RNA–Protein interactions for RNA: ENST00000543637.1

NUP43-206, Transcript of nucleoporin 43, humanhuman

TSL 5

Gene NUP43, Length 576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-206ENST00000543637 APBB1O00213 710 aa8.72□□□□□ -1.01
NUP43-206ENST00000543637 RAB11FIP3O75154 756 aa8.72□□□□□ -1.01
NUP43-206ENST00000543637 HLA-DOAP06340 250 aa8.72□□□□□ -1.01
NUP43-206ENST00000543637 CYP7A1P22680 504 aa8.72□□□□□ -1.01
NUP43-206ENST00000543637 DSG3P32926 999 aa8.72□□□□□ -1.01
NUP43-206ENST00000543637 USP5P45974 858 aa8.72□□□□□ -1.01
NUP43-206ENST00000543637 PPP4CP60510 307 aa8.72□□□□□ -1.01
NUP43-206ENST00000543637 LACTBP83111 547 aaPredicted RBP8.72□□□□□ -1.01
NUP43-206ENST00000543637 PABPC4Q13310 644 aaKnown RBP eCLIP8.72□□□□□ -1.01
NUP43-206ENST00000543637 SLC4A8Q2Y0W8 1093 aa8.72□□□□□ -1.01
NUP43-206ENST00000543637 SLC9C1Q4G0N8 1177 aa8.72□□□□□ -1.01
NUP43-206ENST00000543637 TMED8Q6PL24 325 aaPredicted RBP8.72□□□□□ -1.01
NUP43-206ENST00000543637 SH3BP5LQ7L8J4 393 aa8.72□□□□□ -1.01
NUP43-206ENST00000543637 RHPN1Q8TCX5 695 aa8.72□□□□□ -1.01
NUP43-206ENST00000543637 SH3RF3Q8TEJ3 882 aaPredicted RBP8.72□□□□□ -1.01
NUP43-206ENST00000543637 EAF2Q96CJ1 260 aaPredicted RBP8.72□□□□□ -1.01
NUP43-206ENST00000543637 KIF1BPQ96EK5 621 aa8.72□□□□□ -1.01
NUP43-206ENST00000543637 PARK7Q99497 189 aaKnown RBP8.72□□□□□ -1.01
NUP43-206ENST00000543637 CPA4Q9UI42 421 aa8.72□□□□□ -1.01
NUP43-206ENST00000543637 AFG3L2Q9Y4W6 797 aa8.72□□□□□ -1.01
NUP43-206ENST00000543637 FOCADQ5VW36 1801 aa8.72□□□□□ -1.01
NUP43-206ENST00000543637 PHIPQ8WWQ0 1821 aa8.71□□□□□ -1.01
NUP43-206ENST00000543637 TRIM75PA6NK02 468 aa8.71□□□□□ -1.02
NUP43-206ENST00000543637 USP17L5A8MUK1 530 aa8.71□□□□□ -1.02
NUP43-206ENST00000543637 ECM2O94769 699 aaPredicted RBP8.71□□□□□ -1.02
NUP43-206ENST00000543637 OSBPP22059 807 aa8.71□□□□□ -1.02
NUP43-206ENST00000543637 CAP2P40123 477 aa8.71□□□□□ -1.02
NUP43-206ENST00000543637 PSMC4P43686 418 aa8.71□□□□□ -1.02
NUP43-206ENST00000543637 C17orf99Q6UX52 265 aa8.71□□□□□ -1.02
NUP43-206ENST00000543637 SMCR8Q8TEV9 937 aaPredicted RBP8.71□□□□□ -1.02
NUP43-206ENST00000543637 IL1RAPL2Q9NP60 686 aa8.71□□□□□ -1.02
NUP43-206ENST00000543637 BIN2Q9UBW5 565 aaPredicted RBP8.71□□□□□ -1.02
NUP43-206ENST00000543637 DBNLQ9UJU6 430 aaKnown RBP8.71□□□□□ -1.02
NUP43-206ENST00000543637 PNMA3Q9UL41 463 aa8.71□□□□□ -1.02
NUP43-206ENST00000543637 SLC45A1Q9Y2W3 748 aa8.71□□□□□ -1.02
NUP43-206ENST00000543637 ATRNL1Q5VV63 1379 aa8.71□□□□□ -1.02
NUP43-206ENST00000543637 PTPRFP10586 1907 aa8.7□□□□□ -1.02
NUP43-206ENST00000543637 A0A0G2JLL6 359 aaPredicted RBP8.7□□□□□ -1.02
NUP43-206ENST00000543637 FCGRTP55899 365 aa8.7□□□□□ -1.02
NUP43-206ENST00000543637 SPP2Q13103 211 aa8.7□□□□□ -1.02
NUP43-206ENST00000543637 PDE3AQ14432 1141 aa8.7□□□□□ -1.02
NUP43-206ENST00000543637 GPAT2Q6NUI2 795 aa8.7□□□□□ -1.02
NUP43-206ENST00000543637 PRRT2Q7Z6L0 340 aaPredicted RBP8.7□□□□□ -1.02
NUP43-206ENST00000543637 TTC6Q86TZ1 520 aa8.7□□□□□ -1.02
NUP43-206ENST00000543637 MAPKAPK5Q8IW41 473 aa8.7□□□□□ -1.02
NUP43-206ENST00000543637 MAGEB6Q8N7X4 407 aa8.7□□□□□ -1.02
NUP43-206ENST00000543637 PROCA1Q8NCQ7 364 aaPredicted RBP8.7□□□□□ -1.02
NUP43-206ENST00000543637 ZNF280CQ8ND82 737 aa8.7□□□□□ -1.02
NUP43-206ENST00000543637 RAET1EQ8TD07 263 aa8.7□□□□□ -1.02
NUP43-206ENST00000543637 ZNF384Q8TF68 577 aa8.7□□□□□ -1.02
NUP43-206ENST00000543637 TRIM47Q96LD4 638 aa8.7□□□□□ -1.02
NUP43-206ENST00000543637 GINM1Q9NU53 330 aa8.7□□□□□ -1.02
NUP43-206ENST00000543637 ZBTB40Q9NUA8 1239 aa8.7□□□□□ -1.02
NUP43-206ENST00000543637 TMOD4Q9NZQ9 345 aa8.7□□□□□ -1.02
NUP43-206ENST00000543637 PTCH2Q9Y6C5 1203 aa8.7□□□□□ -1.02
NUP43-206ENST00000543637 COL2A1P02458 1487 aaPredicted RBP8.7□□□□□ -1.02
NUP43-206ENST00000543637 FAM196BA6NMK8 535 aa8.69□□□□□ -1.02
NUP43-206ENST00000543637 C19orf81C9J6K1 198 aa8.69□□□□□ -1.02
NUP43-206ENST00000543637 POLR3DP05423 398 aaPredicted RBP8.69□□□□□ -1.02
NUP43-206ENST00000543637 ASNSP08243 561 aa8.69□□□□□ -1.02
NUP43-206ENST00000543637 CYP2C8P10632 490 aa8.69□□□□□ -1.02
NUP43-206ENST00000543637 DYNLL1P63167 89 aaKnown RBP8.69□□□□□ -1.02
NUP43-206ENST00000543637 UBXN2AP68543 259 aa8.69□□□□□ -1.02
NUP43-206ENST00000543637 CABP5Q9NP86 173 aa8.69□□□□□ -1.02
NUP43-206ENST00000543637 PIH1D3Q9NQM4 214 aaKnown RBP8.69□□□□□ -1.02
NUP43-206ENST00000543637 TLR7Q9NYK1 1049 aaKnown RBP8.69□□□□□ -1.02
NUP43-206ENST00000543637 SRRDQ9UH36 339 aa8.69□□□□□ -1.02
NUP43-206ENST00000543637 PALD1Q9ULE6 856 aa8.69□□□□□ -1.02
NUP43-206ENST00000543637 RBBP6Q7Z6E9 1792 aaKnown RBP8.68□□□□□ -1.02
NUP43-206ENST00000543637 MYH8P13535 1937 aa8.68□□□□□ -1.02
NUP43-206ENST00000543637 MAGEB6P1A0A0J9YX57 407 aa8.68□□□□□ -1.02
NUP43-206ENST00000543637 GRK4P32298 578 aa8.68□□□□□ -1.02
NUP43-206ENST00000543637 GCLCP48506 637 aaPredicted RBP8.68□□□□□ -1.02
NUP43-206ENST00000543637 MOGSQ13724 837 aa8.68□□□□□ -1.02
NUP43-206ENST00000543637 SLC9C2Q5TAH2 1124 aa8.68□□□□□ -1.02
NUP43-206ENST00000543637 CCAR1Q8IX12 1150 aaKnown RBP8.68□□□□□ -1.02
NUP43-206ENST00000543637 MIGA1Q8NAN2 632 aa8.68□□□□□ -1.02
NUP43-206ENST00000543637 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.68□□□□□ -1.02
NUP43-206ENST00000543637 COA7Q96BR5 231 aa8.68□□□□□ -1.02
NUP43-206ENST00000543637 ARMC5Q96C12 935 aa8.68□□□□□ -1.02
NUP43-206ENST00000543637 DNAJC2Q99543 621 aaKnown RBP8.68□□□□□ -1.02
NUP43-206ENST00000543637 CRNKL1Q9BZJ0 848 aaKnown RBP8.68□□□□□ -1.02
NUP43-206ENST00000543637 ARHGAP39Q9C0H5 1083 aa8.68□□□□□ -1.02
NUP43-206ENST00000543637 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.68□□□□□ -1.025e-7■■□□□ 12.6
NUP43-206ENST00000543637 SAP30BPQ9UHR5 308 aaKnown RBP8.68□□□□□ -1.02
NUP43-206ENST00000543637 AGTPBP1Q9UPW5 1226 aa8.68□□□□□ -1.02
NUP43-206ENST00000543637 MYPNQ86TC9 1320 aa8.68□□□□□ -1.02
NUP43-206ENST00000543637 RFX7Q2KHR2 1363 aa8.68□□□□□ -1.02
NUP43-206ENST00000543637 ZSWIM8A7E2V4 1837 aa8.68□□□□□ -1.02
NUP43-206ENST00000543637 POTEFA5A3E0 1075 aa8.67□□□□□ -1.02
NUP43-206ENST00000543637 USP17L10C9JJH3 530 aa8.67□□□□□ -1.02
NUP43-206ENST00000543637 GOLIM4O00461 696 aa8.67□□□□□ -1.02
NUP43-206ENST00000543637 TNPO2O14787 897 aaKnown RBP8.67□□□□□ -1.02
NUP43-206ENST00000543637 MYCP01106 439 aaPredicted RBP8.67□□□□□ -1.02
NUP43-206ENST00000543637 SLURP2P0DP57 97 aa8.67□□□□□ -1.02
NUP43-206ENST00000543637 BCRP11274 1271 aa8.67□□□□□ -1.02
NUP43-206ENST00000543637 MYH7P12883 1935 aa8.67□□□□□ -1.02
NUP43-206ENST00000543637 FLT1P17948 1338 aa8.67□□□□□ -1.02
NUP43-206ENST00000543637 HMGCS2P54868 508 aa8.67□□□□□ -1.02
NUP43-206ENST00000543637 IRX3P78415 501 aaPredicted RBP8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms