RNA–Protein interactions for RNA: ENST00000543473.1

SUDS3-204, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUDS3, Length 4,897 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-204ENST00000543473 WWC3Q9ULE0 1092 aa21.73■■□□□ 1.07
SUDS3-204ENST00000543473 E7EWF7 191 aa21.73■■□□□ 1.07
SUDS3-204ENST00000543473 PRPHP41219 470 aa21.73■■□□□ 1.07
SUDS3-204ENST00000543473 PAK1Q13153 545 aa21.73■■□□□ 1.07
SUDS3-204ENST00000543473 SECISBP2LQ93073 1101 aaKnown RBP21.73■■□□□ 1.07
SUDS3-204ENST00000543473 SPTLC3Q9NUV7 552 aa21.73■■□□□ 1.07
SUDS3-204ENST00000543473 TPTE2Q6XPS3 522 aa21.73■■□□□ 1.07
SUDS3-204ENST00000543473 TBC1D5Q92609 795 aa21.73■■□□□ 1.07
SUDS3-204ENST00000543473 APPBP2Q92624 585 aa21.73■■□□□ 1.07
SUDS3-204ENST00000543473 ARHGAP31Q2M1Z3 1444 aa21.73■■□□□ 1.07
SUDS3-204ENST00000543473 EYA2O00167 538 aa21.73■■□□□ 1.07
SUDS3-204ENST00000543473 ATP8B1O43520 1251 aa21.72■■□□□ 1.07
SUDS3-204ENST00000543473 WHAMMP3Q1A5X7 153 aa21.72■■□□□ 1.07
SUDS3-204ENST00000543473 C6orf163Q5TEZ5 329 aa21.72■■□□□ 1.07
SUDS3-204ENST00000543473 MAGEB6Q8N7X4 407 aa21.72■■□□□ 1.07
SUDS3-204ENST00000543473 RABGGTAQ92696 567 aa21.72■■□□□ 1.07
SUDS3-204ENST00000543473 IQGAP3Q86VI3 1631 aa21.72■■□□□ 1.07
SUDS3-204ENST00000543473 CTNNA2P26232 953 aa21.72■■□□□ 1.07
SUDS3-204ENST00000543473 STXBP4Q6ZWJ1 553 aa21.72■■□□□ 1.07
SUDS3-204ENST00000543473 CCDC77Q9BR77 488 aa21.72■■□□□ 1.07
SUDS3-204ENST00000543473 TBCAO75347 108 aaKnown RBP21.72■■□□□ 1.07
SUDS3-204ENST00000543473 IFT20Q8IY31 132 aa21.72■■□□□ 1.07
SUDS3-204ENST00000543473 TTC14Q96N46 770 aa21.72■■□□□ 1.07
SUDS3-204ENST00000543473 FANCLQ9NW38 375 aa21.72■■□□□ 1.07
SUDS3-204ENST00000543473 PFKFB2O60825 505 aa21.72■■□□□ 1.07
SUDS3-204ENST00000543473 BAG3O95817 575 aa21.72■■□□□ 1.07
SUDS3-204ENST00000543473 NAPAP54920 295 aa21.72■■□□□ 1.07
SUDS3-204ENST00000543473 AATKQ6ZMQ8 1374 aa21.72■■□□□ 1.07
SUDS3-204ENST00000543473 MIGA1Q8NAN2 632 aa21.71■■□□□ 1.07
SUDS3-204ENST00000543473 ATP5JP18859 108 aa21.71■■□□□ 1.07
SUDS3-204ENST00000543473 EAF2Q96CJ1 260 aaPredicted RBP21.71■■□□□ 1.07
SUDS3-204ENST00000543473 ZNF274Q96GC6 653 aaPredicted RBP21.71■■□□□ 1.07
SUDS3-204ENST00000543473 ATP7BP35670 1465 aa21.71■■□□□ 1.07
SUDS3-204ENST00000543473 GPAA1O43292 621 aa21.71■■□□□ 1.07
SUDS3-204ENST00000543473 KCNQ3O43525 872 aa21.71■■□□□ 1.07
SUDS3-204ENST00000543473 SEC31AO94979 1220 aaKnown RBP21.71■■□□□ 1.07
SUDS3-204ENST00000543473 NDUFA8P51970 172 aa21.71■■□□□ 1.07
SUDS3-204ENST00000543473 TNIP1Q15025 636 aa21.71■■□□□ 1.07
SUDS3-204ENST00000543473 SYCP3Q8IZU3 236 aa21.71■■□□□ 1.07
SUDS3-204ENST00000543473 SAR1BQ9Y6B6 198 aa21.71■■□□□ 1.07
SUDS3-204ENST00000543473 CMA1P23946 247 aa21.71■■□□□ 1.07
SUDS3-204ENST00000543473 C11orf57Q6ZUT1 292 aaPredicted RBP21.71■■□□□ 1.07
SUDS3-204ENST00000543473 DNAJC10Q8IXB1 793 aa21.71■■□□□ 1.07
SUDS3-204ENST00000543473 TSPY3P0CV98 308 aa21.7■■□□□ 1.06
SUDS3-204ENST00000543473 TSPY8P0CW00 308 aa21.7■■□□□ 1.06
SUDS3-204ENST00000543473 CSGALNACT2Q8N6G5 542 aa21.7■■□□□ 1.06
SUDS3-204ENST00000543473 RPGRIP1Q96KN7 1286 aa21.7■■□□□ 1.06
SUDS3-204ENST00000543473 PDE11AQ9HCR9 933 aa21.7■■□□□ 1.06
SUDS3-204ENST00000543473 SYNMO15061 1565 aa21.7■■□□□ 1.06
SUDS3-204ENST00000543473 NCBP1Q09161 790 aaKnown RBP21.7■■□□□ 1.06
SUDS3-204ENST00000543473 KRT79Q5XKE5 535 aa21.7■■□□□ 1.06
SUDS3-204ENST00000543473 CLEC17AQ6ZS10 378 aa21.7■■□□□ 1.06
SUDS3-204ENST00000543473 DSCC1Q9BVC3 393 aa21.7■■□□□ 1.06
SUDS3-204ENST00000543473 FAM98CQ17RN3 349 aaKnown RBP21.7■■□□□ 1.06
SUDS3-204ENST00000543473 CCDC51Q96ER9 411 aa21.7■■□□□ 1.06
SUDS3-204ENST00000543473 CABS1Q96KC9 395 aa21.7■■□□□ 1.06
SUDS3-204ENST00000543473 MAP4K1Q92918 833 aa21.69■■□□□ 1.06
SUDS3-204ENST00000543473 CUL5Q93034 780 aa21.69■■□□□ 1.06
SUDS3-204ENST00000543473 USP6P35125 1406 aa21.69■■□□□ 1.06
SUDS3-204ENST00000543473 SERTAD1Q9UHV2 236 aa21.69■■□□□ 1.06
SUDS3-204ENST00000543473 GNPATO15228 680 aa21.69■■□□□ 1.06
SUDS3-204ENST00000543473 DESP17661 470 aa21.69■■□□□ 1.06
SUDS3-204ENST00000543473 MAP2K2P36507 400 aa21.69■■□□□ 1.06
SUDS3-204ENST00000543473 RNASE9P60153 205 aaKnown RBP21.69■■□□□ 1.06
SUDS3-204ENST00000543473 TERF2Q15554 542 aa21.69■■□□□ 1.06
SUDS3-204ENST00000543473 FBXO38Q6PIJ6 1188 aa21.69■■□□□ 1.06
SUDS3-204ENST00000543473 PSMB7Q99436 277 aa21.69■■□□□ 1.06
SUDS3-204ENST00000543473 NYXQ9GZU5 481 aa21.69■■□□□ 1.06
SUDS3-204ENST00000543473 MBD4O95243 580 aa21.69■■□□□ 1.06
SUDS3-204ENST00000543473 MYL10Q9BUA6 226 aa21.69■■□□□ 1.06
SUDS3-204ENST00000543473 NUP58Q9BVL2 599 aa21.69■■□□□ 1.06
SUDS3-204ENST00000543473 MTRF1LQ9UGC7 380 aaKnown RBP21.68■■□□□ 1.06
SUDS3-204ENST00000543473 MAGEB6P1A0A0J9YX57 407 aa21.68■■□□□ 1.06
SUDS3-204ENST00000543473 STX10O60499 249 aa21.68■■□□□ 1.06
SUDS3-204ENST00000543473 MED4Q9NPJ6 270 aa21.68■■□□□ 1.06
SUDS3-204ENST00000543473 PPP1R2P41236 205 aa21.68■■□□□ 1.06
SUDS3-204ENST00000543473 TMEM87AQ8NBN3 555 aa21.68■■□□□ 1.06
SUDS3-204ENST00000543473 DDX12PQ92771 950 aa21.68■■□□□ 1.06
SUDS3-204ENST00000543473 C6orf50Q9HD87 102 aa21.68■■□□□ 1.06
SUDS3-204ENST00000543473 GRIPAP1Q4V328 841 aa21.67■■□□□ 1.06
SUDS3-204ENST00000543473 TFCP2L1Q9NZI6 479 aa21.67■■□□□ 1.06
SUDS3-204ENST00000543473 VIMP08670 466 aaKnown RBP21.67■■□□□ 1.06
SUDS3-204ENST00000543473 PHKG2P15735 406 aa21.67■■□□□ 1.06
SUDS3-204ENST00000543473 CLCN6P51797 869 aa21.67■■□□□ 1.06
SUDS3-204ENST00000543473 PDE4DQ08499 809 aa21.67■■□□□ 1.06
SUDS3-204ENST00000543473 FCHSD1Q86WN1 690 aa21.67■■□□□ 1.06
SUDS3-204ENST00000543473 CCDC26Q8TAB7 109 aa21.67■■□□□ 1.06
SUDS3-204ENST00000543473 ERMNQ8TAM6 284 aa21.67■■□□□ 1.06
SUDS3-204ENST00000543473 FAM71BQ8TC56 605 aa21.67■■□□□ 1.06
SUDS3-204ENST00000543473 MAGEA1P43355 309 aa21.67■■□□□ 1.06
SUDS3-204ENST00000543473 STAMQ92783 540 aa21.67■■□□□ 1.06
SUDS3-204ENST00000543473 DCAF8L1A6NGE4 600 aa21.67■■□□□ 1.06
SUDS3-204ENST00000543473 LONRF2Q1L5Z9 754 aa21.67■■□□□ 1.06
SUDS3-204ENST00000543473 ARHGEF25Q86VW2 580 aa21.67■■□□□ 1.06
SUDS3-204ENST00000543473 NOX5Q96PH1 765 aa21.67■■□□□ 1.06
SUDS3-204ENST00000543473 PLCD1P51178 756 aa21.66■■□□□ 1.06
SUDS3-204ENST00000543473 PAK2Q13177 524 aa21.66■■□□□ 1.06
SUDS3-204ENST00000543473 RBM28Q9NW13 759 aaKnown RBP21.66■■□□□ 1.06
SUDS3-204ENST00000543473 A0A1W2PQ27 194 aa21.66■■□□□ 1.06
SUDS3-204ENST00000543473 A0A1W2PQ64 194 aa21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms