RNA–Protein interactions for RNA: ENST00000542128.5

KDM3A-216, Transcript of lysine demethylase 3A, humanhuman

TSL 5 BASIC

Gene KDM3A, Length 4,311 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3A-216ENST00000542128 ABCC3O15438 1527 aa13.98□□□□□ -0.17
KDM3A-216ENST00000542128 AKR1B15C9JRZ8 316 aaPredicted RBP13.98□□□□□ -0.17
KDM3A-216ENST00000542128 CCDC144BQ3MJ40 725 aa13.98□□□□□ -0.17
KDM3A-216ENST00000542128 CCDC144CPQ8IYA2 1237 aa13.98□□□□□ -0.17
KDM3A-216ENST00000542128 KCNG4Q8TDN1 519 aa13.98□□□□□ -0.17
KDM3A-216ENST00000542128 NSRP1Q9H0G5 558 aaKnown RBP13.98□□□□□ -0.17
KDM3A-216ENST00000542128 PSD3Q9NYI0 1048 aa13.98□□□□□ -0.17
KDM3A-216ENST00000542128 TPX2Q9ULW0 747 aaKnown RBP13.98□□□□□ -0.17
KDM3A-216ENST00000542128 PDE6BP35913 854 aa13.98□□□□□ -0.17
KDM3A-216ENST00000542128 NOP2P46087 812 aaKnown RBP13.98□□□□□ -0.17
KDM3A-216ENST00000542128 IFT81Q8WYA0 676 aa13.98□□□□□ -0.17
KDM3A-216ENST00000542128 ALS2CR12Q96Q35 445 aa13.98□□□□□ -0.17
KDM3A-216ENST00000542128 PPANQ9NQ55 473 aaKnown RBP13.98□□□□□ -0.17
KDM3A-216ENST00000542128 MTMR6Q9Y217 621 aa13.98□□□□□ -0.17
KDM3A-216ENST00000542128 ZFYVE9O95405 1425 aa13.97□□□□□ -0.17
KDM3A-216ENST00000542128 PALD1Q9ULE6 856 aa13.97□□□□□ -0.17
KDM3A-216ENST00000542128 HNRNPH1P31943 449 aaKnown RBP13.97□□□□□ -0.17
KDM3A-216ENST00000542128 ATP11AP98196 1134 aa13.97□□□□□ -0.17
KDM3A-216ENST00000542128 CDC37L1Q7L3B6 337 aa13.97□□□□□ -0.17
KDM3A-216ENST00000542128 PRPF38AQ8NAV1 312 aaKnown RBP13.97□□□□□ -0.17
KDM3A-216ENST00000542128 DESI2Q9BSY9 194 aa13.97□□□□□ -0.17
KDM3A-216ENST00000542128 ABCB6Q9NP58 842 aa13.97□□□□□ -0.17
KDM3A-216ENST00000542128 LRRD1A4D1F6 860 aa13.97□□□□□ -0.17
KDM3A-216ENST00000542128 CLTAP09496 248 aa13.97□□□□□ -0.17
KDM3A-216ENST00000542128 PHKG2P15735 406 aa13.97□□□□□ -0.17
KDM3A-216ENST00000542128 PDE4BQ07343 736 aa13.97□□□□□ -0.17
KDM3A-216ENST00000542128 MTX1Q13505 466 aa13.97□□□□□ -0.17
KDM3A-216ENST00000542128 MRPL50Q8N5N7 158 aaKnown RBP13.97□□□□□ -0.17
KDM3A-216ENST00000542128 KIF2CQ99661 725 aa13.97□□□□□ -0.17
KDM3A-216ENST00000542128 YIPF3Q9GZM5 350 aa13.97□□□□□ -0.17
KDM3A-216ENST00000542128 VCXQ9H320 206 aa13.97□□□□□ -0.17
KDM3A-216ENST00000542128 GOPCQ9HD26 462 aa13.97□□□□□ -0.17
KDM3A-216ENST00000542128 SAMD15Q9P1V8 674 aa13.97□□□□□ -0.17
KDM3A-216ENST00000542128 FHOD1Q9Y613 1164 aa13.97□□□□□ -0.17
KDM3A-216ENST00000542128 CDKL5O76039 1030 aa13.96□□□□□ -0.17
KDM3A-216ENST00000542128 TRIM68Q6AZZ1 485 aa13.96□□□□□ -0.17
KDM3A-216ENST00000542128 DPY19L2Q6NUT2 758 aa13.96□□□□□ -0.17
KDM3A-216ENST00000542128 PA2G4Q9UQ80 394 aaKnown RBP13.96□□□□□ -0.17
KDM3A-216ENST00000542128 POLR3AO14802 1390 aaPredicted RBP13.96□□□□□ -0.17
KDM3A-216ENST00000542128 NPC1L1Q9UHC9 1359 aa13.96□□□□□ -0.17
KDM3A-216ENST00000542128 RANBP1P43487 201 aa13.96□□□□□ -0.17
KDM3A-216ENST00000542128 EAPPQ56P03 285 aaPredicted RBP13.96□□□□□ -0.17
KDM3A-216ENST00000542128 VAT1LQ9HCJ6 419 aa13.96□□□□□ -0.17
KDM3A-216ENST00000542128 CDC23Q9UJX2 597 aa13.96□□□□□ -0.17
KDM3A-216ENST00000542128 SCP2P22307 547 aa13.96□□□□□ -0.17
KDM3A-216ENST00000542128 CCDC38Q502W7 563 aa13.96□□□□□ -0.17
KDM3A-216ENST00000542128 KRT86O43790 486 aa13.96□□□□□ -0.18
KDM3A-216ENST00000542128 CCDC40Q4G0X9 1142 aa13.96□□□□□ -0.18
KDM3A-216ENST00000542128 CCDC178Q5BJE1 867 aa13.96□□□□□ -0.18
KDM3A-216ENST00000542128 PLBD2Q8NHP8 589 aa13.96□□□□□ -0.18
KDM3A-216ENST00000542128 WDR17Q8IZU2 1322 aa13.95□□□□□ -0.18
KDM3A-216ENST00000542128 IFIT3O14879 490 aaKnown RBP13.95□□□□□ -0.18
KDM3A-216ENST00000542128 PRR29P0C7W0 189 aa13.95□□□□□ -0.18
KDM3A-216ENST00000542128 CEP85Q6P2H3 762 aa13.95□□□□□ -0.18
KDM3A-216ENST00000542128 RHPN1Q8TCX5 695 aa13.95□□□□□ -0.18
KDM3A-216ENST00000542128 GGA1Q9UJY5 639 aa13.95□□□□□ -0.18
KDM3A-216ENST00000542128 TTF2Q9UNY4 1162 aaKnown RBP13.95□□□□□ -0.18
KDM3A-216ENST00000542128 HAND2P61296 217 aa13.95□□□□□ -0.18
KDM3A-216ENST00000542128 ASAP1Q9ULH1 1129 aa13.95□□□□□ -0.18
KDM3A-216ENST00000542128 CCDC160A6NGH7 325 aa13.95□□□□□ -0.18
KDM3A-216ENST00000542128 ENO4A6NNW6 628 aa13.95□□□□□ -0.18
KDM3A-216ENST00000542128 GCFC2P16383 781 aaKnown RBP13.95□□□□□ -0.18
KDM3A-216ENST00000542128 DHX58Q96C10 678 aa13.95□□□□□ -0.18
KDM3A-216ENST00000542128 RBM8AQ9Y5S9 174 aaKnown RBP13.95□□□□□ -0.18
KDM3A-216ENST00000542128 GOLGA8KD6RF30 607 aa13.94□□□□□ -0.18
KDM3A-216ENST00000542128 GCOM1H8Y6P7 765 aaPredicted RBP13.94□□□□□ -0.18
KDM3A-216ENST00000542128 MYZAPP0CAP1 466 aa13.94□□□□□ -0.18
KDM3A-216ENST00000542128 SPTLC2O15270 562 aa13.94□□□□□ -0.18
KDM3A-216ENST00000542128 LUC7L3O95232 432 aaKnown RBP13.94□□□□□ -0.18
KDM3A-216ENST00000542128 NIM1KQ8IY84 436 aa13.94□□□□□ -0.18
KDM3A-216ENST00000542128 IFT74Q96LB3 600 aa13.94□□□□□ -0.18
KDM3A-216ENST00000542128 TSC22D3Q99576 134 aa13.94□□□□□ -0.18
KDM3A-216ENST00000542128 SNX14Q9Y5W7 946 aa13.94□□□□□ -0.18
KDM3A-216ENST00000542128 CDC42BPBQ9Y5S2 1711 aa13.94□□□□□ -0.18
KDM3A-216ENST00000542128 ALDH1B1P30837 517 aa13.94□□□□□ -0.18
KDM3A-216ENST00000542128 TRMT1LQ7Z2T5 733 aaKnown RBP13.94□□□□□ -0.18
KDM3A-216ENST00000542128 CCDC170Q8IYT3 715 aa13.94□□□□□ -0.18
KDM3A-216ENST00000542128 CACNA2D3Q8IZS8 1091 aa13.94□□□□□ -0.18
KDM3A-216ENST00000542128 TMEM87AQ8NBN3 555 aa13.94□□□□□ -0.18
KDM3A-216ENST00000542128 GCC2Q8IWJ2 1684 aa13.94□□□□□ -0.18
KDM3A-216ENST00000542128 PPIP5K2O43314 1243 aa13.94□□□□□ -0.18
KDM3A-216ENST00000542128 CYLC1P35663 651 aaPredicted RBP13.94□□□□□ -0.18
KDM3A-216ENST00000542128 ADKP55263 362 aaKnown RBP13.94□□□□□ -0.18
KDM3A-216ENST00000542128 TSNAXIP1Q2TAA8 658 aa13.94□□□□□ -0.18
KDM3A-216ENST00000542128 SLC9C2Q5TAH2 1124 aa13.94□□□□□ -0.18
KDM3A-216ENST00000542128 SEPT14Q6ZU15 432 aa13.94□□□□□ -0.18
KDM3A-216ENST00000542128 CTAGE1Q96RT6 745 aa13.94□□□□□ -0.18
KDM3A-216ENST00000542128 NBPF3Q9H094 633 aa13.94□□□□□ -0.18
KDM3A-216ENST00000542128 LUC7L2Q9Y383 392 aaKnown RBP13.94□□□□□ -0.18
KDM3A-216ENST00000542128 SPATA31A3Q5VYP0 1347 aa13.93□□□□□ -0.18
KDM3A-216ENST00000542128 VAMP4O75379 141 aa13.93□□□□□ -0.18
KDM3A-216ENST00000542128 LDHBP07195 334 aaKnown RBP13.93□□□□□ -0.18
KDM3A-216ENST00000542128 RWDD2BP57060 319 aa13.93□□□□□ -0.18
KDM3A-216ENST00000542128 SF3A3Q12874 501 aaKnown RBP eCLIP13.93□□□□□ -0.182e-6■■■■□ 25
KDM3A-216ENST00000542128 SEPT7Q16181 437 aaKnown RBP13.93□□□□□ -0.18
KDM3A-216ENST00000542128 CCDC122Q5T0U0 273 aa13.93□□□□□ -0.18
KDM3A-216ENST00000542128 PLA2G4DQ86XP0 818 aa13.93□□□□□ -0.18
KDM3A-216ENST00000542128 PFDN1O60925 122 aa13.93□□□□□ -0.18
KDM3A-216ENST00000542128 TADA3O75528 432 aa13.93□□□□□ -0.18
KDM3A-216ENST00000542128 H2AFXP16104 143 aaPredicted RBP13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms