RNA–Protein interactions for RNA: ENST00000542841.1

SRGAP1-205, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 836 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-205ENST00000542841 IRF5Q13568 498 aa14.04□□□□□ -0.16
SRGAP1-205ENST00000542841 PRRT2Q7Z6L0 340 aaPredicted RBP14.04□□□□□ -0.16
SRGAP1-205ENST00000542841 SMCR8Q8TEV9 937 aaPredicted RBP14.04□□□□□ -0.16
SRGAP1-205ENST00000542841 BACH2Q9BYV9 841 aa14.04□□□□□ -0.16
SRGAP1-205ENST00000542841 PAK6Q9NQU5 681 aaPredicted RBP14.04□□□□□ -0.16
SRGAP1-205ENST00000542841 PICK1Q9NRD5 415 aa14.04□□□□□ -0.16
SRGAP1-205ENST00000542841 SLC45A1Q9Y2W3 748 aa14.04□□□□□ -0.16
SRGAP1-205ENST00000542841 DAGLAQ9Y4D2 1042 aa14.04□□□□□ -0.16
SRGAP1-205ENST00000542841 ZHX2Q9Y6X8 837 aa14.04□□□□□ -0.16
SRGAP1-205ENST00000542841 IL15P40933 162 aaPredicted RBP14.03□□□□□ -0.16
SRGAP1-205ENST00000542841 DIXDC1Q155Q3 683 aa14.03□□□□□ -0.16
SRGAP1-205ENST00000542841 GPR153Q6NV75 609 aa14.03□□□□□ -0.16
SRGAP1-205ENST00000542841 GADL1Q6ZQY3 521 aa14.03□□□□□ -0.16
SRGAP1-205ENST00000542841 NECAB2Q7Z6G3 386 aa14.03□□□□□ -0.16
SRGAP1-205ENST00000542841 SCYL3Q8IZE3 742 aa14.03□□□□□ -0.16
SRGAP1-205ENST00000542841 PAWRQ96IZ0 340 aaKnown RBP14.03□□□□□ -0.16
SRGAP1-205ENST00000542841 GPR108Q9NPR9 543 aa14.03□□□□□ -0.16
SRGAP1-205ENST00000542841 TSHZ2Q9NRE2 1034 aa14.03□□□□□ -0.16
SRGAP1-205ENST00000542841 USP40Q9NVE5 1235 aa14.03□□□□□ -0.16
SRGAP1-205ENST00000542841 TAOK2Q9UL54 1235 aa14.03□□□□□ -0.16
SRGAP1-205ENST00000542841 PA2G4Q9UQ80 394 aaKnown RBP14.03□□□□□ -0.16
SRGAP1-205ENST00000542841 TTC41PQ6P2S7 1318 aa14.03□□□□□ -0.16
SRGAP1-205ENST00000542841 MGAMO43451 1857 aa14.03□□□□□ -0.16
SRGAP1-205ENST00000542841 EYA2O00167 538 aa14.02□□□□□ -0.17
SRGAP1-205ENST00000542841 APBB1O00213 710 aa14.02□□□□□ -0.17
SRGAP1-205ENST00000542841 SMARCA5O60264 1052 aaPredicted RBP14.02□□□□□ -0.17
SRGAP1-205ENST00000542841 PTPRAP18433 802 aa14.02□□□□□ -0.17
SRGAP1-205ENST00000542841 MX1P20591 662 aa14.02□□□□□ -0.17
SRGAP1-205ENST00000542841 FGFR2P21802 821 aa14.02□□□□□ -0.17
SRGAP1-205ENST00000542841 BMP8BP34820 402 aa14.02□□□□□ -0.17
SRGAP1-205ENST00000542841 PDE1AP54750 535 aa14.02□□□□□ -0.17
SRGAP1-205ENST00000542841 C8orf34Q49A92 452 aa14.02□□□□□ -0.17
SRGAP1-205ENST00000542841 TTC22Q5TAA0 569 aa14.02□□□□□ -0.17
SRGAP1-205ENST00000542841 KLHDC4Q8TBB5 520 aa14.02□□□□□ -0.17
SRGAP1-205ENST00000542841 COA7Q96BR5 231 aa14.02□□□□□ -0.17
SRGAP1-205ENST00000542841 GPATCH3Q96I76 525 aa14.02□□□□□ -0.17
SRGAP1-205ENST00000542841 CRISPLD2Q9H0B8 497 aa14.02□□□□□ -0.17
SRGAP1-205ENST00000542841 FAM198AQ9UFP1 575 aa14.02□□□□□ -0.17
SRGAP1-205ENST00000542841 AFG3L2Q9Y4W6 797 aa14.02□□□□□ -0.17
SRGAP1-205ENST00000542841 PHF20L1A8MW92 1017 aa14.01□□□□□ -0.17
SRGAP1-205ENST00000542841 LDHBP07195 334 aaKnown RBP14.01□□□□□ -0.17
SRGAP1-205ENST00000542841 SLC5A1P13866 664 aa14.01□□□□□ -0.17
SRGAP1-205ENST00000542841 ANKLE1Q8NAG6 615 aa14.01□□□□□ -0.17
SRGAP1-205ENST00000542841 LPIN2Q92539 896 aa14.01□□□□□ -0.17
SRGAP1-205ENST00000542841 GDF15Q99988 308 aa14.01□□□□□ -0.17
SRGAP1-205ENST00000542841 AK9Q5TCS8 1911 aa14.01□□□□□ -0.17
SRGAP1-205ENST00000542841 PRDX5P30044 214 aa14□□□□□ -0.17
SRGAP1-205ENST00000542841 ZFPM1Q8IX07 1006 aa14□□□□□ -0.17
SRGAP1-205ENST00000542841 C7orf61Q8IZ16 206 aa14□□□□□ -0.17
SRGAP1-205ENST00000542841 DEFB123Q8N688 67 aa14□□□□□ -0.17
SRGAP1-205ENST00000542841 ANKRD13CQ8N6S4 541 aa14□□□□□ -0.17
SRGAP1-205ENST00000542841 IL1RAPL2Q9NP60 686 aa14□□□□□ -0.17
SRGAP1-205ENST00000542841 ATRNL1Q5VV63 1379 aa13.99□□□□□ -0.17
SRGAP1-205ENST00000542841 TRIM75PA6NK02 468 aa13.99□□□□□ -0.17
SRGAP1-205ENST00000542841 ERC2O15083 957 aa13.99□□□□□ -0.17
SRGAP1-205ENST00000542841 IFIT2P09913 472 aaKnown RBP13.99□□□□□ -0.17
SRGAP1-205ENST00000542841 ZSCAN29Q8IWY8 852 aaPredicted RBP13.99□□□□□ -0.17
SRGAP1-205ENST00000542841 DIS3LQ8TF46 1054 aaKnown RBP13.99□□□□□ -0.17
SRGAP1-205ENST00000542841 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.99□□□□□ -0.17
SRGAP1-205ENST00000542841 PNMA3Q9UL41 463 aa13.99□□□□□ -0.17
SRGAP1-205ENST00000542841 AGTPBP1Q9UPW5 1226 aa13.99□□□□□ -0.17
SRGAP1-205ENST00000542841 CTNND1O60716 968 aaKnown RBP13.98□□□□□ -0.17
SRGAP1-205ENST00000542841 ENTPD3O75355 529 aa13.98□□□□□ -0.17
SRGAP1-205ENST00000542841 LRIT3Q3SXY7 679 aa13.98□□□□□ -0.17
SRGAP1-205ENST00000542841 ATG9AQ7Z3C6 839 aa13.98□□□□□ -0.17
SRGAP1-205ENST00000542841 IDI2Q9BXS1 227 aa13.98□□□□□ -0.17
SRGAP1-205ENST00000542841 NBPF3Q9H094 633 aa13.98□□□□□ -0.17
SRGAP1-205ENST00000542841 SIL1Q9H173 461 aa13.98□□□□□ -0.17
SRGAP1-205ENST00000542841 GNL3LQ9NVN8 582 aaKnown RBP13.98□□□□□ -0.17
SRGAP1-205ENST00000542841 ZMYND8Q9ULU4 1186 aaPredicted RBP13.98□□□□□ -0.17
SRGAP1-205ENST00000542841 STXBP5LQ9Y2K9 1186 aa13.98□□□□□ -0.17
SRGAP1-205ENST00000542841 RPTORQ8N122 1335 aa13.97□□□□□ -0.17
SRGAP1-205ENST00000542841 GLRX3O76003 335 aaKnown RBP13.97□□□□□ -0.17
SRGAP1-205ENST00000542841 HMGCRP04035 888 aa13.97□□□□□ -0.17
SRGAP1-205ENST00000542841 MAP3K10Q02779 954 aa13.97□□□□□ -0.17
SRGAP1-205ENST00000542841 FAM110CQ1W6H9 321 aa13.97□□□□□ -0.17
SRGAP1-205ENST00000542841 TNNI3KQ59H18 835 aa13.97□□□□□ -0.17
SRGAP1-205ENST00000542841 Q7L0L9 218 aa13.97□□□□□ -0.17
SRGAP1-205ENST00000542841 AACSQ86V21 672 aa13.97□□□□□ -0.17
SRGAP1-205ENST00000542841 OTUD7AQ8TE49 926 aaPredicted RBP13.97□□□□□ -0.17
SRGAP1-205ENST00000542841 HMX1Q9NP08 348 aaPredicted RBP13.97□□□□□ -0.17
SRGAP1-205ENST00000542841 ECHDC1Q9NTX5 307 aa13.97□□□□□ -0.17
SRGAP1-205ENST00000542841 AKAP2Q9Y2D5 859 aa13.97□□□□□ -0.17
SRGAP1-205ENST00000542841 FPGT-TNNI3KV9GXZ4 949 aa13.97□□□□□ -0.17
SRGAP1-205ENST00000542841 SALL1Q9NSC2 1324 aa13.96□□□□□ -0.17
SRGAP1-205ENST00000542841 MYH13Q9UKX3 1938 aa13.96□□□□□ -0.17
SRGAP1-205ENST00000542841 CDC45O75419 566 aa13.96□□□□□ -0.17
SRGAP1-205ENST00000542841 GSPT1P15170 499 aaKnown RBP13.96□□□□□ -0.17
SRGAP1-205ENST00000542841 SYN1P17600 705 aa13.96□□□□□ -0.17
SRGAP1-205ENST00000542841 TFCP2Q12800 502 aa13.96□□□□□ -0.17
SRGAP1-205ENST00000542841 TDHQ8IZJ6 230 aa13.96□□□□□ -0.17
SRGAP1-205ENST00000542841 EAF2Q96CJ1 260 aaPredicted RBP13.96□□□□□ -0.17
SRGAP1-205ENST00000542841 C11orf49Q9H6J7 331 aa13.96□□□□□ -0.17
SRGAP1-205ENST00000542841 CEP126Q9P2H0 1117 aa13.96□□□□□ -0.17
SRGAP1-205ENST00000542841 DENND2AQ9ULE3 1009 aa13.96□□□□□ -0.17
SRGAP1-205ENST00000542841 DDTLA6NHG4 134 aaPredicted RBP13.95□□□□□ -0.18
SRGAP1-205ENST00000542841 SEMA3EO15041 775 aa13.95□□□□□ -0.18
SRGAP1-205ENST00000542841 MAGEA10P43363 369 aaPredicted RBP13.95□□□□□ -0.18
SRGAP1-205ENST00000542841 GCLCP48506 637 aaPredicted RBP13.95□□□□□ -0.18
SRGAP1-205ENST00000542841 TREML2Q5T2D2 321 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms