RNA–Protein interactions for RNA: ENST00000544964.6

ACTN1-206, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 891 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-206ENST00000544964 TMEM106CQ9BVX2 250 aa15.24■□□□□ 0.03
ACTN1-206ENST00000544964 IL1RAPL2Q9NP60 686 aa15.24■□□□□ 0.03
ACTN1-206ENST00000544964 AFG3L2Q9Y4W6 797 aa15.24■□□□□ 0.03
ACTN1-206ENST00000544964 SMARCA5O60264 1052 aaPredicted RBP15.23■□□□□ 0.03
ACTN1-206ENST00000544964 RAB11FIP3O75154 756 aa15.23■□□□□ 0.03
ACTN1-206ENST00000544964 NPM3O75607 178 aaKnown RBP15.23■□□□□ 0.03
ACTN1-206ENST00000544964 OSBPP22059 807 aa15.23■□□□□ 0.03
ACTN1-206ENST00000544964 PSMC4P43686 418 aa15.23■□□□□ 0.03
ACTN1-206ENST00000544964 PRMT2P55345 433 aa15.23■□□□□ 0.03
ACTN1-206ENST00000544964 TBC1D9Q6ZT07 1266 aa15.23■□□□□ 0.03
ACTN1-206ENST00000544964 NBPF11Q86T75 865 aa15.23■□□□□ 0.03
ACTN1-206ENST00000544964 ZSCAN29Q8IWY8 852 aaPredicted RBP15.23■□□□□ 0.03
ACTN1-206ENST00000544964 NEUROD6Q96NK8 337 aa15.23■□□□□ 0.03
ACTN1-206ENST00000544964 PICK1Q9NRD5 415 aa15.23■□□□□ 0.03
ACTN1-206ENST00000544964 SRRDQ9UH36 339 aa15.23■□□□□ 0.03
ACTN1-206ENST00000544964 ZHX2Q9Y6X8 837 aa15.23■□□□□ 0.03
ACTN1-206ENST00000544964 FAM196BA6NMK8 535 aa15.22■□□□□ 0.03
ACTN1-206ENST00000544964 MYCP01106 439 aaPredicted RBP15.22■□□□□ 0.03
ACTN1-206ENST00000544964 TNNI3KQ59H18 835 aa15.22■□□□□ 0.03
ACTN1-206ENST00000544964 CCDC84Q86UT8 332 aaPredicted RBP15.22■□□□□ 0.03
ACTN1-206ENST00000544964 SHISA4Q96DD7 197 aa15.22■□□□□ 0.03
ACTN1-206ENST00000544964 KIF1BPQ96EK5 621 aa15.22■□□□□ 0.03
ACTN1-206ENST00000544964 FPGT-TNNI3KV9GXZ4 949 aa15.22■□□□□ 0.03
ACTN1-206ENST00000544964 MYPNQ86TC9 1320 aa15.21■□□□□ 0.03
ACTN1-206ENST00000544964 CTNND1O60716 968 aaKnown RBP15.21■□□□□ 0.03
ACTN1-206ENST00000544964 SLC4A8Q2Y0W8 1093 aa15.21■□□□□ 0.03
ACTN1-206ENST00000544964 EAF2Q96CJ1 260 aaPredicted RBP15.21■□□□□ 0.03
ACTN1-206ENST00000544964 LRRCC1Q9C099 1032 aa15.21■□□□□ 0.03
ACTN1-206ENST00000544964 GPR108Q9NPR9 543 aa15.21■□□□□ 0.03
ACTN1-206ENST00000544964 TRIM75PA6NK02 468 aa15.2■□□□□ 0.02
ACTN1-206ENST00000544964 TBC1D12O60347 775 aa15.2■□□□□ 0.02
ACTN1-206ENST00000544964 PRKCZQ05513 592 aa15.2■□□□□ 0.02
ACTN1-206ENST00000544964 MTFR1Q15390 333 aa15.2■□□□□ 0.02
ACTN1-206ENST00000544964 B4GALNT3Q6L9W6 998 aa15.2■□□□□ 0.02
ACTN1-206ENST00000544964 AACSQ86V21 672 aa15.2■□□□□ 0.02
ACTN1-206ENST00000544964 GCC1Q96CN9 775 aa15.2■□□□□ 0.02
ACTN1-206ENST00000544964 CCDC8Q9H0W5 538 aaPredicted RBP15.2■□□□□ 0.02
ACTN1-206ENST00000544964 OSBPL5Q9H0X9 879 aaPredicted RBP15.2■□□□□ 0.02
ACTN1-206ENST00000544964 TLR7Q9NYK1 1049 aaKnown RBP15.2■□□□□ 0.02
ACTN1-206ENST00000544964 SLC45A1Q9Y2W3 748 aa15.2■□□□□ 0.02
ACTN1-206ENST00000544964 FMNL1O95466 1100 aaPredicted RBP15.19■□□□□ 0.02
ACTN1-206ENST00000544964 UQCRFS1P1P0C7P4 283 aa15.19■□□□□ 0.02
ACTN1-206ENST00000544964 GSTO1P78417 241 aa15.19■□□□□ 0.02
ACTN1-206ENST00000544964 RRP1BQ14684 758 aaKnown RBP15.19■□□□□ 0.02
ACTN1-206ENST00000544964 GORABQ5T7V8 394 aa15.19■□□□□ 0.02
ACTN1-206ENST00000544964 ANKRD45Q5TZF3 282 aa15.19■□□□□ 0.02
ACTN1-206ENST00000544964 GADL1Q6ZQY3 521 aa15.19■□□□□ 0.02
ACTN1-206ENST00000544964 FASTKD5Q7L8L6 764 aaKnown RBP15.19■□□□□ 0.02
ACTN1-206ENST00000544964 DBNDD2Q9BQY9 259 aa15.19■□□□□ 0.02
ACTN1-206ENST00000544964 RAI14Q9P0K7 980 aa15.19■□□□□ 0.02
ACTN1-206ENST00000544964 MAP4K4O95819 1239 aaPredicted RBP15.18■□□□□ 0.02
ACTN1-206ENST00000544964 GRK4P32298 578 aa15.18■□□□□ 0.02
ACTN1-206ENST00000544964 FCGRTP55899 365 aa15.18■□□□□ 0.02
ACTN1-206ENST00000544964 TREML2Q5T2D2 321 aa15.18■□□□□ 0.02
ACTN1-206ENST00000544964 ADGRA1Q86SQ6 560 aa15.18■□□□□ 0.02
ACTN1-206ENST00000544964 SMC5Q8IY18 1101 aa15.18■□□□□ 0.02
ACTN1-206ENST00000544964 CLASRPQ8N2M8 674 aaKnown RBP15.18■□□□□ 0.02
ACTN1-206ENST00000544964 RAET1EQ8TD07 263 aa15.18■□□□□ 0.02
ACTN1-206ENST00000544964 SH3RF3Q8TEJ3 882 aaPredicted RBP15.18■□□□□ 0.02
ACTN1-206ENST00000544964 GABRQQ9UN88 632 aa15.18■□□□□ 0.02
ACTN1-206ENST00000544964 AGTPBP1Q9UPW5 1226 aa15.18■□□□□ 0.02
ACTN1-206ENST00000544964 DDX60LQ5H9U9 1706 aaKnown RBP15.17■□□□□ 0.02
ACTN1-206ENST00000544964 LDHCP07864 332 aa15.17■□□□□ 0.02
ACTN1-206ENST00000544964 HOXD10P28358 340 aa15.17■□□□□ 0.02
ACTN1-206ENST00000544964 HABP4Q5JVS0 413 aaKnown RBP15.17■□□□□ 0.02
ACTN1-206ENST00000544964 ERICH6BQ5W0A0 696 aa15.17■□□□□ 0.02
ACTN1-206ENST00000544964 TEX11Q8IYF3 940 aa15.17■□□□□ 0.02
ACTN1-206ENST00000544964 CCDC136Q96JN2 1154 aa15.17■□□□□ 0.02
ACTN1-206ENST00000544964 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.17■□□□□ 0.02
ACTN1-206ENST00000544964 SNRKQ9NRH2 765 aa15.17■□□□□ 0.02
ACTN1-206ENST00000544964 PCDH10Q9P2E7 1040 aa15.17■□□□□ 0.02
ACTN1-206ENST00000544964 DBNLQ9UJU6 430 aaKnown RBP15.17■□□□□ 0.02
ACTN1-206ENST00000544964 SZT2Q5T011 3432 aa15.17■□□□□ 0.02
ACTN1-206ENST00000544964 PLXNB2O15031 1838 aa15.17■□□□□ 0.02
ACTN1-206ENST00000544964 MYH1P12882 1939 aa15.16■□□□□ 0.02
ACTN1-206ENST00000544964 CYP2E1P05181 493 aaPredicted RBP15.16■□□□□ 0.02
ACTN1-206ENST00000544964 IFIT2P09913 472 aaKnown RBP15.16■□□□□ 0.02
ACTN1-206ENST00000544964 CAP2P40123 477 aa15.16■□□□□ 0.02
ACTN1-206ENST00000544964 UBE2Q1Q7Z7E8 422 aa15.16■□□□□ 0.02
ACTN1-206ENST00000544964 DNAJC18Q9H819 358 aa15.16■□□□□ 0.02
ACTN1-206ENST00000544964 PPP4R2Q9NY27 417 aa15.16■□□□□ 0.02
ACTN1-206ENST00000544964 LRP2BPQ9P2M1 347 aa15.16■□□□□ 0.02
ACTN1-206ENST00000544964 ZBTB47Q9UFB7 747 aaPredicted RBP15.16■□□□□ 0.02
ACTN1-206ENST00000544964 CCL5P13501 91 aa15.15■□□□□ 0.02
ACTN1-206ENST00000544964 TTC39AQ5SRH9 613 aa15.15■□□□□ 0.02
ACTN1-206ENST00000544964 PROCA1Q8NCQ7 364 aaPredicted RBP15.15■□□□□ 0.02
ACTN1-206ENST00000544964 SLAIN1Q8ND83 568 aa15.15■□□□□ 0.02
ACTN1-206ENST00000544964 SMCR8Q8TEV9 937 aaPredicted RBP15.15■□□□□ 0.02
ACTN1-206ENST00000544964 ZNF512BQ96KM6 892 aaPredicted RBP15.15■□□□□ 0.02
ACTN1-206ENST00000544964 AATFQ9NY61 560 aaKnown RBP eCLIP15.15■□□□□ 0.02
ACTN1-206ENST00000544964 FLT1P17948 1338 aa15.15■□□□□ 0.02
ACTN1-206ENST00000544964 ALPK3Q96L96 1907 aa15.14■□□□□ 0.01
ACTN1-206ENST00000544964 GJB1P08034 283 aa15.14■□□□□ 0.01
ACTN1-206ENST00000544964 GJA8P48165 433 aa15.14■□□□□ 0.01
ACTN1-206ENST00000544964 FLT3LGP49771 235 aa15.14■□□□□ 0.01
ACTN1-206ENST00000544964 NUCB1Q02818 461 aa15.14■□□□□ 0.01
ACTN1-206ENST00000544964 SPP2Q13103 211 aa15.14■□□□□ 0.01
ACTN1-206ENST00000544964 NAA16Q6N069 864 aaPredicted RBP15.14■□□□□ 0.01
ACTN1-206ENST00000544964 OTUD7AQ8TE49 926 aaPredicted RBP15.14■□□□□ 0.01
ACTN1-206ENST00000544964 LNPKQ9C0E8 428 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms