RNA–Protein interactions for RNA: ENST00000540017.6

SNRPA1-203, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-203ENST00000540017 TESPA1A2RU30 521 aaPredicted RBP22.12■■□□□ 1.13
SNRPA1-203ENST00000540017 IRF6O14896 467 aa22.12■■□□□ 1.13
SNRPA1-203ENST00000540017 ERC2O15083 957 aa22.12■■□□□ 1.13
SNRPA1-203ENST00000540017 GLRX3O76003 335 aaKnown RBP22.12■■□□□ 1.13
SNRPA1-203ENST00000540017 NUCB1Q02818 461 aa22.12■■□□□ 1.13
SNRPA1-203ENST00000540017 IFNL1Q8IU54 200 aa22.12■■□□□ 1.13
SNRPA1-203ENST00000540017 DNAJC18Q9H819 358 aa22.12■■□□□ 1.13
SNRPA1-203ENST00000540017 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.12■■□□□ 1.13
SNRPA1-203ENST00000540017 PI4KBQ9UBF8 816 aa22.12■■□□□ 1.13
SNRPA1-203ENST00000540017 MBD4O95243 580 aa22.11■■□□□ 1.13
SNRPA1-203ENST00000540017 PDE1AP54750 535 aa22.11■■□□□ 1.13
SNRPA1-203ENST00000540017 INHBEP58166 350 aa22.11■■□□□ 1.13
SNRPA1-203ENST00000540017 PPIL2Q13356 520 aa22.11■■□□□ 1.13
SNRPA1-203ENST00000540017 METTL16Q86W50 562 aaKnown RBP22.11■■□□□ 1.13
SNRPA1-203ENST00000540017 SCYL3Q8IZE3 742 aa22.11■■□□□ 1.13
SNRPA1-203ENST00000540017 BRI3BPQ8WY22 251 aa22.11■■□□□ 1.13
SNRPA1-203ENST00000540017 PUS7LQ9H0K6 701 aaKnown RBP22.11■■□□□ 1.13
SNRPA1-203ENST00000540017 R3HDMLQ9H3Y0 253 aa22.11■■□□□ 1.13
SNRPA1-203ENST00000540017 MYH1P12882 1939 aa22.1■■□□□ 1.13
SNRPA1-203ENST00000540017 PRKAB2O43741 272 aa22.1■■□□□ 1.13
SNRPA1-203ENST00000540017 CTNND1O60716 968 aaKnown RBP22.1■■□□□ 1.13
SNRPA1-203ENST00000540017 TBC1D8O95759 1140 aa22.1■■□□□ 1.13
SNRPA1-203ENST00000540017 PPATQ06203 517 aa22.1■■□□□ 1.13
SNRPA1-203ENST00000540017 CHD1LQ86WJ1 897 aa22.1■■□□□ 1.13
SNRPA1-203ENST00000540017 SDR42E1Q8WUS8 393 aa22.1■■□□□ 1.13
SNRPA1-203ENST00000540017 CRNKL1Q9BZJ0 848 aaKnown RBP22.1■■□□□ 1.13
SNRPA1-203ENST00000540017 HERC5Q9UII4 1024 aaKnown RBP22.1■■□□□ 1.13
SNRPA1-203ENST00000540017 DDX60LQ5H9U9 1706 aaKnown RBP22.09■■□□□ 1.13
SNRPA1-203ENST00000540017 PTPRAP18433 802 aa22.09■■□□□ 1.13
SNRPA1-203ENST00000540017 GTF2A2P52657 109 aa22.09■■□□□ 1.13
SNRPA1-203ENST00000540017 EVX2Q03828 476 aa22.09■■□□□ 1.13
SNRPA1-203ENST00000540017 ZSCAN25Q6NSZ9 544 aa22.09■■□□□ 1.13
SNRPA1-203ENST00000540017 CCDC84Q86UT8 332 aaPredicted RBP22.09■■□□□ 1.13
SNRPA1-203ENST00000540017 CCL15-CCL14A0A0B4J2E2 113 aa22.08■■□□□ 1.13
SNRPA1-203ENST00000540017 JAG1P78504 1218 aa22.08■■□□□ 1.13
SNRPA1-203ENST00000540017 CCL15Q16663 113 aa22.08■■□□□ 1.13
SNRPA1-203ENST00000540017 FOXP4Q8IVH2 680 aaPredicted RBP22.08■■□□□ 1.13
SNRPA1-203ENST00000540017 OSBP2Q969R2 916 aa22.08■■□□□ 1.13
SNRPA1-203ENST00000540017 DCP1AQ9NPI6 582 aaPredicted RBP22.08■■□□□ 1.13
SNRPA1-203ENST00000540017 DOCK1Q14185 1865 aa22.08■■□□□ 1.13
SNRPA1-203ENST00000540017 RNF113AO15541 343 aaKnown RBP22.07■■□□□ 1.12
SNRPA1-203ENST00000540017 PLCD1P51178 756 aa22.07■■□□□ 1.12
SNRPA1-203ENST00000540017 SHROOM1Q2M3G4 852 aaPredicted RBP22.07■■□□□ 1.12
SNRPA1-203ENST00000540017 KCNH4Q9UQ05 1017 aa22.07■■□□□ 1.12
SNRPA1-203ENST00000540017 ZHX2Q9Y6X8 837 aa22.07■■□□□ 1.12
SNRPA1-203ENST00000540017 NAV1Q8NEY1 1877 aa22.07■■□□□ 1.12
SNRPA1-203ENST00000540017 CASP8AP2Q9UKL3 1982 aa22.07■■□□□ 1.12
SNRPA1-203ENST00000540017 HLA-DOAP06340 250 aa22.06■■□□□ 1.12
SNRPA1-203ENST00000540017 CAP2P40123 477 aa22.06■■□□□ 1.12
SNRPA1-203ENST00000540017 SNAPC2Q13487 334 aa22.06■■□□□ 1.12
SNRPA1-203ENST00000540017 PLEKHM2Q8IWE5 1019 aa22.06■■□□□ 1.12
SNRPA1-203ENST00000540017 FAM43AQ8N2R8 423 aa22.06■■□□□ 1.12
SNRPA1-203ENST00000540017 CRACR2BQ8N4Y2 399 aaPredicted RBP22.06■■□□□ 1.12
SNRPA1-203ENST00000540017 PICK1Q9NRD5 415 aa22.06■■□□□ 1.12
SNRPA1-203ENST00000540017 PHIPQ8WWQ0 1821 aa22.06■■□□□ 1.12
SNRPA1-203ENST00000540017 CETPP11597 493 aa22.05■■□□□ 1.12
SNRPA1-203ENST00000540017 MOGSQ13724 837 aa22.05■■□□□ 1.12
SNRPA1-203ENST00000540017 APPBP2Q92624 585 aa22.05■■□□□ 1.12
SNRPA1-203ENST00000540017 CFHR5Q9BXR6 569 aa22.05■■□□□ 1.12
SNRPA1-203ENST00000540017 MCM9Q9NXL9 1143 aa22.05■■□□□ 1.12
SNRPA1-203ENST00000540017 AFG3L2Q9Y4W6 797 aa22.05■■□□□ 1.12
SNRPA1-203ENST00000540017 ATAD5Q96QE3 1844 aa22.04■■□□□ 1.12
SNRPA1-203ENST00000540017 BTBD19C9JJ37 291 aa22.04■■□□□ 1.12
SNRPA1-203ENST00000540017 ALDH1A1P00352 501 aa22.04■■□□□ 1.12
SNRPA1-203ENST00000540017 ZFYP08048 801 aaPredicted RBP22.04■■□□□ 1.12
SNRPA1-203ENST00000540017 CYP2D6P10635 497 aa22.04■■□□□ 1.12
SNRPA1-203ENST00000540017 STRBPQ96SI9 672 aaKnown RBP22.04■■□□□ 1.12
SNRPA1-203ENST00000540017 SEC62Q99442 399 aaKnown RBP22.04■■□□□ 1.12
SNRPA1-203ENST00000540017 FSD1Q9BTV5 496 aa22.04■■□□□ 1.12
SNRPA1-203ENST00000540017 EHD4Q9H223 541 aa22.04■■□□□ 1.12
SNRPA1-203ENST00000540017 SMIM22K7EJ46 135 aa22.03■■□□□ 1.12
SNRPA1-203ENST00000540017 M0R2C6 588 aa22.03■■□□□ 1.12
SNRPA1-203ENST00000540017 POLR3DP05423 398 aaPredicted RBP22.03■■□□□ 1.12
SNRPA1-203ENST00000540017 TTC6Q86TZ1 520 aa22.03■■□□□ 1.12
SNRPA1-203ENST00000540017 ATP8A2Q9NTI2 1148 aa22.03■■□□□ 1.12
SNRPA1-203ENST00000540017 SERPINB13Q9UIV8 391 aa22.03■■□□□ 1.12
SNRPA1-203ENST00000540017 SLC4A4Q9Y6R1 1079 aa22.03■■□□□ 1.12
SNRPA1-203ENST00000540017 CXCL11O14625 94 aa22.02■■□□□ 1.12
SNRPA1-203ENST00000540017 GDF11O95390 407 aa22.02■■□□□ 1.12
SNRPA1-203ENST00000540017 CRHR2Q13324 411 aa22.02■■□□□ 1.12
SNRPA1-203ENST00000540017 OTUD7BQ6GQQ9 843 aa22.02■■□□□ 1.12
SNRPA1-203ENST00000540017 TRIM34Q9BYJ4 488 aa22.02■■□□□ 1.12
SNRPA1-203ENST00000540017 BAZ2AQ9UIF9 1905 aaKnown RBP22.02■■□□□ 1.11
SNRPA1-203ENST00000540017 CYP2D7A0A087X1C5 515 aa22.01■■□□□ 1.11
SNRPA1-203ENST00000540017 GPR25O00155 361 aa22.01■■□□□ 1.11
SNRPA1-203ENST00000540017 PDE4AP27815 886 aa22.01■■□□□ 1.11
SNRPA1-203ENST00000540017 GABPAQ06546 454 aa22.01■■□□□ 1.11
SNRPA1-203ENST00000540017 ZMYM1Q5SVZ6 1142 aa22.01■■□□□ 1.11
SNRPA1-203ENST00000540017 TATDN1Q6P1N9 297 aa22.01■■□□□ 1.11
SNRPA1-203ENST00000540017 TNS4Q8IZW8 715 aa22.01■■□□□ 1.11
SNRPA1-203ENST00000540017 ZNF296Q8WUU4 475 aaPredicted RBP22.01■■□□□ 1.11
SNRPA1-203ENST00000540017 EVI5LQ96CN4 794 aa22.01■■□□□ 1.11
SNRPA1-203ENST00000540017 OSBPL3Q9H4L5 887 aa22.01■■□□□ 1.11
SNRPA1-203ENST00000540017 A0A0G2JLL6 359 aaPredicted RBP22■■□□□ 1.11
SNRPA1-203ENST00000540017 TRIM75PA6NK02 468 aa22■■□□□ 1.11
SNRPA1-203ENST00000540017 GSG1L2A8MUP6 293 aa22■■□□□ 1.11
SNRPA1-203ENST00000540017 GPAA1O43292 621 aa22■■□□□ 1.11
SNRPA1-203ENST00000540017 SHMT1P34896 483 aa22■■□□□ 1.11
SNRPA1-203ENST00000540017 GPAT2Q6NUI2 795 aa22■■□□□ 1.11
SNRPA1-203ENST00000540017 PRRT2Q7Z6L0 340 aaPredicted RBP22■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms