RNA–Protein interactions for RNA: ENST00000540475.5

SEMA4D-223, Transcript of semaphorin 4D, humanhuman

TSL 3

Gene SEMA4D, Length 826 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-223ENST00000540475 MYH1P12882 1939 aa16.05■□□□□ 0.16
SEMA4D-223ENST00000540475 BCRP11274 1271 aa16.04■□□□□ 0.16
SEMA4D-223ENST00000540475 SIRT2Q8IXJ6 389 aa16.04■□□□□ 0.16
SEMA4D-223ENST00000540475 TBC1D2Q9BYX2 928 aa16.04■□□□□ 0.16
SEMA4D-223ENST00000540475 AATFQ9NY61 560 aaKnown RBP eCLIP16.04■□□□□ 0.16
SEMA4D-223ENST00000540475 PI4KBQ9UBF8 816 aa16.04■□□□□ 0.16
SEMA4D-223ENST00000540475 EXOC6BQ9Y2D4 811 aa16.04■□□□□ 0.16
SEMA4D-223ENST00000540475 CTGFP29279 349 aa16.03■□□□□ 0.16
SEMA4D-223ENST00000540475 RRP1BQ14684 758 aaKnown RBP16.03■□□□□ 0.16
SEMA4D-223ENST00000540475 KIF22Q14807 665 aa16.03■□□□□ 0.16
SEMA4D-223ENST00000540475 RHPN1Q8TCX5 695 aa16.03■□□□□ 0.16
SEMA4D-223ENST00000540475 ZNF333Q96JL9 665 aa16.03■□□□□ 0.16
SEMA4D-223ENST00000540475 PARK7Q99497 189 aaKnown RBP16.03■□□□□ 0.16
SEMA4D-223ENST00000540475 NOL10Q9BSC4 688 aaKnown RBP16.03■□□□□ 0.16
SEMA4D-223ENST00000540475 ARHGAP39Q9C0H5 1083 aa16.03■□□□□ 0.16
SEMA4D-223ENST00000540475 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.03■□□□□ 0.16
SEMA4D-223ENST00000540475 RCAN3Q9UKA8 241 aa16.03■□□□□ 0.16
SEMA4D-223ENST00000540475 PTCH2Q9Y6C5 1203 aa16.03■□□□□ 0.16
SEMA4D-223ENST00000540475 CAP2P40123 477 aa16.02■□□□□ 0.16
SEMA4D-223ENST00000540475 CERS3Q8IU89 383 aa16.02■□□□□ 0.16
SEMA4D-223ENST00000540475 FOXP4Q8IVH2 680 aaPredicted RBP16.02■□□□□ 0.16
SEMA4D-223ENST00000540475 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.02■□□□□ 0.16
SEMA4D-223ENST00000540475 CHMP4BQ9H444 224 aaKnown RBP16.02■□□□□ 0.16
SEMA4D-223ENST00000540475 CPA4Q9UI42 421 aa16.02■□□□□ 0.16
SEMA4D-223ENST00000540475 COG6Q9Y2V7 657 aa16.02■□□□□ 0.16
SEMA4D-223ENST00000540475 FLT1P17948 1338 aa16.01■□□□□ 0.15
SEMA4D-223ENST00000540475 DOCK3Q8IZD9 2030 aa16.01■□□□□ 0.15
SEMA4D-223ENST00000540475 POTEFA5A3E0 1075 aa16.01■□□□□ 0.15
SEMA4D-223ENST00000540475 FAM196BA6NMK8 535 aa16.01■□□□□ 0.15
SEMA4D-223ENST00000540475 PDE3AQ14432 1141 aa16.01■□□□□ 0.15
SEMA4D-223ENST00000540475 NBPF11Q86T75 865 aa16.01■□□□□ 0.15
SEMA4D-223ENST00000540475 TGFBRAP1Q8WUH2 860 aa16.01■□□□□ 0.15
SEMA4D-223ENST00000540475 TRIM47Q96LD4 638 aa16.01■□□□□ 0.15
SEMA4D-223ENST00000540475 RAB11FIP3O75154 756 aa16■□□□□ 0.15
SEMA4D-223ENST00000540475 CYP2C8P10632 490 aa16■□□□□ 0.15
SEMA4D-223ENST00000540475 PSMC4P43686 418 aa16■□□□□ 0.15
SEMA4D-223ENST00000540475 SH3D19Q5HYK7 790 aa16■□□□□ 0.15
SEMA4D-223ENST00000540475 AACSQ86V21 672 aa16■□□□□ 0.15
SEMA4D-223ENST00000540475 PROCA1Q8NCQ7 364 aaPredicted RBP16■□□□□ 0.15
SEMA4D-223ENST00000540475 ZNF280CQ8ND82 737 aa16■□□□□ 0.15
SEMA4D-223ENST00000540475 KIF1BPQ96EK5 621 aa16■□□□□ 0.15
SEMA4D-223ENST00000540475 WDR18Q9BV38 432 aa16■□□□□ 0.15
SEMA4D-223ENST00000540475 ANTXR1Q9H6X2 564 aa16■□□□□ 0.15
SEMA4D-223ENST00000540475 DNAJC18Q9H819 358 aa16■□□□□ 0.15
SEMA4D-223ENST00000540475 GINM1Q9NU53 330 aa16■□□□□ 0.15
SEMA4D-223ENST00000540475 SRRDQ9UH36 339 aa16■□□□□ 0.15
SEMA4D-223ENST00000540475 AGTPBP1Q9UPW5 1226 aa16■□□□□ 0.15
SEMA4D-223ENST00000540475 HMMRO75330 724 aa15.99■□□□□ 0.15
SEMA4D-223ENST00000540475 CYP7A1P22680 504 aa15.99■□□□□ 0.15
SEMA4D-223ENST00000540475 SLC9C1Q4G0N8 1177 aa15.99■□□□□ 0.15
SEMA4D-223ENST00000540475 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.99■□□□□ 0.15
SEMA4D-223ENST00000540475 DDX60LQ5H9U9 1706 aaKnown RBP15.99■□□□□ 0.15
SEMA4D-223ENST00000540475 TRIM75PA6NK02 468 aa15.98■□□□□ 0.15
SEMA4D-223ENST00000540475 USP17L5A8MUK1 530 aa15.98■□□□□ 0.15
SEMA4D-223ENST00000540475 IDH1O75874 414 aaKnown RBP15.98■□□□□ 0.15
SEMA4D-223ENST00000540475 OSBPP22059 807 aa15.98■□□□□ 0.15
SEMA4D-223ENST00000540475 HOXD10P28358 340 aa15.98■□□□□ 0.15
SEMA4D-223ENST00000540475 DYNLL1P63167 89 aaKnown RBP15.98■□□□□ 0.15
SEMA4D-223ENST00000540475 MAP3K12Q12852 859 aa15.98■□□□□ 0.15
SEMA4D-223ENST00000540475 SPP2Q13103 211 aa15.98■□□□□ 0.15
SEMA4D-223ENST00000540475 CCDC84Q86UT8 332 aaPredicted RBP15.98■□□□□ 0.15
SEMA4D-223ENST00000540475 MAPKAPK5Q8IW41 473 aa15.98■□□□□ 0.15
SEMA4D-223ENST00000540475 CLASRPQ8N2M8 674 aaKnown RBP15.98■□□□□ 0.15
SEMA4D-223ENST00000540475 MAGEB6Q8N7X4 407 aa15.98■□□□□ 0.15
SEMA4D-223ENST00000540475 IL1RAPL2Q9NP60 686 aa15.98■□□□□ 0.15
SEMA4D-223ENST00000540475 ASNSP08243 561 aa15.97■□□□□ 0.15
SEMA4D-223ENST00000540475 JAG1P78504 1218 aa15.97■□□□□ 0.15
SEMA4D-223ENST00000540475 TTF1Q15361 905 aaPredicted RBP15.97■□□□□ 0.15
SEMA4D-223ENST00000540475 TREML2Q5T2D2 321 aa15.97■□□□□ 0.15
SEMA4D-223ENST00000540475 GADL1Q6ZQY3 521 aa15.97■□□□□ 0.15
SEMA4D-223ENST00000540475 RIOK1Q9BRS2 568 aaKnown RBP15.97■□□□□ 0.15
SEMA4D-223ENST00000540475 PALD1Q9ULE6 856 aa15.97■□□□□ 0.15
SEMA4D-223ENST00000540475 NDUFB9Q9Y6M9 179 aa15.97■□□□□ 0.15
SEMA4D-223ENST00000540475 MYH7P12883 1935 aa15.97■□□□□ 0.15
SEMA4D-223ENST00000540475 PRPF38BQ5VTL8 546 aaKnown RBP15.96■□□□□ 0.15
SEMA4D-223ENST00000540475 TATDN1Q6P1N9 297 aa15.96■□□□□ 0.15
SEMA4D-223ENST00000540475 EHD4Q9H223 541 aa15.96■□□□□ 0.15
SEMA4D-223ENST00000540475 AS3MTQ9HBK9 375 aa15.96■□□□□ 0.15
SEMA4D-223ENST00000540475 FMNL1O95466 1100 aaPredicted RBP15.95■□□□□ 0.14
SEMA4D-223ENST00000540475 EN2P19622 333 aaPredicted RBP15.95■□□□□ 0.14
SEMA4D-223ENST00000540475 FCGRTP55899 365 aa15.95■□□□□ 0.14
SEMA4D-223ENST00000540475 BACE1P56817 501 aa15.95■□□□□ 0.14
SEMA4D-223ENST00000540475 C20orf194Q5TEA3 1177 aa15.95■□□□□ 0.14
SEMA4D-223ENST00000540475 SH3TC2Q8TF17 1288 aa15.95■□□□□ 0.14
SEMA4D-223ENST00000540475 TMEM106CQ9BVX2 250 aa15.95■□□□□ 0.14
SEMA4D-223ENST00000540475 PNMA3Q9UL41 463 aa15.95■□□□□ 0.14
SEMA4D-223ENST00000540475 NAV1Q8NEY1 1877 aa15.95■□□□□ 0.14
SEMA4D-223ENST00000540475 MYPNQ86TC9 1320 aa15.94■□□□□ 0.14
SEMA4D-223ENST00000540475 TCRBV5S4A2TA0A5A2 114 aa15.94■□□□□ 0.14
SEMA4D-223ENST00000540475 C19orf81C9J6K1 198 aa15.94■□□□□ 0.14
SEMA4D-223ENST00000540475 ATP5JP18859 108 aa15.94■□□□□ 0.14
SEMA4D-223ENST00000540475 HOXA7P31268 230 aaPredicted RBP15.94■□□□□ 0.14
SEMA4D-223ENST00000540475 GCLCP48506 637 aaPredicted RBP15.94■□□□□ 0.14
SEMA4D-223ENST00000540475 PABPC4Q13310 644 aaKnown RBP eCLIP15.94■□□□□ 0.14
SEMA4D-223ENST00000540475 MIGA1Q8NAN2 632 aa15.94■□□□□ 0.14
SEMA4D-223ENST00000540475 HLA-DOAP06340 250 aa15.93■□□□□ 0.14
SEMA4D-223ENST00000540475 IFIT2P09913 472 aaKnown RBP15.93■□□□□ 0.14
SEMA4D-223ENST00000540475 PDE6AP16499 860 aa15.93■□□□□ 0.14
SEMA4D-223ENST00000540475 HMGCS2P54868 508 aa15.93■□□□□ 0.14
SEMA4D-223ENST00000540475 IRF5Q13568 498 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms