR-204ENST00000545707 URI1O94763 535 aaPredicted RBP18.12■□□□□ 0.49
LDLR-204ENST00000545707 CASP1P29466 404 aa18.12■□□□□ 0.49
LDLR-204ENST00000545707 TMEM139Q8IV31 216 aa18.12■□□□□ 0.49
LDLR-204ENST00000545707 SHISA4Q96DD7 197 aa18.12■□□□□ 0.49
LDLR-204ENST00000545707 SAMSN1Q9NSI8 373 aaKnown RBP18.12■□□□□ 0.49
LDLR-204ENST00000545707 ARHGAP29Q52LW3 1261 aa18.11■□□□□ 0.49
LDLR-204ENST00000545707 RGS22Q8NE09 1264 aa18.11■□□□□ 0.49
LDLR-204ENST00000545707 PRDM1O75626 825 aa18.11■□□□□ 0.49
LDLR-204ENST00000545707 ZNF654Q8IZM8 581 aa18.11■□□□□ 0.49
LDLR-204ENST00000545707 FANCBQ8NB91 859 aa18.11■□□□□ 0.49
LDLR-204ENST00000545707 STAG1Q8WVM7 1258 aa18.11■□□□□ 0.49
LDLR-204ENST00000545707 WASF1Q92558 559 aa18.11■□□□□ 0.49
LDLR-204ENST00000545707 CSRNP2Q9H175 543 aa18.11■□□□□ 0.49
LDLR-204ENST00000545707 EPC1Q9H2F5 836 aa18.11■□□□□ 0.49
LDLR-204ENST00000545707 ABCF2Q9UG63 623 aa18.11■□□□□ 0.49
LDLR-204ENST00000545707 SLIT2O94813 1529 aa18.11■□□□□ 0.49
LDLR-204ENST00000545707 ERICH2A1L162 156 aa18.1■□□□□ 0.49
LDLR-204ENST00000545707 SART3Q15020 963 aaKnown RBP18.1■□□□□ 0.49
LDLR-204ENST00000545707 EARS2Q5JPH6 523 aaKnown RBP18.1■□□□□ 0.49
LDLR-204ENST00000545707 ZNF771Q7L3S4 317 aaPredicted RBP18.1■□□□□ 0.49
LDLR-204ENST00000545707 KRT222Q8N1A0 295 aa18.1■□□□□ 0.49
LDLR-204ENST00000545707 NACAP1Q9BZK3 213 aa18.1■□□□□ 0.49
LDLR-204ENST00000545707 BCL9O00512 1426 aa18.1■□□□□ 0.49
LDLR-204ENST00000545707 CYP2D7A0A087X1C5 515 aa18.1■□□□□ 0.49
LDLR-204ENST00000545707 VWA3AA6NCI4 1184 aa18.1■□□□□ 0.49
LDLR-204ENST00000545707 SMARCE1Q969G3 411 aa18.1■□□□□ 0.49
LDLR-204ENST00000545707 VPS54Q9P1Q0 977 aa18.1■□□□□ 0.49
LDLR-204ENST00000545707 PPP2R2CQ9Y2T4 447 aa18.1■□□□□ 0.49
LDLR-204ENST00000545707 ERVV-1B6SEH8 477 aa18.09■□□□□ 0.49
LDLR-204ENST00000545707 DEXIO95424 95 aa18.09■□□□□ 0.49
LDLR-204ENST00000545707 RILPL1Q5EBL4 403 aa18.09■□□□□ 0.49
LDLR-204ENST00000545707 TOGARAM2Q6ZUX3 1019 aa18.09■□□□□ 0.49
LDLR-204ENST00000545707 EPSTI1Q96J88 318 aa18.09■□□□□ 0.49
LDLR-204ENST00000545707 FOXP1Q9H334 677 aaPredicted RBP18.09■□□□□ 0.49
LDLR-204ENST00000545707 ECM29Q5VYK3 1845 aa18.09■□□□□ 0.49
LDLR-204ENST00000545707 A0A087X0B3 334 aa18.09■□□□□ 0.49
LDLR-204ENST00000545707 H2AFXP16104 143 aaPredicted RBP18.09■□□□□ 0.49
LDLR-204ENST00000545707 CYP7A1P22680 504 aa18.09■□□□□ 0.49
LDLR-204ENST00000545707 IL6STP40189 918 aaPredicted RBP18.09■□□□□ 0.49
LDLR-204ENST00000545707 AFMP43652 599 aa18.09■□□□□ 0.49
LDLR-204ENST00000545707 CLCN6P51797 869 aa18.09■□□□□ 0.49
LDLR-204ENST00000545707 PPARAQ07869 468 aa18.09■□□□□ 0.49
LDLR-204ENST00000545707 BAG1Q99933 345 aaPredicted RBP18.09■□□□□ 0.49
LDLR-204ENST00000545707 UBAC1Q9BSL1 405 aa18.09■□□□□ 0.49
LDLR-204ENST00000545707 DESI2Q9BSY9 194 aa18.09■□□□□ 0.49
LDLR-204ENST00000545707 CARD6Q9BX69 1037 aa18.09■□□□□ 0.49
LDLR-204ENST00000545707 ZNF335Q9H4Z2 1342 aaPredicted RBP18.08■□□□□ 0.49
LDLR-204ENST00000545707 WNT7AO00755 349 aa18.08■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms