RNA–Protein interactions for RNA: ENST00000542694.2

SPTB-205, Transcript of spectrin beta, erythrocytic, humanhuman

TSL 1 (best)

Gene SPTB, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTB-205ENST00000542694 TBC1D2Q9BYX2 928 aa18.72■□□□□ 0.59
SPTB-205ENST00000542694 POLR3DP05423 398 aaPredicted RBP18.71■□□□□ 0.59
SPTB-205ENST00000542694 CETPP11597 493 aa18.71■□□□□ 0.59
SPTB-205ENST00000542694 INPP5BP32019 993 aa18.71■□□□□ 0.59
SPTB-205ENST00000542694 SNAPC2Q13487 334 aa18.71■□□□□ 0.59
SPTB-205ENST00000542694 TSHZ3Q63HK5 1081 aa18.71■□□□□ 0.59
SPTB-205ENST00000542694 METTL16Q86W50 562 aaKnown RBP18.71■□□□□ 0.59
SPTB-205ENST00000542694 APPBP2Q92624 585 aa18.71■□□□□ 0.59
SPTB-205ENST00000542694 OTUD5Q96G74 571 aa18.71■□□□□ 0.59
SPTB-205ENST00000542694 RNF186Q9NXI6 227 aa18.71■□□□□ 0.59
SPTB-205ENST00000542694 SNCAIPQ9Y6H5 919 aa18.71■□□□□ 0.59
SPTB-205ENST00000542694 SALL3Q9BXA9 1300 aa18.71■□□□□ 0.59
SPTB-205ENST00000542694 TESPA1A2RU30 521 aaPredicted RBP18.7■□□□□ 0.58
SPTB-205ENST00000542694 CENPBP07199 599 aaPredicted RBP18.7■□□□□ 0.58
SPTB-205ENST00000542694 GNAT2P19087 354 aa18.7■□□□□ 0.58
SPTB-205ENST00000542694 OTUD7AQ8TE49 926 aaPredicted RBP18.7■□□□□ 0.58
SPTB-205ENST00000542694 FSD1Q9BTV5 496 aa18.7■□□□□ 0.58
SPTB-205ENST00000542694 PALD1Q9ULE6 856 aa18.7■□□□□ 0.58
SPTB-205ENST00000542694 CXCL11O14625 94 aa18.69■□□□□ 0.58
SPTB-205ENST00000542694 TRPA1O75762 1119 aa18.69■□□□□ 0.58
SPTB-205ENST00000542694 MBD4O95243 580 aa18.69■□□□□ 0.58
SPTB-205ENST00000542694 HSPA8P11142 646 aaKnown RBP18.69■□□□□ 0.58
SPTB-205ENST00000542694 EHD4Q9H223 541 aa18.69■□□□□ 0.58
SPTB-205ENST00000542694 OSBPL3Q9H4L5 887 aa18.69■□□□□ 0.58
SPTB-205ENST00000542694 MCM9Q9NXL9 1143 aa18.69■□□□□ 0.58
SPTB-205ENST00000542694 SAP30BPQ9UHR5 308 aaKnown RBP18.69■□□□□ 0.58
SPTB-205ENST00000542694 SERPINB13Q9UIV8 391 aa18.69■□□□□ 0.58
SPTB-205ENST00000542694 MYH7P12883 1935 aa18.68■□□□□ 0.58
SPTB-205ENST00000542694 NEFLP07196 543 aa18.68■□□□□ 0.58
SPTB-205ENST00000542694 LBX1P52954 281 aa18.68■□□□□ 0.58
SPTB-205ENST00000542694 GIMAP6Q6P9H5 292 aa18.68■□□□□ 0.58
SPTB-205ENST00000542694 IFNL1Q8IU54 200 aa18.68■□□□□ 0.58
SPTB-205ENST00000542694 ARMT1Q9H993 441 aa18.68■□□□□ 0.58
SPTB-205ENST00000542694 ZCCHC17Q9NP64 241 aaKnown RBP18.68■□□□□ 0.58
SPTB-205ENST00000542694 ASNSP08243 561 aa18.67■□□□□ 0.58
SPTB-205ENST00000542694 PTPRAP18433 802 aa18.67■□□□□ 0.58
SPTB-205ENST00000542694 GJA5P36382 358 aa18.67■□□□□ 0.58
SPTB-205ENST00000542694 CAP2P40123 477 aa18.67■□□□□ 0.58
SPTB-205ENST00000542694 LCORLQ8N3X6 602 aa18.67■□□□□ 0.58
SPTB-205ENST00000542694 MS4A4AQ96JQ5 239 aa18.67■□□□□ 0.58
SPTB-205ENST00000542694 CFHR5Q9BXR6 569 aa18.67■□□□□ 0.58
SPTB-205ENST00000542694 DCP1AQ9NPI6 582 aaPredicted RBP18.67■□□□□ 0.58
SPTB-205ENST00000542694 SLC4A4Q9Y6R1 1079 aa18.67■□□□□ 0.58
SPTB-205ENST00000542694 FOCADQ5VW36 1801 aa18.66■□□□□ 0.58
SPTB-205ENST00000542694 CCL15-CCL14A0A0B4J2E2 113 aa18.66■□□□□ 0.58
SPTB-205ENST00000542694 IRF6O14896 467 aa18.66■□□□□ 0.58
SPTB-205ENST00000542694 CCL15Q16663 113 aa18.66■□□□□ 0.58
SPTB-205ENST00000542694 NOM1Q5C9Z4 860 aaKnown RBP18.66■□□□□ 0.58
SPTB-205ENST00000542694 FASTKD5Q7L8L6 764 aaKnown RBP18.66■□□□□ 0.58
SPTB-205ENST00000542694 PLEKHM2Q8IWE5 1019 aa18.66■□□□□ 0.58
SPTB-205ENST00000542694 STRBPQ96SI9 672 aaKnown RBP18.66■□□□□ 0.58
SPTB-205ENST00000542694 PUS7LQ9H0K6 701 aaKnown RBP18.66■□□□□ 0.58
SPTB-205ENST00000542694 AS3MTQ9HBK9 375 aa18.66■□□□□ 0.58
SPTB-205ENST00000542694 KCNH4Q9UQ05 1017 aa18.66■□□□□ 0.58
SPTB-205ENST00000542694 ZHX2Q9Y6X8 837 aa18.66■□□□□ 0.58
SPTB-205ENST00000542694 MYH1P12882 1939 aa18.66■□□□□ 0.58
SPTB-205ENST00000542694 TRIM6-TRIM34B2RNG4 842 aa18.65■□□□□ 0.58
SPTB-205ENST00000542694 NACAP1Q9BZK3 213 aa18.65■□□□□ 0.58
SPTB-205ENST00000542694 OTOFQ9HC10 1997 aa18.64■□□□□ 0.58
SPTB-205ENST00000542694 USP17L5A8MUK1 530 aa18.64■□□□□ 0.57
SPTB-205ENST00000542694 SDR42E1Q8WUS8 393 aa18.64■□□□□ 0.57
SPTB-205ENST00000542694 CNKSR2Q8WXI2 1034 aa18.64■□□□□ 0.57
SPTB-205ENST00000542694 OSBP2Q969R2 916 aa18.64■□□□□ 0.57
SPTB-205ENST00000542694 CABP5Q9NP86 173 aa18.64■□□□□ 0.57
SPTB-205ENST00000542694 SWAP70Q9UH65 585 aa18.64■□□□□ 0.57
SPTB-205ENST00000542694 CDK5RAP2Q96SN8 1893 aa18.64■□□□□ 0.57
SPTB-205ENST00000542694 HIP1O00291 1037 aa18.63■□□□□ 0.57
SPTB-205ENST00000542694 ZMYM1Q5SVZ6 1142 aa18.63■□□□□ 0.57
SPTB-205ENST00000542694 TATDN1Q6P1N9 297 aa18.63■□□□□ 0.57
SPTB-205ENST00000542694 BRI3BPQ8WY22 251 aa18.63■□□□□ 0.57
SPTB-205ENST00000542694 RILPL2Q969X0 211 aa18.63■□□□□ 0.57
SPTB-205ENST00000542694 ZFYVE28Q9HCC9 887 aa18.63■□□□□ 0.57
SPTB-205ENST00000542694 HELLSQ9NRZ9 838 aa18.63■□□□□ 0.57
SPTB-205ENST00000542694 AFG3L2Q9Y4W6 797 aa18.63■□□□□ 0.57
SPTB-205ENST00000542694 FAM196BA6NMK8 535 aa18.62■□□□□ 0.57
SPTB-205ENST00000542694 PATL2C9JE40 543 aaKnown RBP18.62■□□□□ 0.57
SPTB-205ENST00000542694 GPAA1O43292 621 aa18.62■□□□□ 0.57
SPTB-205ENST00000542694 APPP05067 770 aa18.62■□□□□ 0.57
SPTB-205ENST00000542694 SLFNL1Q499Z3 407 aa18.62■□□□□ 0.57
SPTB-205ENST00000542694 CERKLQ49MI3 558 aaPredicted RBP18.62■□□□□ 0.57
SPTB-205ENST00000542694 ZNF287Q9HBT7 754 aa18.62■□□□□ 0.57
SPTB-205ENST00000542694 ARPP21Q9UBL0 812 aaPredicted RBP18.62■□□□□ 0.57
SPTB-205ENST00000542694 IGF2BP3O00425 579 aaKnown RBP eCLIP18.61■□□□□ 0.57
SPTB-205ENST00000542694 PRKAB2O43741 272 aa18.61■□□□□ 0.57
SPTB-205ENST00000542694 TBC1D8O95759 1140 aa18.61■□□□□ 0.57
SPTB-205ENST00000542694 PLCD1P51178 756 aa18.61■□□□□ 0.57
SPTB-205ENST00000542694 MFAP1P55081 439 aaKnown RBP18.61■□□□□ 0.57
SPTB-205ENST00000542694 SBK1Q52WX2 424 aa18.61■□□□□ 0.57
SPTB-205ENST00000542694 C12orf60Q5U649 245 aa18.61■□□□□ 0.57
SPTB-205ENST00000542694 ANKRD23Q86SG2 305 aa18.61■□□□□ 0.57
SPTB-205ENST00000542694 ZNF280CQ8ND82 737 aa18.61■□□□□ 0.57
SPTB-205ENST00000542694 PTPN18Q99952 460 aa18.61■□□□□ 0.57
SPTB-205ENST00000542694 WDR18Q9BV38 432 aa18.61■□□□□ 0.57
SPTB-205ENST00000542694 TSKSQ9UJT2 592 aa18.61■□□□□ 0.57
SPTB-205ENST00000542694 C19orf81C9J6K1 198 aa18.6■□□□□ 0.57
SPTB-205ENST00000542694 USP17L12C9JPN9 530 aa18.6■□□□□ 0.57
SPTB-205ENST00000542694 USP17L21D6R901 530 aa18.6■□□□□ 0.57
SPTB-205ENST00000542694 ARHGEF6Q15052 776 aa18.6■□□□□ 0.57
SPTB-205ENST00000542694 TAF1CQ15572 869 aaPredicted RBP18.6■□□□□ 0.57
SPTB-205ENST00000542694 CENPQQ7L2Z9 268 aaPredicted RBP18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms