RNA–Protein interactions for RNA: ENST00000544910.5

VPS50-220, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2 BASIC

Gene VPS50, Length 5,736 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-220ENST00000544910 WDR19Q8NEZ3 1342 aa6.56□□□□□ -1.36
VPS50-220ENST00000544910 CDHR2Q9BYE9 1310 aa6.56□□□□□ -1.36
VPS50-220ENST00000544910 HIBADHP31937 336 aaKnown RBP6.56□□□□□ -1.36
VPS50-220ENST00000544910 TPTE2Q6XPS3 522 aa6.56□□□□□ -1.36
VPS50-220ENST00000544910 FBXO18Q8NFZ0 1043 aa6.56□□□□□ -1.36
VPS50-220ENST00000544910 KCNB2Q92953 911 aa6.56□□□□□ -1.36
VPS50-220ENST00000544910 ZSCAN10Q96SZ4 725 aaPredicted RBP6.56□□□□□ -1.36
VPS50-220ENST00000544910 FTOQ9C0B1 505 aaKnown RBP eCLIP6.56□□□□□ -1.36
VPS50-220ENST00000544910 XPO4Q9C0E2 1151 aaKnown RBP6.56□□□□□ -1.36
VPS50-220ENST00000544910 OGFRQ9NZT2 677 aa6.56□□□□□ -1.36
VPS50-220ENST00000544910 ERVV-1B6SEH8 477 aa6.56□□□□□ -1.36
VPS50-220ENST00000544910 KIF20AO95235 890 aa6.56□□□□□ -1.36
VPS50-220ENST00000544910 LDHBP07195 334 aaKnown RBP6.56□□□□□ -1.36
VPS50-220ENST00000544910 IL6STP40189 918 aaPredicted RBP6.56□□□□□ -1.36
VPS50-220ENST00000544910 GTF2A1P52655 376 aaPredicted RBP6.56□□□□□ -1.36
VPS50-220ENST00000544910 NAPAP54920 295 aa6.56□□□□□ -1.36
VPS50-220ENST00000544910 SAMD1Q6SPF0 538 aaPredicted RBP6.56□□□□□ -1.36
VPS50-220ENST00000544910 ATG9AQ7Z3C6 839 aa6.56□□□□□ -1.36
VPS50-220ENST00000544910 SMARCC2Q8TAQ2 1214 aa6.56□□□□□ -1.36
VPS50-220ENST00000544910 DYDC1Q8WWB3 177 aa6.56□□□□□ -1.36
VPS50-220ENST00000544910 CCDC102AQ96A19 550 aa6.56□□□□□ -1.36
VPS50-220ENST00000544910 NWD1Q149M9 1564 aa6.56□□□□□ -1.36
VPS50-220ENST00000544910 VWA3AA6NCI4 1184 aa6.56□□□□□ -1.36
VPS50-220ENST00000544910 AKR1B15C9JRZ8 316 aaPredicted RBP6.56□□□□□ -1.36
VPS50-220ENST00000544910 KIF23Q02241 960 aaPredicted RBP6.56□□□□□ -1.36
VPS50-220ENST00000544910 TTC38Q5R3I4 469 aa6.56□□□□□ -1.36
VPS50-220ENST00000544910 JAKMIP3Q5VZ66 844 aa6.56□□□□□ -1.36
VPS50-220ENST00000544910 RRP36Q96EU6 259 aaKnown RBP6.56□□□□□ -1.36
VPS50-220ENST00000544910 PIH1D3Q9NQM4 214 aaKnown RBP6.56□□□□□ -1.36
VPS50-220ENST00000544910 WWC3Q9ULE0 1092 aa6.56□□□□□ -1.36
VPS50-220ENST00000544910 AK9Q5TCS8 1911 aa6.56□□□□□ -1.36
VPS50-220ENST00000544910 BCAMP50895 628 aa6.56□□□□□ -1.36
VPS50-220ENST00000544910 CHRNDQ07001 517 aa6.56□□□□□ -1.36
VPS50-220ENST00000544910 USPL1Q5W0Q7 1092 aa6.56□□□□□ -1.36
VPS50-220ENST00000544910 WWC2Q6AWC2 1192 aa6.56□□□□□ -1.36
VPS50-220ENST00000544910 ZSCAN29Q8IWY8 852 aaPredicted RBP6.56□□□□□ -1.36
VPS50-220ENST00000544910 ZNF654Q8IZM8 581 aa6.56□□□□□ -1.36
VPS50-220ENST00000544910 CRACR2BQ8N4Y2 399 aaPredicted RBP6.56□□□□□ -1.36
VPS50-220ENST00000544910 IQUBQ8NA54 791 aa6.56□□□□□ -1.36
VPS50-220ENST00000544910 LINC00301Q8NCQ3 95 aa6.56□□□□□ -1.36
VPS50-220ENST00000544910 EHBP1Q8NDI1 1231 aa6.56□□□□□ -1.36
VPS50-220ENST00000544910 PIGBQ92521 554 aa6.56□□□□□ -1.36
VPS50-220ENST00000544910 FEZ1Q99689 392 aa6.56□□□□□ -1.36
VPS50-220ENST00000544910 VAT1LQ9HCJ6 419 aa6.56□□□□□ -1.36
VPS50-220ENST00000544910 C6orf50Q9HD87 102 aa6.56□□□□□ -1.36
VPS50-220ENST00000544910 RTCBQ9Y3I0 505 aaKnown RBP6.56□□□□□ -1.36
VPS50-220ENST00000544910 V9GY48 417 aaPredicted RBP6.56□□□□□ -1.36
VPS50-220ENST00000544910 LMTK3Q96Q04 1460 aa6.55□□□□□ -1.36
VPS50-220ENST00000544910 IVLP07476 585 aa6.55□□□□□ -1.36
VPS50-220ENST00000544910 ADD1P35611 737 aaKnown RBP6.55□□□□□ -1.36
VPS50-220ENST00000544910 STX17P56962 302 aa6.55□□□□□ -1.36
VPS50-220ENST00000544910 LRMPQ12912 555 aa6.55□□□□□ -1.36
VPS50-220ENST00000544910 SLFNL1Q499Z3 407 aa6.55□□□□□ -1.36
VPS50-220ENST00000544910 PIK3AP1Q6ZUJ8 805 aa6.55□□□□□ -1.36
VPS50-220ENST00000544910 CEP112Q8N8E3 955 aa6.55□□□□□ -1.36
VPS50-220ENST00000544910 PGBD1Q96JS3 809 aa6.55□□□□□ -1.36
VPS50-220ENST00000544910 GOLPH3LQ9H4A5 285 aa6.55□□□□□ -1.36
VPS50-220ENST00000544910 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.55□□□□□ -1.36
VPS50-220ENST00000544910 V9GYY5 206 aaPredicted RBP6.55□□□□□ -1.36
VPS50-220ENST00000544910 MEGF6O75095 1541 aa6.55□□□□□ -1.36
VPS50-220ENST00000544910 USO1O60763 962 aaKnown RBP6.55□□□□□ -1.36
VPS50-220ENST00000544910 ZNF76P36508 570 aa6.55□□□□□ -1.36
VPS50-220ENST00000544910 RFX5P48382 616 aaPredicted RBP6.55□□□□□ -1.36
VPS50-220ENST00000544910 SLC39A14Q15043 492 aa6.55□□□□□ -1.36
VPS50-220ENST00000544910 KRBA2Q6ZNG9 492 aa6.55□□□□□ -1.36
VPS50-220ENST00000544910 FERMT2Q96AC1 680 aa6.55□□□□□ -1.36
VPS50-220ENST00000544910 ISCA1Q9BUE6 129 aa6.55□□□□□ -1.36
VPS50-220ENST00000544910 BCL2L12Q9HB09 334 aa6.55□□□□□ -1.36
VPS50-220ENST00000544910 AATFQ9NY61 560 aaKnown RBP eCLIP6.55□□□□□ -1.36
VPS50-220ENST00000544910 SERTAD1Q9UHV2 236 aa6.55□□□□□ -1.36
VPS50-220ENST00000544910 STX8Q9UNK0 236 aa6.55□□□□□ -1.36
VPS50-220ENST00000544910 KDM6AO15550 1401 aaPredicted RBP6.55□□□□□ -1.36
VPS50-220ENST00000544910 MCAMP43121 646 aa6.55□□□□□ -1.36
VPS50-220ENST00000544910 CRKLP46109 303 aaKnown RBP6.55□□□□□ -1.36
VPS50-220ENST00000544910 PI16Q6UXB8 463 aa6.55□□□□□ -1.36
VPS50-220ENST00000544910 GOLGA1Q92805 767 aa6.55□□□□□ -1.36
VPS50-220ENST00000544910 ARPP21Q9UBL0 812 aaPredicted RBP6.55□□□□□ -1.36
VPS50-220ENST00000544910 NRBP1Q9UHY1 535 aa6.55□□□□□ -1.36
VPS50-220ENST00000544910 ZBTB1Q9Y2K1 713 aa6.55□□□□□ -1.36
VPS50-220ENST00000544910 NBPF26B4DH59 902 aa6.55□□□□□ -1.36
VPS50-220ENST00000544910 PSMA7O14818 248 aa6.55□□□□□ -1.36
VPS50-220ENST00000544910 DDAH1O94760 285 aa6.55□□□□□ -1.36
VPS50-220ENST00000544910 UBXN1Q04323 297 aa6.55□□□□□ -1.36
VPS50-220ENST00000544910 NBPF14Q5TI25 921 aa6.55□□□□□ -1.36
VPS50-220ENST00000544910 NBPF10Q6P3W6 841 aaKnown RBP6.55□□□□□ -1.36
VPS50-220ENST00000544910 APOA5Q6Q788 366 aa6.55□□□□□ -1.36
VPS50-220ENST00000544910 CACNA2D4Q7Z3S7 1137 aa6.55□□□□□ -1.36
VPS50-220ENST00000544910 PLA2G4DQ86XP0 818 aa6.55□□□□□ -1.36
VPS50-220ENST00000544910 NBPF15Q8N660 670 aa6.55□□□□□ -1.36
VPS50-220ENST00000544910 BICDL2A1A5D9 508 aa6.55□□□□□ -1.36
VPS50-220ENST00000544910 CTAGE9A4FU28 777 aa6.55□□□□□ -1.36
VPS50-220ENST00000544910 PLCG2P16885 1265 aa6.55□□□□□ -1.36
VPS50-220ENST00000544910 TRIM14Q14142 442 aa6.55□□□□□ -1.36
VPS50-220ENST00000544910 DTHD1Q6ZMT9 781 aa6.55□□□□□ -1.36
VPS50-220ENST00000544910 CNGA4Q8IV77 575 aa6.55□□□□□ -1.36
VPS50-220ENST00000544910 MB21D2Q8IYB1 491 aaPredicted RBP6.55□□□□□ -1.36
VPS50-220ENST00000544910 PLCD4Q9BRC7 762 aa6.55□□□□□ -1.36
VPS50-220ENST00000544910 CRACR2AQ9BSW2 395 aa6.55□□□□□ -1.36
VPS50-220ENST00000544910 RGPD1P0DJD0 1748 aa6.54□□□□□ -1.36
VPS50-220ENST00000544910 XRN1Q8IZH2 1706 aaKnown RBP6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms