RNA–Protein interactions for RNA: ENST00000540975.5

YBX3-210, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-210ENST00000540975 KBTBD4Q9NVX7 518 aa10.4□□□□□ -0.74
YBX3-210ENST00000540975 PIM2Q9P1W9 311 aa10.4□□□□□ -0.74
YBX3-210ENST00000540975 SCO2A0A1W2PP80 73 aa10.39□□□□□ -0.75
YBX3-210ENST00000540975 PRAMEF27A3QJZ7 478 aa10.39□□□□□ -0.75
YBX3-210ENST00000540975 SSTR4P31391 388 aa10.39□□□□□ -0.75
YBX3-210ENST00000540975 CYP27A1Q02318 531 aa10.39□□□□□ -0.75
YBX3-210ENST00000540975 CPSF6Q16630 551 aaKnown RBP eCLIP10.39□□□□□ -0.75
YBX3-210ENST00000540975 ARTNQ5T4W7 220 aa10.39□□□□□ -0.75
YBX3-210ENST00000540975 INTS5Q6P9B9 1019 aaKnown RBP10.39□□□□□ -0.75
YBX3-210ENST00000540975 BNC2Q6ZN30 1099 aaPredicted RBP10.39□□□□□ -0.75
YBX3-210ENST00000540975 ZNF765Q7L2R6 523 aa10.39□□□□□ -0.75
YBX3-210ENST00000540975 KCT2Q8NC54 265 aa10.39□□□□□ -0.75
YBX3-210ENST00000540975 GGT7Q9UJ14 662 aa10.39□□□□□ -0.75
YBX3-210ENST00000540975 RPL6Q02878 288 aaKnown RBP10.38□□□□□ -0.75
YBX3-210ENST00000540975 LRP8Q14114 963 aa10.38□□□□□ -0.75
YBX3-210ENST00000540975 Q8N3U1 123 aa10.38□□□□□ -0.75
YBX3-210ENST00000540975 FAM221AA4D161 298 aa10.37□□□□□ -0.75
YBX3-210ENST00000540975 F13A1P00488 732 aa10.37□□□□□ -0.75
YBX3-210ENST00000540975 HOXA10P31260 410 aaPredicted RBP10.37□□□□□ -0.75
YBX3-210ENST00000540975 GRIK1P39086 918 aa10.37□□□□□ -0.75
YBX3-210ENST00000540975 CD97P48960 835 aa10.37□□□□□ -0.75
YBX3-210ENST00000540975 HS2ST1Q7LGA3 356 aa10.37□□□□□ -0.75
YBX3-210ENST00000540975 GATAD2BQ8WXI9 593 aa10.37□□□□□ -0.75
YBX3-210ENST00000540975 TACC3Q9Y6A5 838 aa10.37□□□□□ -0.75
YBX3-210ENST00000540975 CILPO75339 1184 aa10.36□□□□□ -0.75
YBX3-210ENST00000540975 FAM87AP0C7U9 286 aa10.36□□□□□ -0.75
YBX3-210ENST00000540975 FOSL1P15407 271 aa10.36□□□□□ -0.75
YBX3-210ENST00000540975 VAMP1P23763 118 aa10.36□□□□□ -0.75
YBX3-210ENST00000540975 ETF1P62495 437 aaKnown RBP10.36□□□□□ -0.75
YBX3-210ENST00000540975 FAM160A1Q05DH4 1040 aa10.36□□□□□ -0.75
YBX3-210ENST00000540975 CYP27C1Q4G0S4 372 aa10.36□□□□□ -0.75
YBX3-210ENST00000540975 DIEXFQ68CQ4 756 aaKnown RBP10.36□□□□□ -0.75
YBX3-210ENST00000540975 DUSP23Q9BVJ7 150 aa10.36□□□□□ -0.75
YBX3-210ENST00000540975 FBRSQ9HAH7 460 aa10.36□□□□□ -0.75
YBX3-210ENST00000540975 CYP26A1O43174 497 aa10.35□□□□□ -0.75
YBX3-210ENST00000540975 LEFTY1O75610 366 aa10.35□□□□□ -0.75
YBX3-210ENST00000540975 GARTP22102 1010 aa10.35□□□□□ -0.75
YBX3-210ENST00000540975 GRK4P32298 578 aa10.35□□□□□ -0.75
YBX3-210ENST00000540975 GOLM1Q8NBJ4 401 aa10.35□□□□□ -0.75
YBX3-210ENST00000540975 ZFP64Q9NPA5 681 aa10.35□□□□□ -0.75
YBX3-210ENST00000540975 EIF4A3P38919 411 aaKnown RBP10.34□□□□□ -0.75
YBX3-210ENST00000540975 SLBPQ14493 270 aaKnown RBP eCLIP10.34□□□□□ -0.75
YBX3-210ENST00000540975 FBXL19Q6PCT2 694 aa10.34□□□□□ -0.75
YBX3-210ENST00000540975 HID1Q8IV36 788 aa10.34□□□□□ -0.75
YBX3-210ENST00000540975 PCMTD2Q9NV79 361 aa10.34□□□□□ -0.75
YBX3-210ENST00000540975 LOC100996750A0A140TA64 210 aa10.33□□□□□ -0.76
YBX3-210ENST00000540975 UNCXA6NJT0 531 aa10.33□□□□□ -0.76
YBX3-210ENST00000540975 ZNF76P36508 570 aa10.33□□□□□ -0.76
YBX3-210ENST00000540975 NKG7Q16617 165 aa10.33□□□□□ -0.76
YBX3-210ENST00000540975 MRRFQ96E11 262 aaKnown RBP10.33□□□□□ -0.76
YBX3-210ENST00000540975 KRTAP4-6Q9BYQ5 205 aa10.33□□□□□ -0.76
YBX3-210ENST00000540975 KCNQ5Q9NR82 932 aa10.33□□□□□ -0.76
YBX3-210ENST00000540975 KIAA1324LA8MWY0 1029 aaPredicted RBP10.32□□□□□ -0.76
YBX3-210ENST00000540975 GREM1O60565 184 aa10.32□□□□□ -0.76
YBX3-210ENST00000540975 BPNT1O95861 308 aa10.32□□□□□ -0.76
YBX3-210ENST00000540975 CAP2P40123 477 aa10.32□□□□□ -0.76
YBX3-210ENST00000540975 FANCCQ00597 558 aa10.32□□□□□ -0.76
YBX3-210ENST00000540975 SNAP47Q5SQN1 464 aa10.32□□□□□ -0.76
YBX3-210ENST00000540975 TOP6BLQ8N6T0 577 aa10.32□□□□□ -0.76
YBX3-210ENST00000540975 LRRC4CQ9HCJ2 640 aa10.32□□□□□ -0.76
YBX3-210ENST00000540975 PRDM10Q9NQV6 1147 aa10.32□□□□□ -0.76
YBX3-210ENST00000540975 KIAA1522Q9P206 1035 aaPredicted RBP10.32□□□□□ -0.76
YBX3-210ENST00000540975 LRIG2O94898 1065 aa10.31□□□□□ -0.76
YBX3-210ENST00000540975 RECKO95980 971 aa10.31□□□□□ -0.76
YBX3-210ENST00000540975 PGRP06401 933 aa10.31□□□□□ -0.76
YBX3-210ENST00000540975 FAM196AQ6ZSG2 479 aa10.31□□□□□ -0.76
YBX3-210ENST00000540975 ARMCX6Q7L4S7 300 aa10.31□□□□□ -0.76
YBX3-210ENST00000540975 DTX1Q86Y01 620 aa10.31□□□□□ -0.76
YBX3-210ENST00000540975 ZNF296Q8WUU4 475 aaPredicted RBP10.31□□□□□ -0.76
YBX3-210ENST00000540975 FOXQ1Q9C009 403 aa10.31□□□□□ -0.76
YBX3-210ENST00000540975 METTL5Q9NRN9 209 aaKnown RBP10.31□□□□□ -0.76
YBX3-210ENST00000540975 ROBO2Q9HCK4 1378 aa10.3□□□□□ -0.76
YBX3-210ENST00000540975 PDE4BQ07343 736 aa10.3□□□□□ -0.76
YBX3-210ENST00000540975 FAM214BQ7L5A3 538 aa10.3□□□□□ -0.76
YBX3-210ENST00000540975 FBXO27Q8NI29 283 aa10.3□□□□□ -0.76
YBX3-210ENST00000540975 TJP2Q9UDY2 1190 aa10.3□□□□□ -0.76
YBX3-210ENST00000540975 ADAMTS1Q9UHI8 967 aa10.3□□□□□ -0.76
YBX3-210ENST00000540975 CORINQ9Y5Q5 1042 aa10.3□□□□□ -0.76
YBX3-210ENST00000540975 MPP2Q14168 576 aa10.29□□□□□ -0.76
YBX3-210ENST00000540975 MSMPQ1L6U9 139 aa10.29□□□□□ -0.76
YBX3-210ENST00000540975 ZC3H7BQ9UGR2 993 aaKnown RBP10.29□□□□□ -0.76
YBX3-210ENST00000540975 SUPT16HQ9Y5B9 1047 aaKnown RBP10.29□□□□□ -0.76
YBX3-210ENST00000540975 SCAMP3O14828 347 aaKnown RBP10.28□□□□□ -0.76
YBX3-210ENST00000540975 CST3P01034 146 aaPredicted RBP10.28□□□□□ -0.76
YBX3-210ENST00000540975 SPINK2P20155 84 aa10.28□□□□□ -0.76
YBX3-210ENST00000540975 MFSD2AQ8NA29 543 aa10.28□□□□□ -0.76
YBX3-210ENST00000540975 RNF34Q969K3 372 aa10.28□□□□□ -0.76
YBX3-210ENST00000540975 HEXIM2Q96MH2 286 aaKnown RBP10.28□□□□□ -0.76
YBX3-210ENST00000540975 ADAM30Q9UKF2 790 aa10.28□□□□□ -0.76
YBX3-210ENST00000540975 PRR36Q9H6K5 1346 aa10.28□□□□□ -0.76
YBX3-210ENST00000540975 EOMESO95936 686 aa10.27□□□□□ -0.77
YBX3-210ENST00000540975 SLC6A19Q695T7 634 aa10.27□□□□□ -0.77
YBX3-210ENST00000540975 REC114Q7Z4M0 266 aa10.27□□□□□ -0.77
YBX3-210ENST00000540975 MCATQ8IVS2 390 aaKnown RBP10.27□□□□□ -0.77
YBX3-210ENST00000540975 MRPL41Q8IXM3 137 aaKnown RBP10.27□□□□□ -0.77
YBX3-210ENST00000540975 POLR3KQ9Y2Y1 108 aaPredicted RBP10.27□□□□□ -0.77
YBX3-210ENST00000540975 TLR3O15455 904 aaKnown RBP10.26□□□□□ -0.77
YBX3-210ENST00000540975 SLITRK5O94991 958 aa10.26□□□□□ -0.77
YBX3-210ENST00000540975 PLCG1P19174 1290 aa10.26□□□□□ -0.77
YBX3-210ENST00000540975 PRAMEF13Q5VWM6 474 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms