RNA–Protein interactions for RNA: ENST00000542700.6

CHMP4A-209, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 3

Gene CHMP4A, Length 847 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-209ENST00000542700 GJD3Q8N144 294 aa9.95□□□□□ -0.82
CHMP4A-209ENST00000542700 PRSS33Q8NF86 280 aa9.95□□□□□ -0.82
CHMP4A-209ENST00000542700 HLA-CQ95604 372 aa9.95□□□□□ -0.82
CHMP4A-209ENST00000542700 TEKT1Q969V4 418 aa9.95□□□□□ -0.82
CHMP4A-209ENST00000542700 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.95□□□□□ -0.82
CHMP4A-209ENST00000542700 DBF4Q9UBU7 674 aaPredicted RBP9.95□□□□□ -0.82
CHMP4A-209ENST00000542700 YBX2Q9Y2T7 364 aaKnown RBP9.95□□□□□ -0.82
CHMP4A-209ENST00000542700 MYBBP1AQ9BQG0 1328 aaKnown RBP9.95□□□□□ -0.82
CHMP4A-209ENST00000542700 KIAA0355O15063 1070 aa9.94□□□□□ -0.82
CHMP4A-209ENST00000542700 ITGA6P23229 1130 aa9.94□□□□□ -0.82
CHMP4A-209ENST00000542700 ADCYAP1R1P41586 468 aa9.94□□□□□ -0.82
CHMP4A-209ENST00000542700 MFSD14CQ5VZR4 134 aa9.94□□□□□ -0.82
CHMP4A-209ENST00000542700 HFE2Q6ZVN8 426 aa9.94□□□□□ -0.82
CHMP4A-209ENST00000542700 COL26A1Q96A83 441 aa9.94□□□□□ -0.82
CHMP4A-209ENST00000542700 PRRC2BQ5JSZ5 2229 aaKnown RBP9.94□□□□□ -0.82
CHMP4A-209ENST00000542700 MYH3P11055 1940 aa9.94□□□□□ -0.82
CHMP4A-209ENST00000542700 A0A0G2JMZ2 1700 aa9.93□□□□□ -0.82
CHMP4A-209ENST00000542700 GTPBP6O43824 516 aaPredicted RBP9.93□□□□□ -0.82
CHMP4A-209ENST00000542700 PQBP1O60828 265 aaKnown RBP9.93□□□□□ -0.82
CHMP4A-209ENST00000542700 PTPN5P54829 565 aa9.93□□□□□ -0.82
CHMP4A-209ENST00000542700 NFE2L2Q16236 605 aa9.93□□□□□ -0.82
CHMP4A-209ENST00000542700 ANO1Q5XXA6 986 aa9.93□□□□□ -0.82
CHMP4A-209ENST00000542700 PPP2R2DQ66LE6 453 aa9.93□□□□□ -0.82
CHMP4A-209ENST00000542700 ARRDC4Q8NCT1 418 aa9.93□□□□□ -0.82
CHMP4A-209ENST00000542700 FAM151AQ8WW52 585 aa9.93□□□□□ -0.82
CHMP4A-209ENST00000542700 USP6NLQ92738 828 aa9.93□□□□□ -0.82
CHMP4A-209ENST00000542700 ASCC2Q9H1I8 757 aaPredicted RBP9.93□□□□□ -0.82
CHMP4A-209ENST00000542700 TMEM39AQ9NV64 488 aa9.93□□□□□ -0.82
CHMP4A-209ENST00000542700 FAM86C1Q9NVL1 165 aa9.93□□□□□ -0.82
CHMP4A-209ENST00000542700 HYPKQ9NX55 129 aa9.93□□□□□ -0.82
CHMP4A-209ENST00000542700 MORF4L1Q9UBU8 362 aa9.93□□□□□ -0.82
CHMP4A-209ENST00000542700 MTCH2Q9Y6C9 303 aa9.93□□□□□ -0.82
CHMP4A-209ENST00000542700 USP34Q70CQ2 3546 aa9.93□□□□□ -0.82
CHMP4A-209ENST00000542700 CHD7Q9P2D1 2997 aa9.92□□□□□ -0.82
CHMP4A-209ENST00000542700 UTYO14607 1347 aa9.92□□□□□ -0.82
CHMP4A-209ENST00000542700 RFXAPO00287 272 aa9.92□□□□□ -0.82
CHMP4A-209ENST00000542700 DCXO43602 365 aa9.92□□□□□ -0.82
CHMP4A-209ENST00000542700 TMEM240Q5SV17 173 aa9.92□□□□□ -0.82
CHMP4A-209ENST00000542700 RASIP1Q5U651 963 aa9.92□□□□□ -0.82
CHMP4A-209ENST00000542700 C1orf53Q5VUE5 145 aa9.92□□□□□ -0.82
CHMP4A-209ENST00000542700 KRT40Q6A162 431 aa9.92□□□□□ -0.82
CHMP4A-209ENST00000542700 APOBEC3HQ6NTF7 200 aaKnown RBP9.92□□□□□ -0.82
CHMP4A-209ENST00000542700 CCAR1Q8IX12 1150 aaKnown RBP9.92□□□□□ -0.82
CHMP4A-209ENST00000542700 ZDHHC15Q96MV8 337 aa9.92□□□□□ -0.82
CHMP4A-209ENST00000542700 FLRT1Q9NZU1 646 aa9.92□□□□□ -0.82
CHMP4A-209ENST00000542700 PHIPQ8WWQ0 1821 aa9.91□□□□□ -0.82
CHMP4A-209ENST00000542700 C5orf42Q9H799 3197 aa9.91□□□□□ -0.82
CHMP4A-209ENST00000542700 PHF20L1A8MW92 1017 aa9.91□□□□□ -0.82
CHMP4A-209ENST00000542700 PER1O15534 1290 aaPredicted RBP9.91□□□□□ -0.82
CHMP4A-209ENST00000542700 MAPK4P31152 587 aa9.91□□□□□ -0.82
CHMP4A-209ENST00000542700 HDLBPQ00341 1268 aaKnown RBP9.91□□□□□ -0.82
CHMP4A-209ENST00000542700 CHAF1AQ13111 956 aaPredicted RBP9.91□□□□□ -0.82
CHMP4A-209ENST00000542700 MORN1Q5T089 497 aa9.91□□□□□ -0.82
CHMP4A-209ENST00000542700 CCDC174Q6PII3 467 aa9.91□□□□□ -0.82
CHMP4A-209ENST00000542700 C16orf59Q7L2K0 433 aa9.91□□□□□ -0.82
CHMP4A-209ENST00000542700 GPR142Q7Z601 462 aa9.91□□□□□ -0.82
CHMP4A-209ENST00000542700 FAM178BQ8IXR5 827 aa9.91□□□□□ -0.82
CHMP4A-209ENST00000542700 PROCA1Q8NCQ7 364 aaPredicted RBP9.91□□□□□ -0.82
CHMP4A-209ENST00000542700 TDRD7Q8NHU6 1098 aaKnown RBP9.91□□□□□ -0.82
CHMP4A-209ENST00000542700 A0A1B0GUL6 1792 aa9.91□□□□□ -0.82
CHMP4A-209ENST00000542700 ACRP10323 421 aa9.9□□□□□ -0.82
CHMP4A-209ENST00000542700 CYP2C19P33261 490 aa9.9□□□□□ -0.82
CHMP4A-209ENST00000542700 GYG1P46976 350 aa9.9□□□□□ -0.82
CHMP4A-209ENST00000542700 ID4P47928 161 aa9.9□□□□□ -0.82
CHMP4A-209ENST00000542700 NFIAQ12857 509 aa9.9□□□□□ -0.82
CHMP4A-209ENST00000542700 PABPC4Q13310 644 aaKnown RBP eCLIP9.9□□□□□ -0.822e-6■■■□□ 18.3
CHMP4A-209ENST00000542700 SAMD1Q6SPF0 538 aaPredicted RBP9.9□□□□□ -0.82
CHMP4A-209ENST00000542700 SLC44A5Q8NCS7 719 aa9.9□□□□□ -0.82
CHMP4A-209ENST00000542700 TRPV1Q8NER1 839 aa9.9□□□□□ -0.82
CHMP4A-209ENST00000542700 GPRC5AQ8NFJ5 357 aa9.9□□□□□ -0.82
CHMP4A-209ENST00000542700 MFSD14AQ96MC6 490 aa9.9□□□□□ -0.82
CHMP4A-209ENST00000542700 PORCNQ9H237 461 aa9.9□□□□□ -0.82
CHMP4A-209ENST00000542700 PHAXQ9H814 394 aaKnown RBP9.9□□□□□ -0.82
CHMP4A-209ENST00000542700 CWC22Q9HCG8 908 aaKnown RBP9.9□□□□□ -0.82
CHMP4A-209ENST00000542700 TXNRD2Q9NNW7 524 aa9.9□□□□□ -0.82
CHMP4A-209ENST00000542700 SPINK5Q9NQ38 1064 aaPredicted RBP9.9□□□□□ -0.82
CHMP4A-209ENST00000542700 LOC285556D6RIA3 1793 aa9.9□□□□□ -0.82
CHMP4A-209ENST00000542700 DOCK1Q14185 1865 aa9.89□□□□□ -0.83
CHMP4A-209ENST00000542700 GBF1Q92538 1859 aa9.89□□□□□ -0.83
CHMP4A-209ENST00000542700 EPG5Q9HCE0 2579 aa9.89□□□□□ -0.83
CHMP4A-209ENST00000542700 APBB1O00213 710 aa9.89□□□□□ -0.83
CHMP4A-209ENST00000542700 PLIN1O60240 522 aa9.89□□□□□ -0.83
CHMP4A-209ENST00000542700 MYOGP15173 224 aa9.89□□□□□ -0.83
CHMP4A-209ENST00000542700 RABGGTBP53611 331 aa9.89□□□□□ -0.83
CHMP4A-209ENST00000542700 HMGCS2P54868 508 aa9.89□□□□□ -0.83
CHMP4A-209ENST00000542700 IRX3P78415 501 aaPredicted RBP9.89□□□□□ -0.83
CHMP4A-209ENST00000542700 MAP2K5Q13163 448 aa9.89□□□□□ -0.83
CHMP4A-209ENST00000542700 PPIGQ13427 754 aaKnown RBP eCLIP9.89□□□□□ -0.836e-8■■□□□ 12.9
CHMP4A-209ENST00000542700 KCTD2Q14681 263 aa9.89□□□□□ -0.83
CHMP4A-209ENST00000542700 IER5LQ5T953 404 aa9.89□□□□□ -0.83
CHMP4A-209ENST00000542700 ZNF365Q70YC5 407 aa9.89□□□□□ -0.83
CHMP4A-209ENST00000542700 PLEKHH3Q7Z736 793 aa9.89□□□□□ -0.83
CHMP4A-209ENST00000542700 BABAM1Q9NWV8 329 aa9.89□□□□□ -0.83
CHMP4A-209ENST00000542700 IQSEC3Q9UPP2 1182 aaPredicted RBP9.89□□□□□ -0.83
CHMP4A-209ENST00000542700 LRRFIP2Q9Y608 721 aaKnown RBP9.89□□□□□ -0.83
CHMP4A-209ENST00000542700 NDUFB9Q9Y6M9 179 aa9.89□□□□□ -0.83
CHMP4A-209ENST00000542700 ZFHX2Q9C0A1 2572 aaPredicted RBP9.89□□□□□ -0.83
CHMP4A-209ENST00000542700 ATRNL1Q5VV63 1379 aa9.88□□□□□ -0.83
CHMP4A-209ENST00000542700 PTPRZ1P23471 2315 aaPredicted RBP9.88□□□□□ -0.83
CHMP4A-209ENST00000542700 MED19A0JLT2 244 aaPredicted RBP9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms