RNA–Protein interactions for RNA: ENST00000541576.5

THBS3-210, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 3,200 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-210ENST00000541576 SCRN1Q12765 414 aa10.19□□□□□ -0.78
THBS3-210ENST00000541576 SART3Q15020 963 aaKnown RBP10.19□□□□□ -0.78
THBS3-210ENST00000541576 SLC4A8Q2Y0W8 1093 aa10.19□□□□□ -0.78
THBS3-210ENST00000541576 SENP2Q9HC62 589 aa10.19□□□□□ -0.78
THBS3-210ENST00000541576 ZNRF3Q9ULT6 936 aa10.19□□□□□ -0.78
THBS3-210ENST00000541576 COL4A5P29400 1685 aa10.19□□□□□ -0.78
THBS3-210ENST00000541576 KLF18A0A0U1RQI7 1052 aa10.18□□□□□ -0.78
THBS3-210ENST00000541576 NFKBIEO00221 500 aa10.18□□□□□ -0.78
THBS3-210ENST00000541576 IFIT3O14879 490 aaKnown RBP10.18□□□□□ -0.78
THBS3-210ENST00000541576 PRDM1O75626 825 aa10.18□□□□□ -0.78
THBS3-210ENST00000541576 RAD17O75943 681 aa10.18□□□□□ -0.78
THBS3-210ENST00000541576 BRD1O95696 1058 aa10.18□□□□□ -0.78
THBS3-210ENST00000541576 POLR3DP05423 398 aaPredicted RBP10.18□□□□□ -0.78
THBS3-210ENST00000541576 TMEM67Q5HYA8 995 aa10.18□□□□□ -0.78
THBS3-210ENST00000541576 APOBEC3HQ6NTF7 200 aaKnown RBP10.18□□□□□ -0.78
THBS3-210ENST00000541576 IGDCC4Q8TDY8 1250 aa10.18□□□□□ -0.78
THBS3-210ENST00000541576 ZDHHC15Q96MV8 337 aa10.18□□□□□ -0.78
THBS3-210ENST00000541576 USP40Q9NVE5 1235 aa10.18□□□□□ -0.78
THBS3-210ENST00000541576 SAP30BPQ9UHR5 308 aaKnown RBP10.18□□□□□ -0.78
THBS3-210ENST00000541576 MYO3BQ8WXR4 1341 aa10.18□□□□□ -0.78
THBS3-210ENST00000541576 PSME4Q14997 1843 aa10.18□□□□□ -0.78
THBS3-210ENST00000541576 ORC4O43929 436 aa10.18□□□□□ -0.78
THBS3-210ENST00000541576 RANBP6O60518 1105 aaKnown RBP10.18□□□□□ -0.78
THBS3-210ENST00000541576 RBM5P52756 815 aaKnown RBP eCLIP10.18□□□□□ -0.78
THBS3-210ENST00000541576 CCT2P78371 535 aaKnown RBP10.18□□□□□ -0.78
THBS3-210ENST00000541576 RSBN1LQ6PCB5 846 aaPredicted RBP10.18□□□□□ -0.78
THBS3-210ENST00000541576 CHAMP1Q96JM3 812 aa10.18□□□□□ -0.78
THBS3-210ENST00000541576 MTA3Q9BTC8 594 aa10.18□□□□□ -0.78
THBS3-210ENST00000541576 NCOA5Q9HCD5 579 aaKnown RBP10.18□□□□□ -0.78
THBS3-210ENST00000541576 SERPINA10Q9UK55 444 aa10.18□□□□□ -0.78
THBS3-210ENST00000541576 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.18□□□□□ -0.78
THBS3-210ENST00000541576 ERICH2A1L162 156 aa10.18□□□□□ -0.78
THBS3-210ENST00000541576 GOLGA8BA8MQT2 603 aa10.18□□□□□ -0.78
THBS3-210ENST00000541576 PSMD14O00487 310 aa10.18□□□□□ -0.78
THBS3-210ENST00000541576 JAK2O60674 1132 aa10.18□□□□□ -0.78
THBS3-210ENST00000541576 SYT1P21579 422 aa10.18□□□□□ -0.78
THBS3-210ENST00000541576 LIFRP42702 1097 aa10.18□□□□□ -0.78
THBS3-210ENST00000541576 JDP2Q8WYK2 163 aa10.18□□□□□ -0.78
THBS3-210ENST00000541576 UBAC1Q9BSL1 405 aa10.18□□□□□ -0.78
THBS3-210ENST00000541576 LY9Q9HBG7 655 aa10.18□□□□□ -0.78
THBS3-210ENST00000541576 ADAMTSL1Q8N6G6 1762 aa10.18□□□□□ -0.78
THBS3-210ENST00000541576 WDHD1O75717 1129 aaPredicted RBP10.17□□□□□ -0.78
THBS3-210ENST00000541576 VIL1P09327 827 aaKnown RBP10.17□□□□□ -0.78
THBS3-210ENST00000541576 PICALMQ13492 652 aa10.17□□□□□ -0.78
THBS3-210ENST00000541576 CDC42EP5Q6NZY7 148 aa10.17□□□□□ -0.78
THBS3-210ENST00000541576 SGMS1Q86VZ5 419 aa10.17□□□□□ -0.78
THBS3-210ENST00000541576 CHMP4CQ96CF2 233 aa10.17□□□□□ -0.78
THBS3-210ENST00000541576 ZKSCAN3Q9BRR0 538 aa10.17□□□□□ -0.78
THBS3-210ENST00000541576 ROBO3Q96MS0 1386 aa10.17□□□□□ -0.78
THBS3-210ENST00000541576 CTDNEP1O95476 244 aa10.17□□□□□ -0.78
THBS3-210ENST00000541576 PLCD1P51178 756 aa10.17□□□□□ -0.78
THBS3-210ENST00000541576 NFXL1Q6ZNB6 911 aa10.17□□□□□ -0.78
THBS3-210ENST00000541576 CLEC17AQ6ZS10 378 aa10.17□□□□□ -0.78
THBS3-210ENST00000541576 ILDR2Q71H61 639 aa10.17□□□□□ -0.78
THBS3-210ENST00000541576 RAB11FIP4Q86YS3 637 aa10.17□□□□□ -0.78
THBS3-210ENST00000541576 HPS5Q9UPZ3 1129 aa10.17□□□□□ -0.78
THBS3-210ENST00000541576 BAG4O95429 457 aaKnown RBP10.16□□□□□ -0.78
THBS3-210ENST00000541576 WTAPQ15007 396 aa10.16□□□□□ -0.78
THBS3-210ENST00000541576 DYNLL2Q96FJ2 89 aa10.16□□□□□ -0.78
THBS3-210ENST00000541576 LLPHQ9BRT6 129 aaKnown RBP10.16□□□□□ -0.78
THBS3-210ENST00000541576 R3HCC1Q9Y3T6 440 aaKnown RBP10.16□□□□□ -0.78
THBS3-210ENST00000541576 FOCADQ5VW36 1801 aa10.16□□□□□ -0.78
THBS3-210ENST00000541576 LTBP3Q9NS15 1303 aa10.16□□□□□ -0.78
THBS3-210ENST00000541576 NT5C2P49902 561 aa10.16□□□□□ -0.78
THBS3-210ENST00000541576 IQCA1Q86XH1 822 aa10.16□□□□□ -0.78
THBS3-210ENST00000541576 TMTC2Q8N394 836 aa10.16□□□□□ -0.78
THBS3-210ENST00000541576 PCDHAC2Q9Y5I4 1007 aa10.16□□□□□ -0.78
THBS3-210ENST00000541576 MYH1P12882 1939 aa10.16□□□□□ -0.78
THBS3-210ENST00000541576 TNKSO95271 1327 aa10.16□□□□□ -0.78
THBS3-210ENST00000541576 DDX60LQ5H9U9 1706 aaKnown RBP10.16□□□□□ -0.78
THBS3-210ENST00000541576 CCDC69A6NI79 296 aa10.16□□□□□ -0.78
THBS3-210ENST00000541576 PPFIA3O75145 1194 aa10.16□□□□□ -0.78
THBS3-210ENST00000541576 MRE11P49959 708 aa10.16□□□□□ -0.78
THBS3-210ENST00000541576 APOA5Q6Q788 366 aa10.16□□□□□ -0.78
THBS3-210ENST00000541576 ZSCAN10Q96SZ4 725 aaPredicted RBP10.16□□□□□ -0.78
THBS3-210ENST00000541576 MKNK2Q9HBH9 465 aa10.16□□□□□ -0.78
THBS3-210ENST00000541576 ZNF287Q9HBT7 754 aa10.16□□□□□ -0.78
THBS3-210ENST00000541576 DDX4Q9NQI0 724 aaKnown RBP10.16□□□□□ -0.78
THBS3-210ENST00000541576 SLC12A7Q9Y666 1083 aa10.16□□□□□ -0.78
THBS3-210ENST00000541576 WDR33Q9C0J8 1336 aaKnown RBP10.15□□□□□ -0.78
THBS3-210ENST00000541576 ARFGEF1Q9Y6D6 1849 aa10.15□□□□□ -0.78
THBS3-210ENST00000541576 STX6O43752 255 aa10.15□□□□□ -0.78
THBS3-210ENST00000541576 DHX16O60231 1041 aaKnown RBP10.15□□□□□ -0.78
THBS3-210ENST00000541576 CXCL9Q07325 125 aa10.15□□□□□ -0.78
THBS3-210ENST00000541576 CFAP100Q494V2 611 aa10.15□□□□□ -0.78
THBS3-210ENST00000541576 GAS2L3Q86XJ1 694 aa10.15□□□□□ -0.78
THBS3-210ENST00000541576 OGFOD1Q8N543 542 aa10.15□□□□□ -0.78
THBS3-210ENST00000541576 NSUN7Q8NE18 718 aaKnown RBP10.15□□□□□ -0.78
THBS3-210ENST00000541576 DDX11Q96FC9 970 aa10.15□□□□□ -0.78
THBS3-210ENST00000541576 GMLQ99445 158 aa10.15□□□□□ -0.78
THBS3-210ENST00000541576 FHDC1Q9C0D6 1143 aaPredicted RBP10.15□□□□□ -0.78
THBS3-210ENST00000541576 HDAC9Q9UKV0 1011 aa10.15□□□□□ -0.78
THBS3-210ENST00000541576 UTRNP46939 3433 aa10.15□□□□□ -0.78
THBS3-210ENST00000541576 TSPY2A6NKD2 308 aa10.15□□□□□ -0.78
THBS3-210ENST00000541576 ZBTB43O43298 467 aa10.15□□□□□ -0.78
THBS3-210ENST00000541576 PDCP20941 246 aa10.15□□□□□ -0.78
THBS3-210ENST00000541576 RASSF7Q02833 373 aa10.15□□□□□ -0.78
THBS3-210ENST00000541576 FAM47AQ5JRC9 791 aa10.15□□□□□ -0.78
THBS3-210ENST00000541576 CIAPIN1Q6FI81 312 aa10.15□□□□□ -0.78
THBS3-210ENST00000541576 SYNE3Q6ZMZ3 975 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 94.2 ms