RNA–Protein interactions for RNA: ENST00000544777.1

KDM5A-211, Transcript of lysine demethylase 5A, humanhuman

TSL 2

Gene KDM5A, Length 670 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM5A-211ENST00000544777 PDE3AQ14432 1141 aa12.79□□□□□ -0.36
KDM5A-211ENST00000544777 IDI2Q9BXS1 227 aa12.79□□□□□ -0.36
KDM5A-211ENST00000544777 ASCC2Q9H1I8 757 aaPredicted RBP12.79□□□□□ -0.36
KDM5A-211ENST00000544777 MORF4L1Q9UBU8 362 aa12.79□□□□□ -0.36
KDM5A-211ENST00000544777 RLFQ13129 1914 aa12.79□□□□□ -0.36
KDM5A-211ENST00000544777 KIF16BQ96L93 1317 aa12.79□□□□□ -0.36
KDM5A-211ENST00000544777 LAMA2P24043 3122 aaKnown RBP12.78□□□□□ -0.36
KDM5A-211ENST00000544777 PRDX5P30044 214 aa12.78□□□□□ -0.36
KDM5A-211ENST00000544777 HMGCS2P54868 508 aa12.78□□□□□ -0.36
KDM5A-211ENST00000544777 SPP2Q13103 211 aa12.78□□□□□ -0.36
KDM5A-211ENST00000544777 C9orf50Q5SZB4 431 aa12.78□□□□□ -0.36
KDM5A-211ENST00000544777 SH3BP5LQ7L8J4 393 aa12.78□□□□□ -0.36
KDM5A-211ENST00000544777 VGLL2Q8N8G2 317 aa12.78□□□□□ -0.36
KDM5A-211ENST00000544777 SUCLG2Q96I99 432 aa12.78□□□□□ -0.36
KDM5A-211ENST00000544777 TBC1D2Q9BYX2 928 aa12.78□□□□□ -0.36
KDM5A-211ENST00000544777 DDTLA6NHG4 134 aaPredicted RBP12.77□□□□□ -0.37
KDM5A-211ENST00000544777 ALDH1L1O75891 902 aa12.77□□□□□ -0.37
KDM5A-211ENST00000544777 SLURP2P0DP57 97 aa12.77□□□□□ -0.37
KDM5A-211ENST00000544777 RGS2P41220 211 aa12.77□□□□□ -0.37
KDM5A-211ENST00000544777 RTP1P59025 263 aa12.77□□□□□ -0.37
KDM5A-211ENST00000544777 PUM3Q15397 648 aaKnown RBP12.77□□□□□ -0.37
KDM5A-211ENST00000544777 CCAR1Q8IX12 1150 aaKnown RBP12.77□□□□□ -0.37
KDM5A-211ENST00000544777 ZNF280CQ8ND82 737 aa12.77□□□□□ -0.37
KDM5A-211ENST00000544777 SLC5A1P13866 664 aa12.76□□□□□ -0.37
KDM5A-211ENST00000544777 FGFR2P21802 821 aa12.76□□□□□ -0.37
KDM5A-211ENST00000544777 MAPK4P31152 587 aa12.76□□□□□ -0.37
KDM5A-211ENST00000544777 HOXD11P31277 338 aaPredicted RBP12.76□□□□□ -0.37
KDM5A-211ENST00000544777 IRX3P78415 501 aaPredicted RBP12.76□□□□□ -0.37
KDM5A-211ENST00000544777 MAP3K12Q12852 859 aa12.76□□□□□ -0.37
KDM5A-211ENST00000544777 CCL14Q16627 93 aa12.76□□□□□ -0.37
KDM5A-211ENST00000544777 GPRC5AQ8NFJ5 357 aa12.76□□□□□ -0.37
KDM5A-211ENST00000544777 OSBPL5Q9H0X9 879 aaPredicted RBP12.76□□□□□ -0.37
KDM5A-211ENST00000544777 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.76□□□□□ -0.37
KDM5A-211ENST00000544777 ATP11BQ9Y2G3 1177 aa12.76□□□□□ -0.37
KDM5A-211ENST00000544777 TBC1D12O60347 775 aa12.75□□□□□ -0.37
KDM5A-211ENST00000544777 PICALMQ13492 652 aa12.75□□□□□ -0.37
KDM5A-211ENST00000544777 SLC4A10Q6U841 1118 aa12.75□□□□□ -0.37
KDM5A-211ENST00000544777 USP38Q8NB14 1042 aa12.75□□□□□ -0.37
KDM5A-211ENST00000544777 KAZALD1Q96I82 304 aa12.75□□□□□ -0.37
KDM5A-211ENST00000544777 SRCIN1Q9C0H9 1055 aa12.75□□□□□ -0.37
KDM5A-211ENST00000544777 PRDM5Q9NQX1 630 aaPredicted RBP12.75□□□□□ -0.37
KDM5A-211ENST00000544777 TCF20Q9UGU0 1960 aaKnown RBP12.75□□□□□ -0.37
KDM5A-211ENST00000544777 USP17L5A8MUK1 530 aa12.74□□□□□ -0.37
KDM5A-211ENST00000544777 MSCO60682 206 aa12.74□□□□□ -0.37
KDM5A-211ENST00000544777 VAMP4O75379 141 aa12.74□□□□□ -0.37
KDM5A-211ENST00000544777 SH3D19Q5HYK7 790 aa12.74□□□□□ -0.37
KDM5A-211ENST00000544777 MFSD14CQ5VZR4 134 aa12.74□□□□□ -0.37
KDM5A-211ENST00000544777 LPIN2Q92539 896 aa12.74□□□□□ -0.37
KDM5A-211ENST00000544777 USP6NLQ92738 828 aa12.74□□□□□ -0.37
KDM5A-211ENST00000544777 BADQ92934 168 aa12.74□□□□□ -0.37
KDM5A-211ENST00000544777 P2RX7Q99572 595 aaKnown RBP12.74□□□□□ -0.37
KDM5A-211ENST00000544777 APBA2Q99767 749 aa12.74□□□□□ -0.37
KDM5A-211ENST00000544777 BICC1Q9H694 974 aaKnown RBP12.74□□□□□ -0.37
KDM5A-211ENST00000544777 AS3MTQ9HBK9 375 aa12.74□□□□□ -0.37
KDM5A-211ENST00000544777 CWC22Q9HCG8 908 aaKnown RBP12.74□□□□□ -0.37
KDM5A-211ENST00000544777 GNL3LQ9NVN8 582 aaKnown RBP12.74□□□□□ -0.37
KDM5A-211ENST00000544777 SALL1Q9NSC2 1324 aa12.73□□□□□ -0.37
KDM5A-211ENST00000544777 DNM1LO00429 736 aa12.73□□□□□ -0.37
KDM5A-211ENST00000544777 NBPF7P0C2Y1 421 aaPredicted RBP12.73□□□□□ -0.37
KDM5A-211ENST00000544777 CNGA1P29973 690 aa12.73□□□□□ -0.37
KDM5A-211ENST00000544777 GRIN2CQ14957 1233 aa12.73□□□□□ -0.37
KDM5A-211ENST00000544777 RABL6Q3YEC7 729 aaPredicted RBP12.73□□□□□ -0.37
KDM5A-211ENST00000544777 MORN1Q5T089 497 aa12.73□□□□□ -0.37
KDM5A-211ENST00000544777 GPR142Q7Z601 462 aa12.73□□□□□ -0.37
KDM5A-211ENST00000544777 PLEKHH3Q7Z736 793 aa12.73□□□□□ -0.37
KDM5A-211ENST00000544777 SLF2Q8IX21 1173 aa12.73□□□□□ -0.37
KDM5A-211ENST00000544777 KLHDC4Q8TBB5 520 aa12.73□□□□□ -0.37
KDM5A-211ENST00000544777 ATXN2LQ8WWM7 1075 aaKnown RBP12.73□□□□□ -0.37
KDM5A-211ENST00000544777 LPAR1Q92633 364 aa12.73□□□□□ -0.37
KDM5A-211ENST00000544777 TXNRD2Q9NNW7 524 aa12.73□□□□□ -0.37
KDM5A-211ENST00000544777 DDX4Q9NQI0 724 aaKnown RBP12.73□□□□□ -0.37
KDM5A-211ENST00000544777 TMOD4Q9NZQ9 345 aa12.73□□□□□ -0.37
KDM5A-211ENST00000544777 DDX20Q9UHI6 824 aaKnown RBP12.73□□□□□ -0.37
KDM5A-211ENST00000544777 DNAH12Q6ZR08 3092 aa12.73□□□□□ -0.37
KDM5A-211ENST00000544777 RFX7Q2KHR2 1363 aa12.72□□□□□ -0.37
KDM5A-211ENST00000544777 GAKO14976 1311 aa12.72□□□□□ -0.37
KDM5A-211ENST00000544777 FAM196BA6NMK8 535 aa12.72□□□□□ -0.37
KDM5A-211ENST00000544777 PEX10O60683 326 aa12.72□□□□□ -0.37
KDM5A-211ENST00000544777 HOXA7P31268 230 aaPredicted RBP12.72□□□□□ -0.37
KDM5A-211ENST00000544777 CAP2P40123 477 aa12.72□□□□□ -0.37
KDM5A-211ENST00000544777 HERVK_113P62684 666 aa12.72□□□□□ -0.37
KDM5A-211ENST00000544777 ERVK-9P63128 1117 aa12.72□□□□□ -0.37
KDM5A-211ENST00000544777 ERVK-24P63145 666 aa12.72□□□□□ -0.37
KDM5A-211ENST00000544777 SLC39A5Q6ZMH5 540 aa12.72□□□□□ -0.37
KDM5A-211ENST00000544777 WWC1Q8IX03 1113 aa12.72□□□□□ -0.37
KDM5A-211ENST00000544777 ZGPATQ8N5A5 531 aaKnown RBP12.72□□□□□ -0.37
KDM5A-211ENST00000544777 EDC3Q96F86 508 aaKnown RBP12.72□□□□□ -0.37
KDM5A-211ENST00000544777 RNPC3Q96LT9 517 aaKnown RBP12.72□□□□□ -0.37
KDM5A-211ENST00000544777 DENND2AQ9ULE3 1009 aa12.72□□□□□ -0.37
KDM5A-211ENST00000544777 CDH23Q9H251 3354 aa12.72□□□□□ -0.37
KDM5A-211ENST00000544777 MUC3AQ02505 3323 aa12.72□□□□□ -0.37
KDM5A-211ENST00000544777 IL16Q14005 1332 aa12.71□□□□□ -0.37
KDM5A-211ENST00000544777 MAP2K5Q13163 448 aa12.71□□□□□ -0.37
KDM5A-211ENST00000544777 CCDC27Q2M243 656 aa12.71□□□□□ -0.37
KDM5A-211ENST00000544777 Q3C1V9 767 aa12.71□□□□□ -0.37
KDM5A-211ENST00000544777 DZIP1Q86YF9 867 aaKnown RBP12.71□□□□□ -0.37
KDM5A-211ENST00000544777 IL27Q8NEV9 243 aa12.71□□□□□ -0.37
KDM5A-211ENST00000544777 ADAMTS19Q8TE59 1207 aa12.71□□□□□ -0.37
KDM5A-211ENST00000544777 PPM1EQ8WY54 764 aa12.71□□□□□ -0.37
KDM5A-211ENST00000544777 ASB2Q96Q27 587 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms