RNA–Protein interactions for RNA: ENST00000542830.5

LTBR-210, Transcript of lymphotoxin beta receptor, humanhuman

TSL 4

Gene LTBR, Length 539 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-210ENST00000542830 A0A0G2JLL6 359 aaPredicted RBP21.21■□□□□ 0.99
LTBR-210ENST00000542830 FAM196BA6NMK8 535 aa21.21■□□□□ 0.99
LTBR-210ENST00000542830 PDHXO00330 501 aa21.21■□□□□ 0.99
LTBR-210ENST00000542830 DYNLL1P63167 89 aaKnown RBP21.21■□□□□ 0.99
LTBR-210ENST00000542830 MOGSQ13724 837 aa21.21■□□□□ 0.99
LTBR-210ENST00000542830 PRRT2Q7Z6L0 340 aaPredicted RBP21.21■□□□□ 0.99
LTBR-210ENST00000542830 HLA-DOAP06340 250 aa21.2■□□□□ 0.98
LTBR-210ENST00000542830 KIF22Q14807 665 aa21.2■□□□□ 0.98
LTBR-210ENST00000542830 METTL16Q86W50 562 aaKnown RBP21.2■□□□□ 0.98
LTBR-210ENST00000542830 FOXP4Q8IVH2 680 aaPredicted RBP21.2■□□□□ 0.98
LTBR-210ENST00000542830 MIGA1Q8NAN2 632 aa21.2■□□□□ 0.98
LTBR-210ENST00000542830 PARK7Q99497 189 aaKnown RBP21.2■□□□□ 0.98
LTBR-210ENST00000542830 DNAJC2Q99543 621 aaKnown RBP21.2■□□□□ 0.98
LTBR-210ENST00000542830 TRIM34Q9BYJ4 488 aa21.2■□□□□ 0.98
LTBR-210ENST00000542830 BCL11AQ9H165 835 aa21.2■□□□□ 0.98
LTBR-210ENST00000542830 ATP5JP18859 108 aa21.19■□□□□ 0.98
LTBR-210ENST00000542830 CAP2P40123 477 aa21.19■□□□□ 0.98
LTBR-210ENST00000542830 USP5P45974 858 aa21.19■□□□□ 0.98
LTBR-210ENST00000542830 CRACR2BQ8N4Y2 399 aaPredicted RBP21.19■□□□□ 0.98
LTBR-210ENST00000542830 PTPN22Q9Y2R2 807 aa21.19■□□□□ 0.98
LTBR-210ENST00000542830 FOCADQ5VW36 1801 aa21.19■□□□□ 0.98
LTBR-210ENST00000542830 TRIM75PA6NK02 468 aa21.18■□□□□ 0.98
LTBR-210ENST00000542830 GOLIM4O00461 696 aa21.18■□□□□ 0.98
LTBR-210ENST00000542830 MLLT1Q03111 559 aaPredicted RBP21.18■□□□□ 0.98
LTBR-210ENST00000542830 SLC9C2Q5TAH2 1124 aa21.18■□□□□ 0.98
LTBR-210ENST00000542830 GPAT2Q6NUI2 795 aa21.18■□□□□ 0.98
LTBR-210ENST00000542830 C17orf99Q6UX52 265 aa21.18■□□□□ 0.98
LTBR-210ENST00000542830 PALD1Q9ULE6 856 aa21.18■□□□□ 0.98
LTBR-210ENST00000542830 SLC45A1Q9Y2W3 748 aa21.18■□□□□ 0.98
LTBR-210ENST00000542830 PDE6AP16499 860 aa21.17■□□□□ 0.98
LTBR-210ENST00000542830 RRP1P56182 461 aaKnown RBP21.17■□□□□ 0.98
LTBR-210ENST00000542830 LACTBP83111 547 aaPredicted RBP21.17■□□□□ 0.98
LTBR-210ENST00000542830 GADL1Q6ZQY3 521 aa21.17■□□□□ 0.98
LTBR-210ENST00000542830 GINM1Q9NU53 330 aa21.17■□□□□ 0.98
LTBR-210ENST00000542830 CDK5RAP2Q96SN8 1893 aa21.17■□□□□ 0.98
LTBR-210ENST00000542830 ADGRA2Q96PE1 1338 aa21.16■□□□□ 0.98
LTBR-210ENST00000542830 MAGEB6P1A0A0J9YX57 407 aa21.16■□□□□ 0.98
LTBR-210ENST00000542830 USP17L5A8MUK1 530 aa21.16■□□□□ 0.98
LTBR-210ENST00000542830 GNRH1P01148 92 aa21.16■□□□□ 0.98
LTBR-210ENST00000542830 ASNSP08243 561 aa21.16■□□□□ 0.98
LTBR-210ENST00000542830 SOX10P56693 466 aa21.16■□□□□ 0.98
LTBR-210ENST00000542830 ZNF280CQ8ND82 737 aa21.16■□□□□ 0.98
LTBR-210ENST00000542830 RIOK1Q9BRS2 568 aaKnown RBP21.16■□□□□ 0.98
LTBR-210ENST00000542830 BOLA2Q9H3K6 86 aa21.16■□□□□ 0.98
LTBR-210ENST00000542830 DCTPP1Q9H773 170 aa21.16■□□□□ 0.98
LTBR-210ENST00000542830 AS3MTQ9HBK9 375 aa21.16■□□□□ 0.98
LTBR-210ENST00000542830 PAG1Q9NWQ8 432 aa21.16■□□□□ 0.98
LTBR-210ENST00000542830 SAP30BPQ9UHR5 308 aaKnown RBP21.16■□□□□ 0.98
LTBR-210ENST00000542830 HAUS7Q99871 368 aa21.15■□□□□ 0.98
LTBR-210ENST00000542830 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.15■□□□□ 0.98
LTBR-210ENST00000542830 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.15■□□□□ 0.98
LTBR-210ENST00000542830 CPA4Q9UI42 421 aa21.15■□□□□ 0.98
LTBR-210ENST00000542830 PHIPQ8WWQ0 1821 aa21.15■□□□□ 0.98
LTBR-210ENST00000542830 ZNF532Q9HCE3 1301 aa21.14■□□□□ 0.97
LTBR-210ENST00000542830 SIPA1L1O43166 1804 aa21.14■□□□□ 0.97
LTBR-210ENST00000542830 CAP1Q01518 475 aa21.14■□□□□ 0.97
LTBR-210ENST00000542830 SPP2Q13103 211 aa21.14■□□□□ 0.97
LTBR-210ENST00000542830 RRP1BQ14684 758 aaKnown RBP21.14■□□□□ 0.97
LTBR-210ENST00000542830 TTC6Q86TZ1 520 aa21.14■□□□□ 0.97
LTBR-210ENST00000542830 CCDC84Q86UT8 332 aaPredicted RBP21.14■□□□□ 0.97
LTBR-210ENST00000542830 PROCA1Q8NCQ7 364 aaPredicted RBP21.14■□□□□ 0.97
LTBR-210ENST00000542830 CRNKL1Q9BZJ0 848 aaKnown RBP21.14■□□□□ 0.97
LTBR-210ENST00000542830 DNAJC18Q9H819 358 aa21.14■□□□□ 0.97
LTBR-210ENST00000542830 AGTPBP1Q9UPW5 1226 aa21.14■□□□□ 0.97
LTBR-210ENST00000542830 PTPRFP10586 1907 aa21.14■□□□□ 0.97
LTBR-210ENST00000542830 SMARCA5O60264 1052 aaPredicted RBP21.13■□□□□ 0.97
LTBR-210ENST00000542830 PRMT2P55345 433 aa21.13■□□□□ 0.97
LTBR-210ENST00000542830 GPATCH3Q96I76 525 aa21.13■□□□□ 0.97
LTBR-210ENST00000542830 YTHDC1Q96MU7 727 aaKnown RBP21.13■□□□□ 0.97
LTBR-210ENST00000542830 EHD4Q9H223 541 aa21.13■□□□□ 0.97
LTBR-210ENST00000542830 PNMA3Q9UL41 463 aa21.13■□□□□ 0.97
LTBR-210ENST00000542830 ATAD5Q96QE3 1844 aa21.13■□□□□ 0.97
LTBR-210ENST00000542830 TCRBV5S4A2TA0A5A2 114 aa21.12■□□□□ 0.97
LTBR-210ENST00000542830 CYP2C8P10632 490 aa21.12■□□□□ 0.97
LTBR-210ENST00000542830 PABPC4Q13310 644 aaKnown RBP eCLIP21.12■□□□□ 0.97
LTBR-210ENST00000542830 EDC3Q96F86 508 aaKnown RBP21.12■□□□□ 0.97
LTBR-210ENST00000542830 WDR18Q9BV38 432 aa21.12■□□□□ 0.97
LTBR-210ENST00000542830 ECHDC1Q9NTX5 307 aa21.12■□□□□ 0.97
LTBR-210ENST00000542830 SERPINB13Q9UIV8 391 aa21.12■□□□□ 0.97
LTBR-210ENST00000542830 MYH1P12882 1939 aa21.12■□□□□ 0.97
LTBR-210ENST00000542830 BCRP11274 1271 aa21.11■□□□□ 0.97
LTBR-210ENST00000542830 HOXD10P28358 340 aa21.11■□□□□ 0.97
LTBR-210ENST00000542830 ADD2P35612 726 aa21.11■□□□□ 0.97
LTBR-210ENST00000542830 SH3D19Q5HYK7 790 aa21.11■□□□□ 0.97
LTBR-210ENST00000542830 SMCR8Q8TEV9 937 aaPredicted RBP21.11■□□□□ 0.97
LTBR-210ENST00000542830 ARMC5Q96C12 935 aa21.11■□□□□ 0.97
LTBR-210ENST00000542830 ARHGAP39Q9C0H5 1083 aa21.11■□□□□ 0.97
LTBR-210ENST00000542830 POLR3DP05423 398 aaPredicted RBP21.1■□□□□ 0.97
LTBR-210ENST00000542830 PSMC4P43686 418 aa21.1■□□□□ 0.97
LTBR-210ENST00000542830 SLC4A8Q2Y0W8 1093 aa21.1■□□□□ 0.97
LTBR-210ENST00000542830 ZSCAN25Q6NSZ9 544 aa21.1■□□□□ 0.97
LTBR-210ENST00000542830 NBPF11Q86T75 865 aa21.1■□□□□ 0.97
LTBR-210ENST00000542830 ZBTB21Q9ULJ3 1066 aa21.1■□□□□ 0.97
LTBR-210ENST00000542830 PCDHB15Q9Y5E8 787 aa21.1■□□□□ 0.97
LTBR-210ENST00000542830 PTCH2Q9Y6C5 1203 aa21.1■□□□□ 0.97
LTBR-210ENST00000542830 GDF11O95390 407 aa21.09■□□□□ 0.97
LTBR-210ENST00000542830 HMGCS2P54868 508 aa21.09■□□□□ 0.97
LTBR-210ENST00000542830 TATDN1Q6P1N9 297 aa21.09■□□□□ 0.97
LTBR-210ENST00000542830 C19orf81C9J6K1 198 aa21.08■□□□□ 0.97
LTBR-210ENST00000542830 FMNL1O95466 1100 aaPredicted RBP21.08■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms