RNA–Protein interactions for RNA: ENST00000541713.5

PTPN1-202, Transcript of protein tyrosine phosphatase, non-receptor type 1, humanhuman

TSL 2 BASIC

Gene PTPN1, Length 3,469 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1-202ENST00000541713 TOB1P50616 345 aaPredicted RBP15.55■□□□□ 0.08
PTPN1-202ENST00000541713 NCAPHQ15003 741 aa15.55■□□□□ 0.08
PTPN1-202ENST00000541713 UBE3CQ15386 1083 aa15.55■□□□□ 0.08
PTPN1-202ENST00000541713 VGLL2Q8N8G2 317 aa15.55■□□□□ 0.08
PTPN1-202ENST00000541713 RIC1Q4ADV7 1423 aa15.54■□□□□ 0.08
PTPN1-202ENST00000541713 A0A1W2PQ27 194 aa15.54■□□□□ 0.08
PTPN1-202ENST00000541713 A0A1W2PQ64 194 aa15.54■□□□□ 0.08
PTPN1-202ENST00000541713 A0A1W2PQD8 194 aa15.54■□□□□ 0.08
PTPN1-202ENST00000541713 MYL5Q02045 173 aa15.54■□□□□ 0.08
PTPN1-202ENST00000541713 MTF1Q14872 753 aa15.54■□□□□ 0.08
PTPN1-202ENST00000541713 SRP68Q9UHB9 627 aaKnown RBP15.54■□□□□ 0.08
PTPN1-202ENST00000541713 MAGEB6P1A0A0J9YX57 407 aa15.54■□□□□ 0.08
PTPN1-202ENST00000541713 MCM7P33993 719 aa15.54■□□□□ 0.08
PTPN1-202ENST00000541713 PPARAQ07869 468 aa15.54■□□□□ 0.08
PTPN1-202ENST00000541713 NTRK3Q16288 839 aa15.54■□□□□ 0.08
PTPN1-202ENST00000541713 KRBA2Q6ZNG9 492 aa15.54■□□□□ 0.08
PTPN1-202ENST00000541713 COL5A2P05997 1499 aaPredicted RBP15.54■□□□□ 0.08
PTPN1-202ENST00000541713 A0A0U1RQJ8 604 aa15.53■□□□□ 0.08
PTPN1-202ENST00000541713 NKX1-1Q15270 411 aaPredicted RBP15.53■□□□□ 0.08
PTPN1-202ENST00000541713 MTERF4Q7Z6M4 381 aaKnown RBP15.53■□□□□ 0.08
PTPN1-202ENST00000541713 FANCBQ8NB91 859 aa15.53■□□□□ 0.08
PTPN1-202ENST00000541713 ATRIPQ8WXE1 791 aa15.53■□□□□ 0.08
PTPN1-202ENST00000541713 UTRNP46939 3433 aa15.53■□□□□ 0.08
PTPN1-202ENST00000541713 LOC102724428A0A0B4J2F2 783 aa15.53■□□□□ 0.08
PTPN1-202ENST00000541713 TCRBV5S4A2TA0A5A2 114 aa15.53■□□□□ 0.08
PTPN1-202ENST00000541713 TULP1O00294 542 aaPredicted RBP15.53■□□□□ 0.08
PTPN1-202ENST00000541713 SIK1P57059 783 aa15.53■□□□□ 0.08
PTPN1-202ENST00000541713 SOS2Q07890 1332 aaPredicted RBP15.53■□□□□ 0.08
PTPN1-202ENST00000541713 CCDC152Q4G0S7 254 aa15.53■□□□□ 0.08
PTPN1-202ENST00000541713 CELF1Q92879 486 aaKnown RBP15.53■□□□□ 0.08
PTPN1-202ENST00000541713 RAD21O60216 631 aa15.53■□□□□ 0.08
PTPN1-202ENST00000541713 TFRCP02786 760 aaKnown RBP15.53■□□□□ 0.08
PTPN1-202ENST00000541713 GNG11P61952 73 aa15.53■□□□□ 0.08
PTPN1-202ENST00000541713 PTPAQ15257 358 aa15.53■□□□□ 0.08
PTPN1-202ENST00000541713 IFIT1BQ5T764 474 aaKnown RBP15.53■□□□□ 0.08
PTPN1-202ENST00000541713 TRERF1Q96PN7 1200 aa15.53■□□□□ 0.08
PTPN1-202ENST00000541713 VAT1LQ9HCJ6 419 aa15.53■□□□□ 0.08
PTPN1-202ENST00000541713 CCDC87Q9NVE4 849 aa15.53■□□□□ 0.08
PTPN1-202ENST00000541713 RNF216Q9NWF9 866 aaPredicted RBP15.53■□□□□ 0.08
PTPN1-202ENST00000541713 POLR3GO15318 223 aaPredicted RBP15.52■□□□□ 0.08
PTPN1-202ENST00000541713 FBXO38Q6PIJ6 1188 aa15.52■□□□□ 0.08
PTPN1-202ENST00000541713 MNS1Q8NEH6 495 aa15.52■□□□□ 0.08
PTPN1-202ENST00000541713 GPKOWQ92917 476 aaPredicted RBP eCLIP15.52■□□□□ 0.08
PTPN1-202ENST00000541713 SMARCE1Q969G3 411 aa15.52■□□□□ 0.08
PTPN1-202ENST00000541713 ADAMTS3O15072 1205 aa15.52■□□□□ 0.08
PTPN1-202ENST00000541713 TRIM28Q13263 835 aaKnown RBP15.52■□□□□ 0.08
PTPN1-202ENST00000541713 KMT5BQ4FZB7 885 aa15.52■□□□□ 0.08
PTPN1-202ENST00000541713 SARM1Q6SZW1 724 aa15.52■□□□□ 0.08
PTPN1-202ENST00000541713 RASGRP2Q7LDG7 609 aa15.52■□□□□ 0.08
PTPN1-202ENST00000541713 HINFPQ9BQA5 517 aa15.52■□□□□ 0.08
PTPN1-202ENST00000541713 CARD6Q9BX69 1037 aa15.52■□□□□ 0.08
PTPN1-202ENST00000541713 PAXBP1Q9Y5B6 917 aa15.52■□□□□ 0.08
PTPN1-202ENST00000541713 POSTNQ15063 836 aa15.52■□□□□ 0.07
PTPN1-202ENST00000541713 FAM98CQ17RN3 349 aaKnown RBP15.52■□□□□ 0.07
PTPN1-202ENST00000541713 PIK3AP1Q6ZUJ8 805 aa15.52■□□□□ 0.07
PTPN1-202ENST00000541713 TMEM87BQ96K49 555 aa15.52■□□□□ 0.07
PTPN1-202ENST00000541713 TEX33O43247 280 aa15.51■□□□□ 0.07
PTPN1-202ENST00000541713 CAVIN2O95810 425 aa15.51■□□□□ 0.07
PTPN1-202ENST00000541713 ARHGAP29Q52LW3 1261 aa15.51■□□□□ 0.07
PTPN1-202ENST00000541713 TEX35Q5T0J7 233 aa15.51■□□□□ 0.07
PTPN1-202ENST00000541713 PRDX5P30044 214 aa15.51■□□□□ 0.07
PTPN1-202ENST00000541713 MAN1B1Q9UKM7 699 aa15.51■□□□□ 0.07
PTPN1-202ENST00000541713 SEC31AO94979 1220 aaKnown RBP15.51■□□□□ 0.07
PTPN1-202ENST00000541713 MAP3K14Q99558 947 aa15.51■□□□□ 0.07
PTPN1-202ENST00000541713 SAP30BPQ9UHR5 308 aaKnown RBP15.51■□□□□ 0.07
PTPN1-202ENST00000541713 SCN11AQ9UI33 1791 aa15.5■□□□□ 0.07
PTPN1-202ENST00000541713 ARFGEF2Q9Y6D5 1785 aa15.5■□□□□ 0.07
PTPN1-202ENST00000541713 MMP1P03956 469 aa15.5■□□□□ 0.07
PTPN1-202ENST00000541713 GOLGA8HP0CJ92 632 aa15.5■□□□□ 0.07
PTPN1-202ENST00000541713 GTF2F1P35269 517 aaKnown RBP eCLIP15.5■□□□□ 0.07
PTPN1-202ENST00000541713 ANKRD18AQ8IVF6 992 aa15.5■□□□□ 0.07
PTPN1-202ENST00000541713 RFX7Q2KHR2 1363 aa15.5■□□□□ 0.07
PTPN1-202ENST00000541713 GSDMDP57764 484 aa15.5■□□□□ 0.07
PTPN1-202ENST00000541713 ATL3Q6DD88 541 aa15.5■□□□□ 0.07
PTPN1-202ENST00000541713 CRACR2BQ8N4Y2 399 aaPredicted RBP15.5■□□□□ 0.07
PTPN1-202ENST00000541713 DYNLL2Q96FJ2 89 aa15.5■□□□□ 0.07
PTPN1-202ENST00000541713 KRT23Q9C075 422 aa15.5■□□□□ 0.07
PTPN1-202ENST00000541713 SLU7O95391 586 aaKnown RBP15.49■□□□□ 0.07
PTPN1-202ENST00000541713 NLRP5P59047 1200 aa15.49■□□□□ 0.07
PTPN1-202ENST00000541713 TOGARAM2Q6ZUX3 1019 aa15.49■□□□□ 0.07
PTPN1-202ENST00000541713 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.49■□□□□ 0.07
PTPN1-202ENST00000541713 VPS16Q9H269 839 aa15.49■□□□□ 0.07
PTPN1-202ENST00000541713 CPDO75976 1380 aa15.49■□□□□ 0.07
PTPN1-202ENST00000541713 TSPY2A6NKD2 308 aa15.49■□□□□ 0.07
PTPN1-202ENST00000541713 INTS5Q6P9B9 1019 aaKnown RBP15.49■□□□□ 0.07
PTPN1-202ENST00000541713 HSD3B7Q9H2F3 369 aa15.49■□□□□ 0.07
PTPN1-202ENST00000541713 STX8Q9UNK0 236 aa15.49■□□□□ 0.07
PTPN1-202ENST00000541713 CRYBG1Q9Y4K1 1723 aa15.49■□□□□ 0.07
PTPN1-202ENST00000541713 A0A087X0B3 334 aa15.49■□□□□ 0.07
PTPN1-202ENST00000541713 TXNRD3Q86VQ6 643 aa15.49■□□□□ 0.07
PTPN1-202ENST00000541713 ENAHQ8N8S7 591 aaPredicted RBP15.49■□□□□ 0.07
PTPN1-202ENST00000541713 ESR2Q92731 530 aa15.49■□□□□ 0.07
PTPN1-202ENST00000541713 MROH5Q6ZUA9 1318 aa15.49■□□□□ 0.07
PTPN1-202ENST00000541713 FAM170AA1A519 330 aa15.48■□□□□ 0.07
PTPN1-202ENST00000541713 FMNL1O95466 1100 aaPredicted RBP15.48■□□□□ 0.07
PTPN1-202ENST00000541713 EVCP57679 992 aa15.48■□□□□ 0.07
PTPN1-202ENST00000541713 CAVIN4Q5BKX8 364 aa15.48■□□□□ 0.07
PTPN1-202ENST00000541713 RESP18Q5W5W9 173 aa15.48■□□□□ 0.07
PTPN1-202ENST00000541713 ZNF34Q8IZ26 560 aa15.48■□□□□ 0.07
PTPN1-202ENST00000541713 SLC44A5Q8NCS7 719 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms