RNA–Protein interactions for RNA: ENST00000545432.5

RTN3-214, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-214ENST00000545432 Q7L0L9 218 aa18.35■□□□□ 0.53
RTN3-214ENST00000545432 CCDC84Q86UT8 332 aaPredicted RBP18.35■□□□□ 0.53
RTN3-214ENST00000545432 ZSCAN29Q8IWY8 852 aaPredicted RBP18.35■□□□□ 0.53
RTN3-214ENST00000545432 ZNF280CQ8ND82 737 aa18.35■□□□□ 0.53
RTN3-214ENST00000545432 ZNF384Q8TF68 577 aa18.35■□□□□ 0.53
RTN3-214ENST00000545432 COL2A1P02458 1487 aaPredicted RBP18.34■□□□□ 0.53
RTN3-214ENST00000545432 PFASO15067 1338 aa18.34■□□□□ 0.53
RTN3-214ENST00000545432 IL15P40933 162 aaPredicted RBP18.34■□□□□ 0.53
RTN3-214ENST00000545432 BTDP43251 543 aa18.34■□□□□ 0.53
RTN3-214ENST00000545432 SPP2Q13103 211 aa18.34■□□□□ 0.53
RTN3-214ENST00000545432 PABPC4Q13310 644 aaKnown RBP eCLIP18.34■□□□□ 0.53
RTN3-214ENST00000545432 RASGRF1Q13972 1273 aa18.34■□□□□ 0.53
RTN3-214ENST00000545432 FAM109BQ6ICB4 259 aaPredicted RBP18.34■□□□□ 0.53
RTN3-214ENST00000545432 TRIB2Q92519 343 aa18.34■□□□□ 0.53
RTN3-214ENST00000545432 ASCC2Q9H1I8 757 aaPredicted RBP18.34■□□□□ 0.53
RTN3-214ENST00000545432 DOCK1Q14185 1865 aa18.34■□□□□ 0.53
RTN3-214ENST00000545432 MYH13Q9UKX3 1938 aa18.33■□□□□ 0.53
RTN3-214ENST00000545432 MROH7-TTC4A0A0A0MT08 1334 aa18.33■□□□□ 0.53
RTN3-214ENST00000545432 POTEB2H3BUK9 544 aa18.33■□□□□ 0.52
RTN3-214ENST00000545432 HOXA7P31268 230 aaPredicted RBP18.33■□□□□ 0.52
RTN3-214ENST00000545432 CAP2P40123 477 aa18.33■□□□□ 0.52
RTN3-214ENST00000545432 RRP1BQ14684 758 aaKnown RBP18.33■□□□□ 0.52
RTN3-214ENST00000545432 SSH1Q8WYL5 1049 aa18.33■□□□□ 0.52
RTN3-214ENST00000545432 USP6NLQ92738 828 aa18.33■□□□□ 0.52
RTN3-214ENST00000545432 COPRSQ9NQ92 184 aa18.33■□□□□ 0.52
RTN3-214ENST00000545432 TAOK2Q9UL54 1235 aa18.33■□□□□ 0.52
RTN3-214ENST00000545432 SYN1P17600 705 aa18.32■□□□□ 0.52
RTN3-214ENST00000545432 SPTY2D1Q68D10 685 aaPredicted RBP18.32■□□□□ 0.52
RTN3-214ENST00000545432 WDR18Q9BV38 432 aa18.32■□□□□ 0.52
RTN3-214ENST00000545432 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.32■□□□□ 0.52
RTN3-214ENST00000545432 MYH2Q9UKX2 1941 aa18.31■□□□□ 0.52
RTN3-214ENST00000545432 USP17L5A8MUK1 530 aa18.31■□□□□ 0.52
RTN3-214ENST00000545432 ADORA1P30542 326 aa18.31■□□□□ 0.52
RTN3-214ENST00000545432 PICALMQ13492 652 aa18.31■□□□□ 0.52
RTN3-214ENST00000545432 LHX8Q68G74 356 aa18.31■□□□□ 0.52
RTN3-214ENST00000545432 COL25A1Q9BXS0 654 aaPredicted RBP18.31■□□□□ 0.52
RTN3-214ENST00000545432 PLXNB2O15031 1838 aa18.3■□□□□ 0.52
RTN3-214ENST00000545432 LOC285556D6RIA3 1793 aa18.3■□□□□ 0.52
RTN3-214ENST00000545432 HMGCS2P54868 508 aa18.3■□□□□ 0.52
RTN3-214ENST00000545432 MECOMQ03112 1051 aa18.3■□□□□ 0.52
RTN3-214ENST00000545432 DZIP1Q86YF9 867 aaKnown RBP18.3■□□□□ 0.52
RTN3-214ENST00000545432 TRMT44Q8IYL2 757 aaKnown RBP18.3■□□□□ 0.52
RTN3-214ENST00000545432 UBE2OQ9C0C9 1292 aaKnown RBP18.3■□□□□ 0.52
RTN3-214ENST00000545432 SIL1Q9H173 461 aa18.3■□□□□ 0.52
RTN3-214ENST00000545432 ABCF2Q9UG63 623 aa18.3■□□□□ 0.52
RTN3-214ENST00000545432 P2RX7Q99572 595 aaKnown RBP18.29■□□□□ 0.52
RTN3-214ENST00000545432 HERC5Q9UII4 1024 aaKnown RBP18.29■□□□□ 0.52
RTN3-214ENST00000545432 FAM196BA6NMK8 535 aa18.28■□□□□ 0.52
RTN3-214ENST00000545432 BACE1P56817 501 aa18.28■□□□□ 0.52
RTN3-214ENST00000545432 TIMM10P62072 90 aa18.28■□□□□ 0.52
RTN3-214ENST00000545432 METTL16Q86W50 562 aaKnown RBP18.28■□□□□ 0.52
RTN3-214ENST00000545432 SOCS4Q8WXH5 440 aa18.28■□□□□ 0.52
RTN3-214ENST00000545432 NSUN4Q96CB9 384 aaKnown RBP18.28■□□□□ 0.52
RTN3-214ENST00000545432 NUDT12Q9BQG2 462 aa18.28■□□□□ 0.52
RTN3-214ENST00000545432 TXNRD2Q9NNW7 524 aa18.28■□□□□ 0.52
RTN3-214ENST00000545432 RBPJLQ9UBG7 517 aa18.28■□□□□ 0.52
RTN3-214ENST00000545432 DDX60LQ5H9U9 1706 aaKnown RBP18.27■□□□□ 0.52
RTN3-214ENST00000545432 UBTFL1P0CB47 393 aaPredicted RBP18.27■□□□□ 0.52
RTN3-214ENST00000545432 PRKAR2AP13861 404 aaKnown RBP18.27■□□□□ 0.52
RTN3-214ENST00000545432 CACNB2Q08289 660 aaPredicted RBP18.27■□□□□ 0.52
RTN3-214ENST00000545432 ALDH1L2Q3SY69 923 aa18.27■□□□□ 0.52
RTN3-214ENST00000545432 ERICH6Q7L0X2 663 aa18.27■□□□□ 0.52
RTN3-214ENST00000545432 AS3MTQ9HBK9 375 aa18.27■□□□□ 0.52
RTN3-214ENST00000545432 PA2G4Q9UQ80 394 aaKnown RBP18.27■□□□□ 0.52
RTN3-214ENST00000545432 C19orf81C9J6K1 198 aa18.26■□□□□ 0.51
RTN3-214ENST00000545432 LDHCP07864 332 aa18.26■□□□□ 0.51
RTN3-214ENST00000545432 CYP2B6P20813 491 aa18.26■□□□□ 0.51
RTN3-214ENST00000545432 LRRC26Q2I0M4 334 aa18.26■□□□□ 0.51
RTN3-214ENST00000545432 Q3C1V9 767 aa18.26■□□□□ 0.51
RTN3-214ENST00000545432 MORN1Q5T089 497 aa18.26■□□□□ 0.51
RTN3-214ENST00000545432 POTEEQ6S8J3 1075 aa18.26■□□□□ 0.51
RTN3-214ENST00000545432 GPRC5AQ8NFJ5 357 aa18.26■□□□□ 0.51
RTN3-214ENST00000545432 XAGE2Q96GT9 111 aa18.26■□□□□ 0.51
RTN3-214ENST00000545432 GUCD1Q96NT3 240 aa18.26■□□□□ 0.51
RTN3-214ENST00000545432 GINM1Q9NU53 330 aa18.26■□□□□ 0.51
RTN3-214ENST00000545432 UNC80Q8N2C7 3258 aa18.25■□□□□ 0.51
RTN3-214ENST00000545432 MAPK4P31152 587 aa18.25■□□□□ 0.51
RTN3-214ENST00000545432 HERVK_113P62684 666 aa18.25■□□□□ 0.51
RTN3-214ENST00000545432 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.25■□□□□ 0.51
RTN3-214ENST00000545432 HMG20BQ9P0W2 317 aa18.25■□□□□ 0.51
RTN3-214ENST00000545432 PI4KBQ9UBF8 816 aa18.25■□□□□ 0.51
RTN3-214ENST00000545432 HDAC5Q9UQL6 1122 aa18.25■□□□□ 0.51
RTN3-214ENST00000545432 A0A1B0GUL7 405 aa18.24■□□□□ 0.51
RTN3-214ENST00000545432 GSTO1P78417 241 aa18.24■□□□□ 0.51
RTN3-214ENST00000545432 JAG1P78504 1218 aa18.24■□□□□ 0.51
RTN3-214ENST00000545432 MVPQ14764 893 aaKnown RBP18.24■□□□□ 0.51
RTN3-214ENST00000545432 DHX36Q9H2U1 1008 aaKnown RBP18.24■□□□□ 0.51
RTN3-214ENST00000545432 AKAP2Q9Y2D5 859 aa18.24■□□□□ 0.51
RTN3-214ENST00000545432 E9PSI1 815 aa18.23■□□□□ 0.51
RTN3-214ENST00000545432 IGHA2P01877 340 aa18.23■□□□□ 0.51
RTN3-214ENST00000545432 ASNSP08243 561 aa18.23■□□□□ 0.51
RTN3-214ENST00000545432 IRX3P78415 501 aaPredicted RBP18.23■□□□□ 0.51
RTN3-214ENST00000545432 GTF3C2Q8WUA4 911 aaPredicted RBP18.23■□□□□ 0.51
RTN3-214ENST00000545432 CCND3P30281 292 aaPredicted RBP18.22■□□□□ 0.51
RTN3-214ENST00000545432 PPP4CP60510 307 aa18.22■□□□□ 0.51
RTN3-214ENST00000545432 ERVK-9P63128 1117 aa18.22■□□□□ 0.51
RTN3-214ENST00000545432 ERVK-24P63145 666 aa18.22■□□□□ 0.51
RTN3-214ENST00000545432 MTX1Q13505 466 aa18.22■□□□□ 0.51
RTN3-214ENST00000545432 MTMR2Q13614 643 aa18.22■□□□□ 0.51
RTN3-214ENST00000545432 GPR142Q7Z601 462 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms