RNA–Protein interactions for RNA: ENST00000542355.6

SCG3-202, Transcript of secretogranin III, humanhuman

TSL 2 BASIC

Gene SCG3, Length 2,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3-202ENST00000542355 GRIPAP1Q4V328 841 aa12.93□□□□□ -0.34
SCG3-202ENST00000542355 STRIP1Q5VSL9 837 aa12.93□□□□□ -0.34
SCG3-202ENST00000542355 FOXD4L3Q6VB84 417 aaPredicted RBP12.93□□□□□ -0.34
SCG3-202ENST00000542355 NSUN7Q8NE18 718 aaKnown RBP12.93□□□□□ -0.34
SCG3-202ENST00000542355 SNED1Q8TER0 1413 aa12.92□□□□□ -0.34
SCG3-202ENST00000542355 ERICH2A1L162 156 aa12.92□□□□□ -0.34
SCG3-202ENST00000542355 VPS37CA5D8V6 355 aaPredicted RBP12.92□□□□□ -0.34
SCG3-202ENST00000542355 POLR3DP05423 398 aaPredicted RBP12.92□□□□□ -0.34
SCG3-202ENST00000542355 FGRP09769 529 aa12.92□□□□□ -0.34
SCG3-202ENST00000542355 LIFRP42702 1097 aa12.92□□□□□ -0.34
SCG3-202ENST00000542355 DACT2Q5SW24 774 aa12.92□□□□□ -0.34
SCG3-202ENST00000542355 C12orf60Q5U649 245 aa12.92□□□□□ -0.34
SCG3-202ENST00000542355 KIAA0825Q8IV33 1275 aa12.92□□□□□ -0.34
SCG3-202ENST00000542355 FAM184AQ8NB25 1140 aa12.92□□□□□ -0.34
SCG3-202ENST00000542355 SMARCC2Q8TAQ2 1214 aa12.92□□□□□ -0.34
SCG3-202ENST00000542355 UBAC1Q9BSL1 405 aa12.92□□□□□ -0.34
SCG3-202ENST00000542355 SAP30BPQ9UHR5 308 aaKnown RBP12.92□□□□□ -0.34
SCG3-202ENST00000542355 MTMR6Q9Y217 621 aa12.92□□□□□ -0.34
SCG3-202ENST00000542355 PTPDC1A2A3K4 754 aa12.91□□□□□ -0.34
SCG3-202ENST00000542355 USP17L3A6NCW0 530 aa12.91□□□□□ -0.34
SCG3-202ENST00000542355 USP17L4A6NCW7 530 aa12.91□□□□□ -0.34
SCG3-202ENST00000542355 CCDC69A6NI79 296 aa12.91□□□□□ -0.34
SCG3-202ENST00000542355 GOLGA6L22H0YM25 854 aa12.91□□□□□ -0.34
SCG3-202ENST00000542355 PCP11498 1178 aaKnown RBP12.91□□□□□ -0.34
SCG3-202ENST00000542355 RXRAP19793 462 aa12.91□□□□□ -0.34
SCG3-202ENST00000542355 PDCP20941 246 aa12.91□□□□□ -0.34
SCG3-202ENST00000542355 WTAPQ15007 396 aa12.91□□□□□ -0.34
SCG3-202ENST00000542355 USP17L1Q7RTZ2 530 aa12.91□□□□□ -0.34
SCG3-202ENST00000542355 SGMS1Q86VZ5 419 aa12.91□□□□□ -0.34
SCG3-202ENST00000542355 AMOTL1Q8IY63 956 aa12.91□□□□□ -0.34
SCG3-202ENST00000542355 CHMP4CQ96CF2 233 aa12.91□□□□□ -0.34
SCG3-202ENST00000542355 SLC12A7Q9Y666 1083 aa12.91□□□□□ -0.34
SCG3-202ENST00000542355 DHX16O60231 1041 aaKnown RBP12.91□□□□□ -0.34
SCG3-202ENST00000542355 METAP2P50579 478 aaKnown RBP eCLIP12.91□□□□□ -0.34
SCG3-202ENST00000542355 PLCD1P51178 756 aa12.91□□□□□ -0.34
SCG3-202ENST00000542355 PDE4BQ07343 736 aa12.91□□□□□ -0.34
SCG3-202ENST00000542355 APOA5Q6Q788 366 aa12.91□□□□□ -0.34
SCG3-202ENST00000542355 MICU3Q86XE3 530 aa12.91□□□□□ -0.34
SCG3-202ENST00000542355 PSMD1Q99460 953 aa12.91□□□□□ -0.34
SCG3-202ENST00000542355 MYL10Q9BUA6 226 aa12.91□□□□□ -0.34
SCG3-202ENST00000542355 ZNF277Q9NRM2 450 aaPredicted RBP12.91□□□□□ -0.34
SCG3-202ENST00000542355 CCDC88AQ3V6T2 1871 aa12.91□□□□□ -0.34
SCG3-202ENST00000542355 MAST2Q6P0Q8 1798 aa12.91□□□□□ -0.34
SCG3-202ENST00000542355 YDJCA8MPS7 323 aa12.9□□□□□ -0.34
SCG3-202ENST00000542355 CPLX1O14810 134 aa12.9□□□□□ -0.34
SCG3-202ENST00000542355 ZBTB43O43298 467 aa12.9□□□□□ -0.34
SCG3-202ENST00000542355 F13A1P00488 732 aa12.9□□□□□ -0.34
SCG3-202ENST00000542355 ADD1P35611 737 aaKnown RBP12.9□□□□□ -0.34
SCG3-202ENST00000542355 HMGN5P82970 282 aaKnown RBP12.9□□□□□ -0.34
SCG3-202ENST00000542355 CCDC144CPQ8IYA2 1237 aa12.9□□□□□ -0.34
SCG3-202ENST00000542355 TEKT1Q969V4 418 aa12.9□□□□□ -0.34
SCG3-202ENST00000542355 DYNLL2Q96FJ2 89 aa12.9□□□□□ -0.34
SCG3-202ENST00000542355 MTA3Q9BTC8 594 aa12.9□□□□□ -0.34
SCG3-202ENST00000542355 TRAIPQ9BWF2 469 aa12.9□□□□□ -0.34
SCG3-202ENST00000542355 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.9□□□□□ -0.34
SCG3-202ENST00000542355 CHD4Q14839 1912 aa12.9□□□□□ -0.34
SCG3-202ENST00000542355 CRKP46108 304 aa12.9□□□□□ -0.34
SCG3-202ENST00000542355 FKBP1AP62942 108 aaKnown RBP12.9□□□□□ -0.34
SCG3-202ENST00000542355 PICALMQ13492 652 aa12.9□□□□□ -0.34
SCG3-202ENST00000542355 DALRD3Q5D0E6 543 aaKnown RBP12.9□□□□□ -0.34
SCG3-202ENST00000542355 FAM47AQ5JRC9 791 aa12.9□□□□□ -0.34
SCG3-202ENST00000542355 HHIPL2Q6UWX4 724 aa12.9□□□□□ -0.34
SCG3-202ENST00000542355 SYNE3Q6ZMZ3 975 aa12.9□□□□□ -0.34
SCG3-202ENST00000542355 IQCA1Q86XH1 822 aa12.9□□□□□ -0.34
SCG3-202ENST00000542355 TMTC2Q8N394 836 aa12.9□□□□□ -0.34
SCG3-202ENST00000542355 LARGE2Q8N3Y3 721 aa12.9□□□□□ -0.34
SCG3-202ENST00000542355 ZSCAN10Q96SZ4 725 aaPredicted RBP12.9□□□□□ -0.34
SCG3-202ENST00000542355 USP40Q9NVE5 1235 aa12.9□□□□□ -0.34
SCG3-202ENST00000542355 TNKSO95271 1327 aa12.9□□□□□ -0.35
SCG3-202ENST00000542355 FLT1P17948 1338 aa12.9□□□□□ -0.35
SCG3-202ENST00000542355 ORC4O43929 436 aa12.89□□□□□ -0.35
SCG3-202ENST00000542355 TRAK2O60296 914 aa12.89□□□□□ -0.35
SCG3-202ENST00000542355 APOBEC3HQ6NTF7 200 aaKnown RBP12.89□□□□□ -0.35
SCG3-202ENST00000542355 CDC37L1Q7L3B6 337 aa12.89□□□□□ -0.35
SCG3-202ENST00000542355 SGIP1Q9BQI5 828 aa12.89□□□□□ -0.35
SCG3-202ENST00000542355 MKNK2Q9HBH9 465 aa12.89□□□□□ -0.35
SCG3-202ENST00000542355 TIAM2Q8IVF5 1701 aa12.89□□□□□ -0.35
SCG3-202ENST00000542355 TSPY2A6NKD2 308 aa12.88□□□□□ -0.35
SCG3-202ENST00000542355 RBM5P52756 815 aaKnown RBP eCLIP12.88□□□□□ -0.35
SCG3-202ENST00000542355 SOGA3Q5TF21 947 aa12.88□□□□□ -0.35
SCG3-202ENST00000542355 GOLGA8AA7E2F4 631 aa12.88□□□□□ -0.35
SCG3-202ENST00000542355 H3BQV1 296 aa12.88□□□□□ -0.35
SCG3-202ENST00000542355 PRPF40AO75400 957 aaKnown RBP12.88□□□□□ -0.35
SCG3-202ENST00000542355 FDPSP14324 419 aaKnown RBP12.88□□□□□ -0.35
SCG3-202ENST00000542355 CDC27P30260 824 aa12.88□□□□□ -0.35
SCG3-202ENST00000542355 FOSBP53539 338 aa12.88□□□□□ -0.35
SCG3-202ENST00000542355 SEC23AQ15436 765 aa12.88□□□□□ -0.35
SCG3-202ENST00000542355 IFFO2Q5TF58 517 aa12.88□□□□□ -0.35
SCG3-202ENST00000542355 CDC42EP5Q6NZY7 148 aa12.88□□□□□ -0.35
SCG3-202ENST00000542355 FERMT3Q86UX7 667 aa12.88□□□□□ -0.35
SCG3-202ENST00000542355 ENAHQ8N8S7 591 aaPredicted RBP12.88□□□□□ -0.35
SCG3-202ENST00000542355 KIF3AQ9Y496 699 aa12.88□□□□□ -0.35
SCG3-202ENST00000542355 PCDHAC2Q9Y5I4 1007 aa12.88□□□□□ -0.35
SCG3-202ENST00000542355 NMT2O60551 498 aa12.87□□□□□ -0.35
SCG3-202ENST00000542355 WDHD1O75717 1129 aaPredicted RBP12.87□□□□□ -0.35
SCG3-202ENST00000542355 RAD17O75943 681 aa12.87□□□□□ -0.35
SCG3-202ENST00000542355 PTGER2P43116 358 aa12.87□□□□□ -0.35
SCG3-202ENST00000542355 TFAP4Q01664 338 aa12.87□□□□□ -0.35
SCG3-202ENST00000542355 IFIT1BQ5T764 474 aaKnown RBP12.87□□□□□ -0.35
SCG3-202ENST00000542355 SLC44A5Q8NCS7 719 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms