RNA–Protein interactions for RNA: ENST00000544872.1

CIT-216, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 524 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-216ENST00000544872 SEMA6BQ9H3T3 888 aa11.51□□□□□ -0.57
CIT-216ENST00000544872 VEZTQ9HBM0 779 aa11.51□□□□□ -0.57
CIT-216ENST00000544872 SNRKQ9NRH2 765 aa11.51□□□□□ -0.57
CIT-216ENST00000544872 TTC41PQ6P2S7 1318 aa11.51□□□□□ -0.57
CIT-216ENST00000544872 LRRC37AA6NMS7 1700 aa11.51□□□□□ -0.57
CIT-216ENST00000544872 MYH3P11055 1940 aa11.5□□□□□ -0.57
CIT-216ENST00000544872 DUOX1Q9NRD9 1551 aa11.5□□□□□ -0.57
CIT-216ENST00000544872 SPDYE2BA6NHP3 402 aa11.5□□□□□ -0.57
CIT-216ENST00000544872 WNT10BO00744 389 aa11.5□□□□□ -0.57
CIT-216ENST00000544872 SPDYE6P0CI01 402 aa11.5□□□□□ -0.57
CIT-216ENST00000544872 MX1P20591 662 aa11.5□□□□□ -0.57
CIT-216ENST00000544872 MCAMP43121 646 aa11.5□□□□□ -0.57
CIT-216ENST00000544872 LACTBP83111 547 aaPredicted RBP11.5□□□□□ -0.57
CIT-216ENST00000544872 CHD1LQ86WJ1 897 aa11.5□□□□□ -0.57
CIT-216ENST00000544872 SMC5Q8IY18 1101 aa11.5□□□□□ -0.57
CIT-216ENST00000544872 CERS5Q8N5B7 392 aa11.5□□□□□ -0.57
CIT-216ENST00000544872 CLMNQ96JQ2 1002 aa11.5□□□□□ -0.57
CIT-216ENST00000544872 ZDHHC15Q96MV8 337 aa11.5□□□□□ -0.57
CIT-216ENST00000544872 BOLA2Q9H3K6 86 aa11.5□□□□□ -0.57
CIT-216ENST00000544872 FZD1Q9UP38 647 aa11.5□□□□□ -0.57
CIT-216ENST00000544872 PPP2R3BQ9Y5P8 575 aa11.5□□□□□ -0.57
CIT-216ENST00000544872 ZNF646O15015 1829 aaPredicted RBP11.5□□□□□ -0.57
CIT-216ENST00000544872 GOLIM4O00461 696 aa11.49□□□□□ -0.57
CIT-216ENST00000544872 HOXD10P28358 340 aa11.49□□□□□ -0.57
CIT-216ENST00000544872 ZAP70P43403 619 aa11.49□□□□□ -0.57
CIT-216ENST00000544872 NUCB1Q02818 461 aa11.49□□□□□ -0.57
CIT-216ENST00000544872 CENPQQ7L2Z9 268 aaPredicted RBP11.49□□□□□ -0.57
CIT-216ENST00000544872 DDRGK1Q96HY6 314 aa11.49□□□□□ -0.57
CIT-216ENST00000544872 PTPN18Q99952 460 aa11.49□□□□□ -0.57
CIT-216ENST00000544872 UNC93B1Q9H1C4 597 aa11.49□□□□□ -0.57
CIT-216ENST00000544872 USP40Q9NVE5 1235 aa11.49□□□□□ -0.57
CIT-216ENST00000544872 PAG1Q9NWQ8 432 aa11.49□□□□□ -0.57
CIT-216ENST00000544872 TLR7Q9NYK1 1049 aaKnown RBP11.49□□□□□ -0.57
CIT-216ENST00000544872 PRDX5P30044 214 aa11.48□□□□□ -0.57
CIT-216ENST00000544872 MECOMQ03112 1051 aa11.48□□□□□ -0.57
CIT-216ENST00000544872 NBPF9Q3BBW0 867 aa11.48□□□□□ -0.57
CIT-216ENST00000544872 TMEM31Q5JXX7 168 aa11.48□□□□□ -0.57
CIT-216ENST00000544872 TBC1D9Q6ZT07 1266 aa11.48□□□□□ -0.57
CIT-216ENST00000544872 FAM163AQ96GL9 167 aaPredicted RBP11.48□□□□□ -0.57
CIT-216ENST00000544872 HAUS7Q99871 368 aa11.48□□□□□ -0.57
CIT-216ENST00000544872 LNPKQ9C0E8 428 aa11.48□□□□□ -0.57
CIT-216ENST00000544872 TAF1P21675 1872 aa11.48□□□□□ -0.57
CIT-216ENST00000544872 COL4A1P02462 1669 aa11.47□□□□□ -0.57
CIT-216ENST00000544872 CLRN2A0PK11 232 aa11.47□□□□□ -0.57
CIT-216ENST00000544872 PPP1R12BO60237 982 aaPredicted RBP11.47□□□□□ -0.57
CIT-216ENST00000544872 IGHDP01880 384 aa11.47□□□□□ -0.57
CIT-216ENST00000544872 CYP2E1P05181 493 aaPredicted RBP11.47□□□□□ -0.57
CIT-216ENST00000544872 ZFYP08048 801 aaPredicted RBP11.47□□□□□ -0.57
CIT-216ENST00000544872 CYP7A1P22680 504 aa11.47□□□□□ -0.57
CIT-216ENST00000544872 MDM2Q00987 491 aaPredicted RBP11.47□□□□□ -0.57
CIT-216ENST00000544872 SLC9C2Q5TAH2 1124 aa11.47□□□□□ -0.57
CIT-216ENST00000544872 FKBP1CQ5VVH2 108 aa11.47□□□□□ -0.57
CIT-216ENST00000544872 AMOTL1Q8IY63 956 aa11.47□□□□□ -0.57
CIT-216ENST00000544872 ATXN2LQ8WWM7 1075 aaKnown RBP11.47□□□□□ -0.57
CIT-216ENST00000544872 PPM1EQ8WY54 764 aa11.47□□□□□ -0.57
CIT-216ENST00000544872 PRMT6Q96LA8 375 aaPredicted RBP11.47□□□□□ -0.57
CIT-216ENST00000544872 DEFB118Q96PH6 123 aa11.47□□□□□ -0.57
CIT-216ENST00000544872 ASB2Q96Q27 587 aa11.47□□□□□ -0.57
CIT-216ENST00000544872 DEFB129Q9H1M3 183 aa11.47□□□□□ -0.57
CIT-216ENST00000544872 TDRD3Q9H7E2 651 aaKnown RBP11.47□□□□□ -0.57
CIT-216ENST00000544872 ZNF70Q9UC06 446 aaPredicted RBP11.47□□□□□ -0.57
CIT-216ENST00000544872 SRRDQ9UH36 339 aa11.47□□□□□ -0.57
CIT-216ENST00000544872 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.47□□□□□ -0.57
CIT-216ENST00000544872 TRIM6-TRIM34B2RNG4 842 aa11.46□□□□□ -0.57
CIT-216ENST00000544872 FMNL1O95466 1100 aaPredicted RBP11.46□□□□□ -0.57
CIT-216ENST00000544872 PI16Q6UXB8 463 aa11.46□□□□□ -0.57
CIT-216ENST00000544872 TICAM2Q86XR7 235 aa11.46□□□□□ -0.57
CIT-216ENST00000544872 ZSCAN29Q8IWY8 852 aaPredicted RBP11.46□□□□□ -0.57
CIT-216ENST00000544872 MAGEB6Q8N7X4 407 aa11.46□□□□□ -0.57
CIT-216ENST00000544872 USP38Q8NB14 1042 aa11.46□□□□□ -0.57
CIT-216ENST00000544872 DIS3LQ8TF46 1054 aaKnown RBP11.46□□□□□ -0.57
CIT-216ENST00000544872 NSUN4Q96CB9 384 aaKnown RBP11.46□□□□□ -0.57
CIT-216ENST00000544872 TRIM34Q9BYJ4 488 aa11.46□□□□□ -0.57
CIT-216ENST00000544872 MROH7-TTC4A0A0A0MT08 1334 aa11.45□□□□□ -0.58
CIT-216ENST00000544872 MYPNQ86TC9 1320 aa11.45□□□□□ -0.58
CIT-216ENST00000544872 TCP10L2B9ZVM9 353 aa11.45□□□□□ -0.58
CIT-216ENST00000544872 BTDP43251 543 aa11.45□□□□□ -0.58
CIT-216ENST00000544872 DIXDC1Q155Q3 683 aa11.45□□□□□ -0.58
CIT-216ENST00000544872 SPDYE2Q495Y8 402 aa11.45□□□□□ -0.58
CIT-216ENST00000544872 DCAF15Q66K64 600 aa11.45□□□□□ -0.58
CIT-216ENST00000544872 FAM83AQ86UY5 434 aa11.45□□□□□ -0.58
CIT-216ENST00000544872 EVI5LQ96CN4 794 aa11.45□□□□□ -0.58
CIT-216ENST00000544872 FSD1Q9BTV5 496 aa11.45□□□□□ -0.58
CIT-216ENST00000544872 PPP4R2Q9NY27 417 aa11.45□□□□□ -0.58
CIT-216ENST00000544872 DAGLAQ9Y4D2 1042 aa11.45□□□□□ -0.58
CIT-216ENST00000544872 AOX1Q06278 1338 aa11.44□□□□□ -0.58
CIT-216ENST00000544872 GPR75-ASB3A0A0A6YYF3 556 aa11.44□□□□□ -0.58
CIT-216ENST00000544872 MAGEB6P1A0A0J9YX57 407 aa11.44□□□□□ -0.58
CIT-216ENST00000544872 HIP1O00291 1037 aa11.44□□□□□ -0.58
CIT-216ENST00000544872 CAPN2P17655 700 aa11.44□□□□□ -0.58
CIT-216ENST00000544872 PSMC4P43686 418 aa11.44□□□□□ -0.58
CIT-216ENST00000544872 USP5P45974 858 aa11.44□□□□□ -0.58
CIT-216ENST00000544872 PDE1AP54750 535 aa11.44□□□□□ -0.58
CIT-216ENST00000544872 MRPS5P82675 430 aaKnown RBP11.44□□□□□ -0.58
CIT-216ENST00000544872 FOXK2Q01167 660 aa11.44□□□□□ -0.58
CIT-216ENST00000544872 RASA3Q14644 834 aa11.44□□□□□ -0.58
CIT-216ENST00000544872 APOBEC3HQ6NTF7 200 aaKnown RBP11.44□□□□□ -0.58
CIT-216ENST00000544872 TEX11Q8IYF3 940 aa11.44□□□□□ -0.58
CIT-216ENST00000544872 PIH1D3Q9NQM4 214 aaKnown RBP11.44□□□□□ -0.58
CIT-216ENST00000544872 THEGQ9P2T0 379 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms