RNA–Protein interactions for RNA: ENST00000545425.2

FOXA1-202, Transcript of forkhead box A1, humanhuman

TSL 2

Gene FOXA1, Length 1,806 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-202ENST00000545425 B4E1Z4 1266 aa26.81■■□□□ 1.88
FOXA1-202ENST00000545425 CCP110O43303 1012 aa26.81■■□□□ 1.88
FOXA1-202ENST00000545425 EIF5P55010 431 aaKnown RBP26.81■■□□□ 1.88
FOXA1-202ENST00000545425 MPHOSPH8Q99549 860 aa26.81■■□□□ 1.88
FOXA1-202ENST00000545425 WWC3Q9ULE0 1092 aa26.81■■□□□ 1.88
FOXA1-202ENST00000545425 ZNF831Q5JPB2 1677 aa26.81■■□□□ 1.88
FOXA1-202ENST00000545425 UBN2Q6ZU65 1347 aa26.81■■□□□ 1.88
FOXA1-202ENST00000545425 CCZ1BP86790 482 aa26.81■■□□□ 1.88
FOXA1-202ENST00000545425 CCZ1P86791 482 aaPredicted RBP26.81■■□□□ 1.88
FOXA1-202ENST00000545425 CCDC152Q4G0S7 254 aa26.81■■□□□ 1.88
FOXA1-202ENST00000545425 RESP18Q5W5W9 173 aa26.81■■□□□ 1.88
FOXA1-202ENST00000545425 NYAP1Q6ZVC0 841 aa26.81■■□□□ 1.88
FOXA1-202ENST00000545425 TRIM22Q8IYM9 498 aa26.81■■□□□ 1.88
FOXA1-202ENST00000545425 SYNE4Q8N205 404 aa26.81■■□□□ 1.88
FOXA1-202ENST00000545425 UTP14AQ9BVJ6 771 aaKnown RBP26.81■■□□□ 1.88
FOXA1-202ENST00000545425 CNTNAP4Q9C0A0 1308 aa26.8■■□□□ 1.88
FOXA1-202ENST00000545425 DPCR1Q3MIW9 517 aa26.8■■□□□ 1.88
FOXA1-202ENST00000545425 CEP135Q66GS9 1140 aa26.8■■□□□ 1.88
FOXA1-202ENST00000545425 C16orf45Q96MC5 204 aaPredicted RBP26.8■■□□□ 1.88
FOXA1-202ENST00000545425 MAP3K14Q99558 947 aa26.8■■□□□ 1.88
FOXA1-202ENST00000545425 RTCBQ9Y3I0 505 aaKnown RBP26.8■■□□□ 1.88
FOXA1-202ENST00000545425 ECM29Q5VYK3 1845 aa26.8■■□□□ 1.88
FOXA1-202ENST00000545425 PTPN14Q15678 1187 aa26.79■■□□□ 1.88
FOXA1-202ENST00000545425 TMED8Q6PL24 325 aaPredicted RBP26.79■■□□□ 1.88
FOXA1-202ENST00000545425 MFSD6Q6ZSS7 791 aa26.79■■□□□ 1.88
FOXA1-202ENST00000545425 AMIGO3Q86WK7 504 aa26.79■■□□□ 1.88
FOXA1-202ENST00000545425 GNL3Q9BVP2 549 aaKnown RBP eCLIP26.79■■□□□ 1.88
FOXA1-202ENST00000545425 FHDC1Q9C0D6 1143 aaPredicted RBP26.79■■□□□ 1.88
FOXA1-202ENST00000545425 IFIT3O14879 490 aaKnown RBP26.79■■□□□ 1.88
FOXA1-202ENST00000545425 CDC5LQ99459 802 aaKnown RBP26.79■■□□□ 1.88
FOXA1-202ENST00000545425 BCORQ6W2J9 1755 aa26.78■■□□□ 1.88
FOXA1-202ENST00000545425 DCAF8L1A6NGE4 600 aa26.78■■□□□ 1.88
FOXA1-202ENST00000545425 CDC27P30260 824 aa26.78■■□□□ 1.88
FOXA1-202ENST00000545425 IGHMBP2P38935 993 aaKnown RBP26.78■■□□□ 1.88
FOXA1-202ENST00000545425 PDCL2Q8N4E4 241 aa26.78■■□□□ 1.88
FOXA1-202ENST00000545425 SYT17Q9BSW7 474 aa26.78■■□□□ 1.88
FOXA1-202ENST00000545425 FOXP1Q9H334 677 aaPredicted RBP26.78■■□□□ 1.88
FOXA1-202ENST00000545425 ERICH2A1L162 156 aa26.77■■□□□ 1.88
FOXA1-202ENST00000545425 MBD4O95243 580 aa26.77■■□□□ 1.88
FOXA1-202ENST00000545425 ADRA2BP18089 450 aa26.77■■□□□ 1.88
FOXA1-202ENST00000545425 TRAPPC3LQ5T215 181 aa26.77■■□□□ 1.88
FOXA1-202ENST00000545425 MICU3Q86XE3 530 aa26.77■■□□□ 1.88
FOXA1-202ENST00000545425 MAGEB6Q8N7X4 407 aa26.77■■□□□ 1.88
FOXA1-202ENST00000545425 CCDC87Q9NVE4 849 aa26.77■■□□□ 1.88
FOXA1-202ENST00000545425 MYO5AQ9Y4I1 1855 aaKnown RBP26.77■■□□□ 1.88
FOXA1-202ENST00000545425 RGL2O15211 777 aa26.76■■□□□ 1.88
FOXA1-202ENST00000545425 WDHD1O75717 1129 aaPredicted RBP26.76■■□□□ 1.88
FOXA1-202ENST00000545425 RASGRF1Q13972 1273 aa26.76■■□□□ 1.88
FOXA1-202ENST00000545425 RILPL1Q5EBL4 403 aa26.76■■□□□ 1.88
FOXA1-202ENST00000545425 SMAP1Q8IYB5 467 aaPredicted RBP26.76■■□□□ 1.88
FOXA1-202ENST00000545425 CCAR2Q8N163 923 aaKnown RBP26.76■■□□□ 1.88
FOXA1-202ENST00000545425 FAM217BQ9NTX9 383 aaPredicted RBP26.76■■□□□ 1.88
FOXA1-202ENST00000545425 CEP131Q9UPN4 1083 aa26.76■■□□□ 1.88
FOXA1-202ENST00000545425 RPS6KA4O75676 772 aa26.76■■□□□ 1.87
FOXA1-202ENST00000545425 PCP11498 1178 aaKnown RBP26.76■■□□□ 1.87
FOXA1-202ENST00000545425 NCAPHQ15003 741 aa26.76■■□□□ 1.87
FOXA1-202ENST00000545425 FILIP1Q7Z7B0 1213 aa26.76■■□□□ 1.87
FOXA1-202ENST00000545425 KRI1Q8N9T8 703 aaKnown RBP26.76■■□□□ 1.87
FOXA1-202ENST00000545425 ZNF579Q8NAF0 562 aaKnown RBP26.76■■□□□ 1.87
FOXA1-202ENST00000545425 EPB41L4AQ9HCS5 686 aaPredicted RBP26.76■■□□□ 1.87
FOXA1-202ENST00000545425 ZSWIM5Q9P217 1185 aa26.76■■□□□ 1.87
FOXA1-202ENST00000545425 GSG1L2A8MUP6 293 aa26.75■■□□□ 1.87
FOXA1-202ENST00000545425 PPFIA3O75145 1194 aa26.75■■□□□ 1.87
FOXA1-202ENST00000545425 OLFM4Q6UX06 510 aa26.75■■□□□ 1.87
FOXA1-202ENST00000545425 NBPF11Q86T75 865 aa26.75■■□□□ 1.87
FOXA1-202ENST00000545425 NOSTRINQ8IVI9 506 aa26.75■■□□□ 1.87
FOXA1-202ENST00000545425 FEZ1Q99689 392 aa26.75■■□□□ 1.87
FOXA1-202ENST00000545425 DEXIO95424 95 aa26.74■■□□□ 1.87
FOXA1-202ENST00000545425 MYL5Q02045 173 aa26.74■■□□□ 1.87
FOXA1-202ENST00000545425 MSL1Q68DK7 614 aa26.74■■□□□ 1.87
FOXA1-202ENST00000545425 SMIM5Q71RC9 77 aa26.74■■□□□ 1.87
FOXA1-202ENST00000545425 DACH1Q9UI36 760 aa26.74■■□□□ 1.87
FOXA1-202ENST00000545425 ANAPC4Q9UJX5 808 aa26.74■■□□□ 1.87
FOXA1-202ENST00000545425 MROH7-TTC4A0A0A0MT08 1334 aa26.74■■□□□ 1.87
FOXA1-202ENST00000545425 MMP1P03956 469 aa26.74■■□□□ 1.87
FOXA1-202ENST00000545425 SFPQP23246 707 aaKnown RBP eCLIP26.74■■□□□ 1.87
FOXA1-202ENST00000545425 CRKLP46109 303 aaKnown RBP26.74■■□□□ 1.87
FOXA1-202ENST00000545425 WTAPQ15007 396 aa26.74■■□□□ 1.87
FOXA1-202ENST00000545425 RTN1Q16799 776 aa26.74■■□□□ 1.87
FOXA1-202ENST00000545425 CT47A1Q5JQC4 288 aaPredicted RBP26.74■■□□□ 1.87
FOXA1-202ENST00000545425 KANK3Q6NY19 840 aa26.74■■□□□ 1.87
FOXA1-202ENST00000545425 SHC4Q6S5L8 630 aa26.74■■□□□ 1.87
FOXA1-202ENST00000545425 CCDC34Q96HJ3 373 aa26.74■■□□□ 1.87
FOXA1-202ENST00000545425 RANBP6O60518 1105 aaKnown RBP26.73■■□□□ 1.87
FOXA1-202ENST00000545425 SMC2O95347 1197 aa26.73■■□□□ 1.87
FOXA1-202ENST00000545425 KIF18AQ8NI77 898 aa26.73■■□□□ 1.87
FOXA1-202ENST00000545425 XPO4Q9C0E2 1151 aaKnown RBP26.73■■□□□ 1.87
FOXA1-202ENST00000545425 CGNQ9P2M7 1197 aaKnown RBP26.73■■□□□ 1.87
FOXA1-202ENST00000545425 TDO2P48775 406 aa26.72■■□□□ 1.87
FOXA1-202ENST00000545425 SUSD4Q5VX71 490 aa26.72■■□□□ 1.87
FOXA1-202ENST00000545425 UBR3Q6ZT12 1888 aa26.72■■□□□ 1.87
FOXA1-202ENST00000545425 TRIML1Q8N9V2 468 aa26.72■■□□□ 1.87
FOXA1-202ENST00000545425 SLC26A6Q9BXS9 759 aa26.72■■□□□ 1.87
FOXA1-202ENST00000545425 GNL3LQ9NVN8 582 aaKnown RBP26.72■■□□□ 1.87
FOXA1-202ENST00000545425 IFNKQ9P0W0 207 aa26.72■■□□□ 1.87
FOXA1-202ENST00000545425 COL24A1Q17RW2 1714 aa26.72■■□□□ 1.87
FOXA1-202ENST00000545425 KRBA2Q6ZNG9 492 aa26.72■■□□□ 1.87
FOXA1-202ENST00000545425 RAB11FIP4Q86YS3 637 aa26.72■■□□□ 1.87
FOXA1-202ENST00000545425 PHKBQ93100 1093 aa26.72■■□□□ 1.87
FOXA1-202ENST00000545425 KCNH3Q9ULD8 1083 aa26.72■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms