RNA–Protein interactions for RNA: ENST00000539921.5

SNHG1-211, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 1,071 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-211ENST00000539921 F8VZ95 297 aa6.92□□□□□ -1.3
SNHG1-211ENST00000539921 MYO1FO00160 1098 aa6.92□□□□□ -1.3
SNHG1-211ENST00000539921 NDUFAB1O14561 156 aa6.92□□□□□ -1.3
SNHG1-211ENST00000539921 WDHD1O75717 1129 aaPredicted RBP6.92□□□□□ -1.3
SNHG1-211ENST00000539921 ECEL1O95672 775 aa6.92□□□□□ -1.3
SNHG1-211ENST00000539921 CCDC166P0CW27 439 aa6.92□□□□□ -1.3
SNHG1-211ENST00000539921 ZNF24P17028 368 aa6.92□□□□□ -1.3
SNHG1-211ENST00000539921 HSPA4P34932 840 aa6.92□□□□□ -1.3
SNHG1-211ENST00000539921 AKAP17AQ02040 695 aaKnown RBP6.92□□□□□ -1.3
SNHG1-211ENST00000539921 TTC6Q86TZ1 520 aa6.92□□□□□ -1.3
SNHG1-211ENST00000539921 ARHGEF25Q86VW2 580 aa6.92□□□□□ -1.3
SNHG1-211ENST00000539921 PROCA1Q8NCQ7 364 aaPredicted RBP6.92□□□□□ -1.3
SNHG1-211ENST00000539921 RASSF8Q8NHQ8 419 aa6.92□□□□□ -1.3
SNHG1-211ENST00000539921 ERMNQ8TAM6 284 aa6.92□□□□□ -1.3
SNHG1-211ENST00000539921 CXorf38Q8TB03 319 aa6.92□□□□□ -1.3
SNHG1-211ENST00000539921 ZCRB1Q8TBF4 217 aaKnown RBP6.92□□□□□ -1.3
SNHG1-211ENST00000539921 TBC1D31Q96DN5 1066 aa6.92□□□□□ -1.3
SNHG1-211ENST00000539921 IWS1Q96ST2 819 aa6.92□□□□□ -1.3
SNHG1-211ENST00000539921 ARPC5LQ9BPX5 153 aa6.92□□□□□ -1.3
SNHG1-211ENST00000539921 API5Q9BZZ5 524 aaKnown RBP6.92□□□□□ -1.3
SNHG1-211ENST00000539921 TRIM4Q9C037 500 aa6.92□□□□□ -1.3
SNHG1-211ENST00000539921 DNAJC25Q9H1X3 360 aa6.92□□□□□ -1.3
SNHG1-211ENST00000539921 KAT14Q9H8E8 782 aa6.92□□□□□ -1.3
SNHG1-211ENST00000539921 ZNF510Q9Y2H8 683 aa6.92□□□□□ -1.3
SNHG1-211ENST00000539921 PPP2R2CQ9Y2T4 447 aa6.92□□□□□ -1.3
SNHG1-211ENST00000539921 TMEM98Q9Y2Y6 226 aa6.92□□□□□ -1.3
SNHG1-211ENST00000539921 ASB3Q9Y575 518 aa6.92□□□□□ -1.3
SNHG1-211ENST00000539921 USP16Q9Y5T5 823 aa6.92□□□□□ -1.3
SNHG1-211ENST00000539921 NCKAP5LQ9HCH0 1330 aa6.92□□□□□ -1.3
SNHG1-211ENST00000539921 NPHP4O75161 1426 aaPredicted RBP6.92□□□□□ -1.3
SNHG1-211ENST00000539921 ATP10DQ9P241 1426 aa6.92□□□□□ -1.3
SNHG1-211ENST00000539921 GLI2P10070 1586 aa6.91□□□□□ -1.3
SNHG1-211ENST00000539921 SAMD9LQ8IVG5 1584 aa6.91□□□□□ -1.3
SNHG1-211ENST00000539921 SPHKAPQ2M3C7 1700 aa6.91□□□□□ -1.3
SNHG1-211ENST00000539921 CDC42BPBQ9Y5S2 1711 aa6.91□□□□□ -1.3
SNHG1-211ENST00000539921 CTAGE15A4D2H0 777 aa6.91□□□□□ -1.3
SNHG1-211ENST00000539921 BIRC5O15392 142 aa6.91□□□□□ -1.3
SNHG1-211ENST00000539921 PRPF3O43395 683 aaKnown RBP6.91□□□□□ -1.3
SNHG1-211ENST00000539921 BUB1BO60566 1050 aaPredicted RBP6.91□□□□□ -1.3
SNHG1-211ENST00000539921 GSTA2P09210 222 aa6.91□□□□□ -1.3
SNHG1-211ENST00000539921 VIL1P09327 827 aaKnown RBP6.91□□□□□ -1.3
SNHG1-211ENST00000539921 CTAGE8P0CG41 777 aa6.91□□□□□ -1.3
SNHG1-211ENST00000539921 ALADP13716 330 aa6.91□□□□□ -1.3
SNHG1-211ENST00000539921 PHEXP78562 749 aa6.91□□□□□ -1.3
SNHG1-211ENST00000539921 ITIH3Q06033 890 aa6.91□□□□□ -1.3
SNHG1-211ENST00000539921 NNTQ13423 1086 aa6.91□□□□□ -1.3
SNHG1-211ENST00000539921 PRPF4BQ13523 1007 aaKnown RBP6.91□□□□□ -1.3
SNHG1-211ENST00000539921 STIM1Q13586 685 aa6.91□□□□□ -1.3
SNHG1-211ENST00000539921 CLPPQ16740 277 aaPredicted RBP6.91□□□□□ -1.3
SNHG1-211ENST00000539921 PABPC1LQ4VXU2 614 aaKnown RBP6.91□□□□□ -1.3
SNHG1-211ENST00000539921 CCDC92Q53HC0 331 aaPredicted RBP6.91□□□□□ -1.3
SNHG1-211ENST00000539921 ALS2CLQ60I27 953 aa6.91□□□□□ -1.3
SNHG1-211ENST00000539921 RSPH3Q86UC2 560 aa6.91□□□□□ -1.3
SNHG1-211ENST00000539921 CTAGE6Q86UF2 777 aa6.91□□□□□ -1.3
SNHG1-211ENST00000539921 CEP57Q86XR8 500 aa6.91□□□□□ -1.3
SNHG1-211ENST00000539921 DHX40Q8IX18 779 aaKnown RBP6.91□□□□□ -1.3
SNHG1-211ENST00000539921 CTAGE4Q8IX94 777 aa6.91□□□□□ -1.3
SNHG1-211ENST00000539921 ARHGAP18Q8N392 663 aa6.91□□□□□ -1.3
SNHG1-211ENST00000539921 KLHDC4Q8TBB5 520 aa6.91□□□□□ -1.3
SNHG1-211ENST00000539921 IRGQQ8WZA9 623 aa6.91□□□□□ -1.3
SNHG1-211ENST00000539921 FMNL2Q96PY5 1086 aa6.91□□□□□ -1.3
SNHG1-211ENST00000539921 LRRCC1Q9C099 1032 aa6.91□□□□□ -1.3
SNHG1-211ENST00000539921 EPN3Q9H201 632 aa6.91□□□□□ -1.3
SNHG1-211ENST00000539921 ALDH8A1Q9H2A2 487 aaPredicted RBP6.91□□□□□ -1.3
SNHG1-211ENST00000539921 GOLPH3LQ9H4A5 285 aa6.91□□□□□ -1.3
SNHG1-211ENST00000539921 QPCTLQ9NXS2 382 aa6.91□□□□□ -1.3
SNHG1-211ENST00000539921 SPATA7Q9P0W8 599 aa6.91□□□□□ -1.3
SNHG1-211ENST00000539921 ZFATQ9P243 1243 aa6.91□□□□□ -1.3
SNHG1-211ENST00000539921 TPX2Q9ULW0 747 aaKnown RBP6.91□□□□□ -1.3
SNHG1-211ENST00000539921 NOB1Q9ULX3 412 aaKnown RBP6.91□□□□□ -1.3
SNHG1-211ENST00000539921 ATP1B4Q9UN42 357 aaPredicted RBP6.91□□□□□ -1.3
SNHG1-211ENST00000539921 THRAP3Q9Y2W1 955 aaKnown RBP6.91□□□□□ -1.3
SNHG1-211ENST00000539921 TMED5Q9Y3A6 229 aa6.91□□□□□ -1.3
SNHG1-211ENST00000539921 DAAM1Q9Y4D1 1078 aa6.91□□□□□ -1.3
SNHG1-211ENST00000539921 SLC4A7Q9Y6M7 1214 aa6.91□□□□□ -1.3
SNHG1-211ENST00000539921 STXBP3O00186 592 aa6.9□□□□□ -1.3
SNHG1-211ENST00000539921 SMAPO00193 183 aa6.9□□□□□ -1.3
SNHG1-211ENST00000539921 IPO5O00410 1097 aaKnown RBP6.9□□□□□ -1.3
SNHG1-211ENST00000539921 N4BP1O75113 896 aaKnown RBP6.9□□□□□ -1.3
SNHG1-211ENST00000539921 HMMRO75330 724 aa6.9□□□□□ -1.3
SNHG1-211ENST00000539921 TMCC1O94876 653 aa6.9□□□□□ -1.3
SNHG1-211ENST00000539921 FAM107AO95990 144 aa6.9□□□□□ -1.3
SNHG1-211ENST00000539921 ALDH3A1P30838 453 aa6.9□□□□□ -1.3
SNHG1-211ENST00000539921 MRPS25P82663 173 aaKnown RBP6.9□□□□□ -1.3
SNHG1-211ENST00000539921 DNM1Q05193 864 aaKnown RBP6.9□□□□□ -1.3
SNHG1-211ENST00000539921 KIF5AQ12840 1032 aa6.9□□□□□ -1.3
SNHG1-211ENST00000539921 MKRN3Q13064 507 aaKnown RBP6.9□□□□□ -1.3
SNHG1-211ENST00000539921 IFT88Q13099 833 aa6.9□□□□□ -1.3
SNHG1-211ENST00000539921 MYBPC3Q14896 1274 aa6.9□□□□□ -1.3
SNHG1-211ENST00000539921 KDM7AQ6ZMT4 941 aa6.9□□□□□ -1.3
SNHG1-211ENST00000539921 CCDC73Q6ZRK6 1079 aa6.9□□□□□ -1.3
SNHG1-211ENST00000539921 CCDC121Q6ZUS5 278 aa6.9□□□□□ -1.3
SNHG1-211ENST00000539921 CCDC83Q8IWF9 413 aa6.9□□□□□ -1.3
SNHG1-211ENST00000539921 CACTIN-AS1Q8N1I8 211 aa6.9□□□□□ -1.3
SNHG1-211ENST00000539921 ARFGAP2Q8N6H7 521 aa6.9□□□□□ -1.3
SNHG1-211ENST00000539921 CCDC148Q8NFR7 591 aa6.9□□□□□ -1.3
SNHG1-211ENST00000539921 RSPH1Q8WYR4 309 aa6.9□□□□□ -1.3
SNHG1-211ENST00000539921 MAML3Q96JK9 1138 aa6.9□□□□□ -1.3
SNHG1-211ENST00000539921 CHAMP1Q96JM3 812 aa6.9□□□□□ -1.3
SNHG1-211ENST00000539921 GDAP1L1Q96MZ0 367 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms