RNA–Protein interactions for RNA: ENST00000544004.1

AP000439.1-201, humanhuman

TSL 4 BASIC

Gene AP000439.1, Length 581 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000439.1-201ENST00000544004 FRMPD3Q5JV73 1810 aa14.13□□□□□ -0.15
AP000439.1-201ENST00000544004 RFX7Q2KHR2 1363 aa14.13□□□□□ -0.15
AP000439.1-201ENST00000544004 DNAH12Q6ZR08 3092 aa14.13□□□□□ -0.15
AP000439.1-201ENST00000544004 HMGCS2P54868 508 aa14.13□□□□□ -0.15
AP000439.1-201ENST00000544004 CACNB2Q08289 660 aaPredicted RBP14.13□□□□□ -0.15
AP000439.1-201ENST00000544004 PICALMQ13492 652 aa14.13□□□□□ -0.15
AP000439.1-201ENST00000544004 ZNF280CQ8ND82 737 aa14.13□□□□□ -0.15
AP000439.1-201ENST00000544004 NUDT12Q9BQG2 462 aa14.13□□□□□ -0.15
AP000439.1-201ENST00000544004 DDX4Q9NQI0 724 aaKnown RBP14.13□□□□□ -0.15
AP000439.1-201ENST00000544004 MAST2Q6P0Q8 1798 aa14.13□□□□□ -0.15
AP000439.1-201ENST00000544004 SALL1Q9NSC2 1324 aa14.13□□□□□ -0.15
AP000439.1-201ENST00000544004 XRCC5P13010 732 aaKnown RBP14.12□□□□□ -0.15
AP000439.1-201ENST00000544004 COL9A1P20849 921 aa14.12□□□□□ -0.15
AP000439.1-201ENST00000544004 CCND3P30281 292 aaPredicted RBP14.12□□□□□ -0.15
AP000439.1-201ENST00000544004 LHX8Q68G74 356 aa14.12□□□□□ -0.15
AP000439.1-201ENST00000544004 SEMA6BQ9H3T3 888 aa14.12□□□□□ -0.15
AP000439.1-201ENST00000544004 MORF4L1Q9UBU8 362 aa14.12□□□□□ -0.15
AP000439.1-201ENST00000544004 GAKO14976 1311 aa14.12□□□□□ -0.15
AP000439.1-201ENST00000544004 CDH23Q9H251 3354 aa14.11□□□□□ -0.15
AP000439.1-201ENST00000544004 FAM196BA6NMK8 535 aa14.11□□□□□ -0.15
AP000439.1-201ENST00000544004 EYA2O00167 538 aa14.11□□□□□ -0.15
AP000439.1-201ENST00000544004 TBC1D12O60347 775 aa14.11□□□□□ -0.15
AP000439.1-201ENST00000544004 PEX10O60683 326 aa14.11□□□□□ -0.15
AP000439.1-201ENST00000544004 ZKSCAN1P17029 563 aaPredicted RBP14.11□□□□□ -0.15
AP000439.1-201ENST00000544004 SOCS4Q8WXH5 440 aa14.11□□□□□ -0.15
AP000439.1-201ENST00000544004 MYLIPQ8WY64 445 aa14.11□□□□□ -0.15
AP000439.1-201ENST00000544004 SYMPKQ92797 1274 aaKnown RBP14.11□□□□□ -0.15
AP000439.1-201ENST00000544004 SENP6Q9GZR1 1112 aaPredicted RBP14.11□□□□□ -0.15
AP000439.1-201ENST00000544004 OSBPL5Q9H0X9 879 aaPredicted RBP14.11□□□□□ -0.15
AP000439.1-201ENST00000544004 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.11□□□□□ -0.15
AP000439.1-201ENST00000544004 GNL3LQ9NVN8 582 aaKnown RBP14.11□□□□□ -0.15
AP000439.1-201ENST00000544004 DENND2AQ9ULE3 1009 aa14.11□□□□□ -0.15
AP000439.1-201ENST00000544004 LTBP2Q14767 1821 aa14.11□□□□□ -0.15
AP000439.1-201ENST00000544004 TRMT44Q8IYL2 757 aaKnown RBP14.1□□□□□ -0.15
AP000439.1-201ENST00000544004 TBC1D2Q9BYX2 928 aa14.1□□□□□ -0.15
AP000439.1-201ENST00000544004 IRX3P78415 501 aaPredicted RBP14.09□□□□□ -0.15
AP000439.1-201ENST00000544004 PDE3AQ14432 1141 aa14.09□□□□□ -0.15
AP000439.1-201ENST00000544004 CCL14Q16627 93 aa14.09□□□□□ -0.15
AP000439.1-201ENST00000544004 SH3D19Q5HYK7 790 aa14.09□□□□□ -0.15
AP000439.1-201ENST00000544004 DZIP1Q86YF9 867 aaKnown RBP14.09□□□□□ -0.15
AP000439.1-201ENST00000544004 ZGPATQ8N5A5 531 aaKnown RBP14.09□□□□□ -0.15
AP000439.1-201ENST00000544004 P2RX7Q99572 595 aaKnown RBP14.09□□□□□ -0.15
AP000439.1-201ENST00000544004 TXNRD2Q9NNW7 524 aa14.09□□□□□ -0.15
AP000439.1-201ENST00000544004 PRKAG2Q9UGJ0 569 aa14.09□□□□□ -0.15
AP000439.1-201ENST00000544004 SALL2Q9Y467 1007 aaPredicted RBP14.09□□□□□ -0.15
AP000439.1-201ENST00000544004 MUC3AQ02505 3323 aa14.08□□□□□ -0.15
AP000439.1-201ENST00000544004 USP17L5A8MUK1 530 aa14.08□□□□□ -0.16
AP000439.1-201ENST00000544004 SEMA3EO15041 775 aa14.08□□□□□ -0.16
AP000439.1-201ENST00000544004 BTDP43251 543 aa14.08□□□□□ -0.16
AP000439.1-201ENST00000544004 PHKA1P46020 1223 aa14.08□□□□□ -0.16
AP000439.1-201ENST00000544004 RFX5P48382 616 aaPredicted RBP14.08□□□□□ -0.16
AP000439.1-201ENST00000544004 ATN1P54259 1190 aaPredicted RBP14.08□□□□□ -0.16
AP000439.1-201ENST00000544004 SHHQ15465 462 aa14.08□□□□□ -0.16
AP000439.1-201ENST00000544004 ATP2B3Q16720 1220 aa14.08□□□□□ -0.16
AP000439.1-201ENST00000544004 NCBP3Q53F19 620 aaKnown RBP14.08□□□□□ -0.16
AP000439.1-201ENST00000544004 ATG9AQ7Z3C6 839 aa14.08□□□□□ -0.16
AP000439.1-201ENST00000544004 WDR63Q8IWG1 891 aa14.08□□□□□ -0.16
AP000439.1-201ENST00000544004 SLF2Q8IX21 1173 aa14.08□□□□□ -0.16
AP000439.1-201ENST00000544004 GPRC5AQ8NFJ5 357 aa14.08□□□□□ -0.16
AP000439.1-201ENST00000544004 USP6NLQ92738 828 aa14.08□□□□□ -0.16
AP000439.1-201ENST00000544004 FOSL2P15408 326 aa14.07□□□□□ -0.16
AP000439.1-201ENST00000544004 MAPK4P31152 587 aa14.07□□□□□ -0.16
AP000439.1-201ENST00000544004 CAP2P40123 477 aa14.07□□□□□ -0.16
AP000439.1-201ENST00000544004 RGS2P41220 211 aa14.07□□□□□ -0.16
AP000439.1-201ENST00000544004 RRP1BQ14684 758 aaKnown RBP14.07□□□□□ -0.16
AP000439.1-201ENST00000544004 CCDC184Q52MB2 194 aa14.07□□□□□ -0.16
AP000439.1-201ENST00000544004 C9orf50Q5SZB4 431 aa14.07□□□□□ -0.16
AP000439.1-201ENST00000544004 CCAR1Q8IX12 1150 aaKnown RBP14.07□□□□□ -0.16
AP000439.1-201ENST00000544004 FAM163AQ96GL9 167 aaPredicted RBP14.07□□□□□ -0.16
AP000439.1-201ENST00000544004 TTYH1Q9H313 450 aaPredicted RBP14.07□□□□□ -0.16
AP000439.1-201ENST00000544004 AS3MTQ9HBK9 375 aa14.07□□□□□ -0.16
AP000439.1-201ENST00000544004 ABCF2Q9UG63 623 aa14.07□□□□□ -0.16
AP000439.1-201ENST00000544004 HOXA7P31268 230 aaPredicted RBP14.06□□□□□ -0.16
AP000439.1-201ENST00000544004 RHBDL3P58872 404 aa14.06□□□□□ -0.16
AP000439.1-201ENST00000544004 HERVK_113P62684 666 aa14.06□□□□□ -0.16
AP000439.1-201ENST00000544004 MTMR2Q13614 643 aa14.06□□□□□ -0.16
AP000439.1-201ENST00000544004 Q3C1V9 767 aa14.06□□□□□ -0.16
AP000439.1-201ENST00000544004 MORN1Q5T089 497 aa14.06□□□□□ -0.16
AP000439.1-201ENST00000544004 GPR142Q7Z601 462 aa14.06□□□□□ -0.16
AP000439.1-201ENST00000544004 PORCNQ9H237 461 aa14.06□□□□□ -0.16
AP000439.1-201ENST00000544004 TMOD4Q9NZQ9 345 aa14.06□□□□□ -0.16
AP000439.1-201ENST00000544004 RBPJLQ9UBG7 517 aa14.06□□□□□ -0.16
AP000439.1-201ENST00000544004 MROH7-TTC4A0A0A0MT08 1334 aa14.06□□□□□ -0.16
AP000439.1-201ENST00000544004 NPM3O75607 178 aaKnown RBP14.05□□□□□ -0.16
AP000439.1-201ENST00000544004 BACE1P56817 501 aa14.05□□□□□ -0.16
AP000439.1-201ENST00000544004 RTP1P59025 263 aa14.05□□□□□ -0.16
AP000439.1-201ENST00000544004 ERVK-9P63128 1117 aa14.05□□□□□ -0.16
AP000439.1-201ENST00000544004 ERVK-24P63145 666 aa14.05□□□□□ -0.16
AP000439.1-201ENST00000544004 APBA2Q99767 749 aa14.05□□□□□ -0.16
AP000439.1-201ENST00000544004 USP44Q9H0E7 712 aa14.05□□□□□ -0.16
AP000439.1-201ENST00000544004 SIL1Q9H173 461 aa14.05□□□□□ -0.16
AP000439.1-201ENST00000544004 CEP126Q9P2H0 1117 aa14.05□□□□□ -0.16
AP000439.1-201ENST00000544004 RAPGEFL1Q9UHV5 662 aa14.05□□□□□ -0.16
AP000439.1-201ENST00000544004 RLFQ13129 1914 aa14.04□□□□□ -0.16
AP000439.1-201ENST00000544004 GPR75-ASB3A0A0A6YYF3 556 aa14.04□□□□□ -0.16
AP000439.1-201ENST00000544004 TNFRSF10AO00220 468 aa14.04□□□□□ -0.16
AP000439.1-201ENST00000544004 SMAD3P84022 425 aaKnown RBP14.04□□□□□ -0.16
AP000439.1-201ENST00000544004 TJAP1Q5JTD0 557 aa14.04□□□□□ -0.16
AP000439.1-201ENST00000544004 CCDC102BQ68D86 513 aa14.04□□□□□ -0.16
AP000439.1-201ENST00000544004 PLEKHH3Q7Z736 793 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms