RNA–Protein interactions for RNA: ENST00000541366.1

COPA-205, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-205ENST00000541366 RPTORQ8N122 1335 aa14.75□□□□□ -0.05
COPA-205ENST00000541366 CAPN2P17655 700 aa14.75□□□□□ -0.05
COPA-205ENST00000541366 HMX1Q9NP08 348 aaPredicted RBP14.75□□□□□ -0.05
COPA-205ENST00000541366 PRUNE2Q8WUY3 3088 aa14.75□□□□□ -0.05
COPA-205ENST00000541366 PLXNB2O15031 1838 aa14.75□□□□□ -0.05
COPA-205ENST00000541366 SPTBN5Q9NRC6 3674 aaKnown RBP14.74□□□□□ -0.05
COPA-205ENST00000541366 ADORA1P30542 326 aa14.74□□□□□ -0.05
COPA-205ENST00000541366 DSG3P32926 999 aa14.74□□□□□ -0.05
COPA-205ENST00000541366 SPP2Q13103 211 aa14.74□□□□□ -0.05
COPA-205ENST00000541366 ATP2B3Q16720 1220 aa14.74□□□□□ -0.05
COPA-205ENST00000541366 TRIB2Q92519 343 aa14.74□□□□□ -0.05
COPA-205ENST00000541366 GAKO14976 1311 aa14.73□□□□□ -0.05
COPA-205ENST00000541366 SALL1Q9NSC2 1324 aa14.73□□□□□ -0.05
COPA-205ENST00000541366 CYP2B6P20813 491 aa14.73□□□□□ -0.05
COPA-205ENST00000541366 HMGCS2P54868 508 aa14.73□□□□□ -0.05
COPA-205ENST00000541366 RRP1BQ14684 758 aaKnown RBP14.73□□□□□ -0.05
COPA-205ENST00000541366 MRPL50Q8N5N7 158 aaKnown RBP14.73□□□□□ -0.05
COPA-205ENST00000541366 OGDHLQ9ULD0 1010 aa14.73□□□□□ -0.05
COPA-205ENST00000541366 BTDP43251 543 aa14.72□□□□□ -0.05
COPA-205ENST00000541366 MDM2Q00987 491 aaPredicted RBP14.72□□□□□ -0.05
COPA-205ENST00000541366 FAM161BQ96MY7 647 aa14.72□□□□□ -0.05
COPA-205ENST00000541366 GUCD1Q96NT3 240 aa14.72□□□□□ -0.05
COPA-205ENST00000541366 ASCC2Q9H1I8 757 aaPredicted RBP14.72□□□□□ -0.05
COPA-205ENST00000541366 MRS2Q9HD23 443 aa14.72□□□□□ -0.05
COPA-205ENST00000541366 GNL3LQ9NVN8 582 aaKnown RBP14.72□□□□□ -0.05
COPA-205ENST00000541366 ABCF2Q9UG63 623 aa14.72□□□□□ -0.05
COPA-205ENST00000541366 PNMA3Q9UL41 463 aa14.72□□□□□ -0.05
COPA-205ENST00000541366 DENND2AQ9ULE3 1009 aa14.72□□□□□ -0.05
COPA-205ENST00000541366 LOC285556D6RIA3 1793 aa14.71□□□□□ -0.05
COPA-205ENST00000541366 PRKAR2AP13861 404 aaKnown RBP14.71□□□□□ -0.05
COPA-205ENST00000541366 GCLCP48506 637 aaPredicted RBP14.71□□□□□ -0.05
COPA-205ENST00000541366 DZIP1Q86YF9 867 aaKnown RBP14.71□□□□□ -0.05
COPA-205ENST00000541366 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.71□□□□□ -0.05
COPA-205ENST00000541366 PROCA1Q8NCQ7 364 aaPredicted RBP14.71□□□□□ -0.05
COPA-205ENST00000541366 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.71□□□□□ -0.05
COPA-205ENST00000541366 CDH23Q9H251 3354 aa14.7□□□□□ -0.06
COPA-205ENST00000541366 RHBDL3P58872 404 aa14.7□□□□□ -0.06
COPA-205ENST00000541366 RASGRF1Q13972 1273 aa14.7□□□□□ -0.06
COPA-205ENST00000541366 LRRC26Q2I0M4 334 aa14.7□□□□□ -0.06
COPA-205ENST00000541366 MAP3K21Q5TCX8 1036 aa14.7□□□□□ -0.06
COPA-205ENST00000541366 CCDC102BQ68D86 513 aa14.7□□□□□ -0.06
COPA-205ENST00000541366 ZNF280CQ8ND82 737 aa14.7□□□□□ -0.06
COPA-205ENST00000541366 ZNF384Q8TF68 577 aa14.7□□□□□ -0.06
COPA-205ENST00000541366 CEP126Q9P2H0 1117 aa14.7□□□□□ -0.06
COPA-205ENST00000541366 PA2G4Q9UQ80 394 aaKnown RBP14.7□□□□□ -0.06
COPA-205ENST00000541366 ATAD5Q96QE3 1844 aa14.69□□□□□ -0.06
COPA-205ENST00000541366 COL6A1P12109 1028 aa14.69□□□□□ -0.06
COPA-205ENST00000541366 TXNRD2Q9NNW7 524 aa14.69□□□□□ -0.06
COPA-205ENST00000541366 MROH7-TTC4A0A0A0MT08 1334 aa14.68□□□□□ -0.06
COPA-205ENST00000541366 POTEB2H3BUK9 544 aa14.68□□□□□ -0.06
COPA-205ENST00000541366 SEMA3EO15041 775 aa14.68□□□□□ -0.06
COPA-205ENST00000541366 TBC1D12O60347 775 aa14.68□□□□□ -0.06
COPA-205ENST00000541366 CCND3P30281 292 aaPredicted RBP14.68□□□□□ -0.06
COPA-205ENST00000541366 TIMM10P62072 90 aa14.68□□□□□ -0.06
COPA-205ENST00000541366 CACNB2Q08289 660 aaPredicted RBP14.68□□□□□ -0.06
COPA-205ENST00000541366 CCL14Q16627 93 aa14.68□□□□□ -0.06
COPA-205ENST00000541366 FAM163AQ96GL9 167 aaPredicted RBP14.68□□□□□ -0.06
COPA-205ENST00000541366 P2RX7Q99572 595 aaKnown RBP14.68□□□□□ -0.06
COPA-205ENST00000541366 MORF4L1Q9UBU8 362 aa14.68□□□□□ -0.06
COPA-205ENST00000541366 GPR75-ASB3A0A0A6YYF3 556 aa14.67□□□□□ -0.06
COPA-205ENST00000541366 CIAO1O76071 339 aa14.67□□□□□ -0.06
COPA-205ENST00000541366 JAG1P78504 1218 aa14.67□□□□□ -0.06
COPA-205ENST00000541366 MECOMQ03112 1051 aa14.67□□□□□ -0.06
COPA-205ENST00000541366 SHROOM1Q2M3G4 852 aaPredicted RBP14.67□□□□□ -0.06
COPA-205ENST00000541366 LHX8Q68G74 356 aa14.67□□□□□ -0.06
COPA-205ENST00000541366 ZGPATQ8N5A5 531 aaKnown RBP14.67□□□□□ -0.06
COPA-205ENST00000541366 SSH1Q8WYL5 1049 aa14.67□□□□□ -0.06
COPA-205ENST00000541366 OSBPL5Q9H0X9 879 aaPredicted RBP14.67□□□□□ -0.06
COPA-205ENST00000541366 PTPRCP08575 1304 aa14.66□□□□□ -0.06
COPA-205ENST00000541366 USP17L5A8MUK1 530 aa14.66□□□□□ -0.06
COPA-205ENST00000541366 CAP2P40123 477 aa14.66□□□□□ -0.06
COPA-205ENST00000541366 PABPC4Q13310 644 aaKnown RBP eCLIP14.66□□□□□ -0.06
COPA-205ENST00000541366 MTMR2Q13614 643 aa14.66□□□□□ -0.06
COPA-205ENST00000541366 Q3C1V9 767 aa14.66□□□□□ -0.06
COPA-205ENST00000541366 SH3D19Q5HYK7 790 aa14.66□□□□□ -0.06
COPA-205ENST00000541366 NUDT12Q9BQG2 462 aa14.66□□□□□ -0.06
COPA-205ENST00000541366 PORCNQ9H237 461 aa14.66□□□□□ -0.06
COPA-205ENST00000541366 ZKSCAN1P17029 563 aaPredicted RBP14.65□□□□□ -0.06
COPA-205ENST00000541366 IRX3P78415 501 aaPredicted RBP14.65□□□□□ -0.06
COPA-205ENST00000541366 POTEEQ6S8J3 1075 aa14.65□□□□□ -0.06
COPA-205ENST00000541366 PI16Q6UXB8 463 aa14.65□□□□□ -0.06
COPA-205ENST00000541366 TBC1D9Q6ZT07 1266 aa14.65□□□□□ -0.06
COPA-205ENST00000541366 SLF2Q8IX21 1173 aa14.65□□□□□ -0.06
COPA-205ENST00000541366 USP6NLQ92738 828 aa14.65□□□□□ -0.06
COPA-205ENST00000541366 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.65□□□□□ -0.06
COPA-205ENST00000541366 XRCC5P13010 732 aaKnown RBP14.64□□□□□ -0.07
COPA-205ENST00000541366 IL15P40933 162 aaPredicted RBP14.64□□□□□ -0.07
COPA-205ENST00000541366 HERVK_113P62684 666 aa14.64□□□□□ -0.07
COPA-205ENST00000541366 SPTY2D1Q68D10 685 aaPredicted RBP14.64□□□□□ -0.07
COPA-205ENST00000541366 ERICH6Q7L0X2 663 aa14.64□□□□□ -0.07
COPA-205ENST00000541366 RBPJLQ9UBG7 517 aa14.64□□□□□ -0.07
COPA-205ENST00000541366 FBXO3Q9UK99 471 aa14.64□□□□□ -0.07
COPA-205ENST00000541366 SIPA1L1O43166 1804 aa14.64□□□□□ -0.07
COPA-205ENST00000541366 TTC28Q96AY4 2481 aa14.64□□□□□ -0.07
COPA-205ENST00000541366 COL2A1P02458 1487 aaPredicted RBP14.63□□□□□ -0.07
COPA-205ENST00000541366 UBTFL1P0CB47 393 aaPredicted RBP14.63□□□□□ -0.07
COPA-205ENST00000541366 FAM109BQ6ICB4 259 aaPredicted RBP14.63□□□□□ -0.07
COPA-205ENST00000541366 FAM9BQ8IZU0 186 aa14.63□□□□□ -0.07
COPA-205ENST00000541366 GPRC5AQ8NFJ5 357 aa14.63□□□□□ -0.07
COPA-205ENST00000541366 NSUN4Q96CB9 384 aaKnown RBP14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms