RNA–Protein interactions for RNA: ENST00000540434.1

TMEM258-205, Transcript of transmembrane protein 258, humanhuman

TSL 2

Gene TMEM258, Length 553 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-205ENST00000540434 SNCAIPQ9Y6H5 919 aa13.98□□□□□ -0.17
TMEM258-205ENST00000540434 PRUNE2Q8WUY3 3088 aa13.98□□□□□ -0.17
TMEM258-205ENST00000540434 RAB11FIP3O75154 756 aa13.97□□□□□ -0.17
TMEM258-205ENST00000540434 IGHDP01880 384 aa13.97□□□□□ -0.17
TMEM258-205ENST00000540434 CETPP11597 493 aa13.97□□□□□ -0.17
TMEM258-205ENST00000540434 ELNP15502 786 aa13.97□□□□□ -0.17
TMEM258-205ENST00000540434 TNFAIP1Q13829 316 aa13.97□□□□□ -0.17
TMEM258-205ENST00000540434 TTC39AQ5SRH9 613 aa13.97□□□□□ -0.17
TMEM258-205ENST00000540434 ERC1Q8IUD2 1116 aa13.97□□□□□ -0.17
TMEM258-205ENST00000540434 ZDHHC15Q96MV8 337 aa13.97□□□□□ -0.17
TMEM258-205ENST00000540434 TMEM39BQ9GZU3 492 aa13.97□□□□□ -0.17
TMEM258-205ENST00000540434 ABCF2Q9UG63 623 aa13.97□□□□□ -0.17
TMEM258-205ENST00000540434 MYH2Q9UKX2 1941 aa13.97□□□□□ -0.17
TMEM258-205ENST00000540434 DOCK3Q8IZD9 2030 aa13.97□□□□□ -0.17
TMEM258-205ENST00000540434 PDS5AQ29RF7 1337 aaKnown RBP13.96□□□□□ -0.17
TMEM258-205ENST00000540434 ADGRA2Q96PE1 1338 aa13.96□□□□□ -0.17
TMEM258-205ENST00000540434 TCP10L2B9ZVM9 353 aa13.96□□□□□ -0.17
TMEM258-205ENST00000540434 IRF6O14896 467 aa13.96□□□□□ -0.17
TMEM258-205ENST00000540434 LDHBP07195 334 aaKnown RBP13.96□□□□□ -0.17
TMEM258-205ENST00000540434 HOXD10P28358 340 aa13.96□□□□□ -0.17
TMEM258-205ENST00000540434 HDLBPQ00341 1268 aaKnown RBP13.96□□□□□ -0.17
TMEM258-205ENST00000540434 MECOMQ03112 1051 aa13.96□□□□□ -0.17
TMEM258-205ENST00000540434 HSP90AB4PQ58FF6 505 aa13.96□□□□□ -0.17
TMEM258-205ENST00000540434 HHIPL2Q6UWX4 724 aa13.96□□□□□ -0.17
TMEM258-205ENST00000540434 OTUD7AQ8TE49 926 aaPredicted RBP13.96□□□□□ -0.17
TMEM258-205ENST00000540434 TEKT1Q969V4 418 aa13.96□□□□□ -0.17
TMEM258-205ENST00000540434 EDC3Q96F86 508 aaKnown RBP13.96□□□□□ -0.17
TMEM258-205ENST00000540434 ZNF512BQ96KM6 892 aaPredicted RBP13.96□□□□□ -0.17
TMEM258-205ENST00000540434 MRIQ9BWK5 157 aa13.96□□□□□ -0.17
TMEM258-205ENST00000540434 SUGT1Q9Y2Z0 365 aa13.96□□□□□ -0.17
TMEM258-205ENST00000540434 CSADQ9Y600 493 aa13.96□□□□□ -0.17
TMEM258-205ENST00000540434 WDHD1O75717 1129 aaPredicted RBP13.95□□□□□ -0.18
TMEM258-205ENST00000540434 UQCRFS1P1P0C7P4 283 aa13.95□□□□□ -0.18
TMEM258-205ENST00000540434 CCDC158Q5M9N0 1113 aa13.95□□□□□ -0.18
TMEM258-205ENST00000540434 CDC42EP5Q6NZY7 148 aa13.95□□□□□ -0.18
TMEM258-205ENST00000540434 ADGRA1Q86SQ6 560 aa13.95□□□□□ -0.18
TMEM258-205ENST00000540434 ERO1BQ86YB8 467 aa13.95□□□□□ -0.18
TMEM258-205ENST00000540434 ZFPM1Q8IX07 1006 aa13.95□□□□□ -0.18
TMEM258-205ENST00000540434 ZKSCAN4Q969J2 545 aaPredicted RBP13.95□□□□□ -0.18
TMEM258-205ENST00000540434 NSUN4Q96CB9 384 aaKnown RBP13.95□□□□□ -0.18
TMEM258-205ENST00000540434 UBE2OQ9C0C9 1292 aaKnown RBP13.95□□□□□ -0.18
TMEM258-205ENST00000540434 MUC3AQ02505 3323 aa13.94□□□□□ -0.18
TMEM258-205ENST00000540434 CHGBP05060 677 aa13.94□□□□□ -0.18
TMEM258-205ENST00000540434 INHAP05111 366 aa13.94□□□□□ -0.18
TMEM258-205ENST00000540434 SLURP2P0DP57 97 aa13.94□□□□□ -0.18
TMEM258-205ENST00000540434 NFIAQ12857 509 aa13.94□□□□□ -0.18
TMEM258-205ENST00000540434 SNAPC2Q13487 334 aa13.94□□□□□ -0.18
TMEM258-205ENST00000540434 TSHZ3Q63HK5 1081 aa13.94□□□□□ -0.18
TMEM258-205ENST00000540434 LRRCC1Q9C099 1032 aa13.94□□□□□ -0.18
TMEM258-205ENST00000540434 GAKO14976 1311 aa13.93□□□□□ -0.18
TMEM258-205ENST00000540434 POTEB2H3BUK9 544 aa13.93□□□□□ -0.18
TMEM258-205ENST00000540434 ADCY3O60266 1144 aa13.93□□□□□ -0.18
TMEM258-205ENST00000540434 PPIL2Q13356 520 aa13.93□□□□□ -0.18
TMEM258-205ENST00000540434 SLFNL1Q499Z3 407 aa13.93□□□□□ -0.18
TMEM258-205ENST00000540434 ERICH6Q7L0X2 663 aa13.93□□□□□ -0.18
TMEM258-205ENST00000540434 CLASRPQ8N2M8 674 aaKnown RBP13.93□□□□□ -0.18
TMEM258-205ENST00000540434 FAM198AQ9UFP1 575 aa13.93□□□□□ -0.18
TMEM258-205ENST00000540434 PDHXO00330 501 aa13.92□□□□□ -0.18
TMEM258-205ENST00000540434 IFIT2P09913 472 aaKnown RBP13.92□□□□□ -0.18
TMEM258-205ENST00000540434 RHBDL3P58872 404 aa13.92□□□□□ -0.18
TMEM258-205ENST00000540434 MOGSQ13724 837 aa13.92□□□□□ -0.18
TMEM258-205ENST00000540434 NECAB2Q7Z6G3 386 aa13.92□□□□□ -0.18
TMEM258-205ENST00000540434 SLAIN1Q8ND83 568 aa13.92□□□□□ -0.18
TMEM258-205ENST00000540434 FAM163AQ96GL9 167 aaPredicted RBP13.92□□□□□ -0.18
TMEM258-205ENST00000540434 USP40Q9NVE5 1235 aa13.92□□□□□ -0.18
TMEM258-205ENST00000540434 RAI14Q9P0K7 980 aa13.92□□□□□ -0.18
TMEM258-205ENST00000540434 TTC28Q96AY4 2481 aa13.91□□□□□ -0.18
TMEM258-205ENST00000540434 TNNI2P48788 182 aa13.91□□□□□ -0.18
TMEM258-205ENST00000540434 HDAC1Q13547 482 aaPredicted RBP13.91□□□□□ -0.18
TMEM258-205ENST00000540434 ANKRD23Q86SG2 305 aa13.91□□□□□ -0.18
TMEM258-205ENST00000540434 DZIP1Q86YF9 867 aaKnown RBP13.91□□□□□ -0.18
TMEM258-205ENST00000540434 WRNIP1Q96S55 665 aa13.91□□□□□ -0.18
TMEM258-205ENST00000540434 CRISPLD2Q9H0B8 497 aa13.91□□□□□ -0.18
TMEM258-205ENST00000540434 BOLA2Q9H3K6 86 aa13.91□□□□□ -0.18
TMEM258-205ENST00000540434 DDX4Q9NQI0 724 aaKnown RBP13.91□□□□□ -0.18
TMEM258-205ENST00000540434 MROH7-TTC4A0A0A0MT08 1334 aa13.9□□□□□ -0.18
TMEM258-205ENST00000540434 MAST3O60307 1309 aa13.9□□□□□ -0.18
TMEM258-205ENST00000540434 DOCK2Q92608 1830 aa13.9□□□□□ -0.18
TMEM258-205ENST00000540434 GPR75-ASB3A0A0A6YYF3 556 aa13.9□□□□□ -0.18
TMEM258-205ENST00000540434 CYP2C8P10632 490 aa13.9□□□□□ -0.18
TMEM258-205ENST00000540434 BCRP11274 1271 aa13.9□□□□□ -0.18
TMEM258-205ENST00000540434 BTDP43251 543 aa13.9□□□□□ -0.18
TMEM258-205ENST00000540434 FLT3LGP49771 235 aa13.9□□□□□ -0.18
TMEM258-205ENST00000540434 FCGRTP55899 365 aa13.9□□□□□ -0.18
TMEM258-205ENST00000540434 MDM2Q00987 491 aaPredicted RBP13.9□□□□□ -0.18
TMEM258-205ENST00000540434 PPATQ06203 517 aa13.9□□□□□ -0.18
TMEM258-205ENST00000540434 TCP10Q12799 353 aa13.9□□□□□ -0.18
TMEM258-205ENST00000540434 SPTY2D1Q68D10 685 aaPredicted RBP13.9□□□□□ -0.18
TMEM258-205ENST00000540434 SH3BP5LQ7L8J4 393 aa13.9□□□□□ -0.18
TMEM258-205ENST00000540434 ZGPATQ8N5A5 531 aaKnown RBP13.9□□□□□ -0.18
TMEM258-205ENST00000540434 PAK6Q9NQU5 681 aaPredicted RBP13.9□□□□□ -0.18
TMEM258-205ENST00000540434 LRP2BPQ9P2M1 347 aa13.9□□□□□ -0.18
TMEM258-205ENST00000540434 TAOK2Q9UL54 1235 aa13.9□□□□□ -0.18
TMEM258-205ENST00000540434 SALL3Q9BXA9 1300 aa13.9□□□□□ -0.19
TMEM258-205ENST00000540434 RFX7Q2KHR2 1363 aa13.89□□□□□ -0.19
TMEM258-205ENST00000540434 ATP5JP18859 108 aa13.89□□□□□ -0.19
TMEM258-205ENST00000540434 PLA2G5P39877 138 aa13.89□□□□□ -0.19
TMEM258-205ENST00000540434 DYNLL1P63167 89 aaKnown RBP13.89□□□□□ -0.19
TMEM258-205ENST00000540434 MAFAQ8NHW3 353 aaPredicted RBP13.89□□□□□ -0.19
TMEM258-205ENST00000540434 DNAJC2Q99543 621 aaKnown RBP13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms