RNA–Protein interactions for RNA: ENST00000539712.5

DDB1-215, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,020 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-215ENST00000539712 SIPA1L1O43166 1804 aa20.48■□□□□ 0.87
DDB1-215ENST00000539712 PHIPQ8WWQ0 1821 aa20.48■□□□□ 0.87
DDB1-215ENST00000539712 CDK5RAP2Q96SN8 1893 aa20.47■□□□□ 0.87
DDB1-215ENST00000539712 IDH1O75874 414 aaKnown RBP20.47■□□□□ 0.87
DDB1-215ENST00000539712 PLCG2P16885 1265 aa20.47■□□□□ 0.87
DDB1-215ENST00000539712 METTL16Q86W50 562 aaKnown RBP20.47■□□□□ 0.87
DDB1-215ENST00000539712 MAPKAPK5Q8IW41 473 aa20.47■□□□□ 0.87
DDB1-215ENST00000539712 CLASRPQ8N2M8 674 aaKnown RBP20.47■□□□□ 0.87
DDB1-215ENST00000539712 CHMP4BQ9H444 224 aaKnown RBP20.47■□□□□ 0.87
DDB1-215ENST00000539712 FLT1P17948 1338 aa20.47■□□□□ 0.87
DDB1-215ENST00000539712 DOCK1Q14185 1865 aa20.46■□□□□ 0.87
DDB1-215ENST00000539712 RAB11FIP3O75154 756 aa20.46■□□□□ 0.87
DDB1-215ENST00000539712 MAGEB6Q8N7X4 407 aa20.46■□□□□ 0.87
DDB1-215ENST00000539712 NOL10Q9BSC4 688 aaKnown RBP20.46■□□□□ 0.87
DDB1-215ENST00000539712 ARHGAP39Q9C0H5 1083 aa20.46■□□□□ 0.87
DDB1-215ENST00000539712 DNAJC18Q9H819 358 aa20.46■□□□□ 0.87
DDB1-215ENST00000539712 PI4KBQ9UBF8 816 aa20.46■□□□□ 0.87
DDB1-215ENST00000539712 CTGFP29279 349 aa20.45■□□□□ 0.86
DDB1-215ENST00000539712 JAG1P78504 1218 aa20.45■□□□□ 0.86
DDB1-215ENST00000539712 MIGA1Q8NAN2 632 aa20.45■□□□□ 0.86
DDB1-215ENST00000539712 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.45■□□□□ 0.86
DDB1-215ENST00000539712 DHX36Q9H2U1 1008 aaKnown RBP20.45■□□□□ 0.86
DDB1-215ENST00000539712 HERC5Q9UII4 1024 aaKnown RBP20.45■□□□□ 0.86
DDB1-215ENST00000539712 PALD1Q9ULE6 856 aa20.45■□□□□ 0.86
DDB1-215ENST00000539712 FOCADQ5VW36 1801 aa20.45■□□□□ 0.86
DDB1-215ENST00000539712 ZSWIM8A7E2V4 1837 aa20.44■□□□□ 0.86
DDB1-215ENST00000539712 CAP2P40123 477 aa20.44■□□□□ 0.86
DDB1-215ENST00000539712 LACTBP83111 547 aaPredicted RBP20.44■□□□□ 0.86
DDB1-215ENST00000539712 CPA4Q9UI42 421 aa20.44■□□□□ 0.86
DDB1-215ENST00000539712 PTPRFP10586 1907 aa20.44■□□□□ 0.86
DDB1-215ENST00000539712 TRIM75PA6NK02 468 aa20.43■□□□□ 0.86
DDB1-215ENST00000539712 IFIT2P09913 472 aaKnown RBP20.43■□□□□ 0.86
DDB1-215ENST00000539712 CYP2C8P10632 490 aa20.43■□□□□ 0.86
DDB1-215ENST00000539712 MAP3K12Q12852 859 aa20.43■□□□□ 0.86
DDB1-215ENST00000539712 RIOK1Q9BRS2 568 aaKnown RBP20.43■□□□□ 0.86
DDB1-215ENST00000539712 SHROOM1Q2M3G4 852 aaPredicted RBP20.42■□□□□ 0.86
DDB1-215ENST00000539712 TMED8Q6PL24 325 aaPredicted RBP20.42■□□□□ 0.86
DDB1-215ENST00000539712 FASTKD5Q7L8L6 764 aaKnown RBP20.42■□□□□ 0.86
DDB1-215ENST00000539712 FOXP4Q8IVH2 680 aaPredicted RBP20.42■□□□□ 0.86
DDB1-215ENST00000539712 ARMC5Q96C12 935 aa20.42■□□□□ 0.86
DDB1-215ENST00000539712 EDC3Q96F86 508 aaKnown RBP20.42■□□□□ 0.86
DDB1-215ENST00000539712 SAP30BPQ9UHR5 308 aaKnown RBP20.42■□□□□ 0.86
DDB1-215ENST00000539712 TCRBV5S4A2TA0A5A2 114 aa20.41■□□□□ 0.86
DDB1-215ENST00000539712 BCRP11274 1271 aa20.41■□□□□ 0.86
DDB1-215ENST00000539712 SPP2Q13103 211 aa20.41■□□□□ 0.86
DDB1-215ENST00000539712 GOLIM4O00461 696 aa20.4■□□□□ 0.86
DDB1-215ENST00000539712 PDE6AP16499 860 aa20.4■□□□□ 0.86
DDB1-215ENST00000539712 ATP5JP18859 108 aa20.4■□□□□ 0.86
DDB1-215ENST00000539712 GADL1Q6ZQY3 521 aa20.4■□□□□ 0.86
DDB1-215ENST00000539712 SLC45A1Q9Y2W3 748 aa20.4■□□□□ 0.86
DDB1-215ENST00000539712 PTCH2Q9Y6C5 1203 aa20.4■□□□□ 0.86
DDB1-215ENST00000539712 SMARCA5O60264 1052 aaPredicted RBP20.39■□□□□ 0.85
DDB1-215ENST00000539712 ARHGEF6Q15052 776 aa20.39■□□□□ 0.85
DDB1-215ENST00000539712 TTF1Q15361 905 aaPredicted RBP20.39■□□□□ 0.85
DDB1-215ENST00000539712 TREML2Q5T2D2 321 aa20.39■□□□□ 0.85
DDB1-215ENST00000539712 SLC9C2Q5TAH2 1124 aa20.39■□□□□ 0.85
DDB1-215ENST00000539712 CERS3Q8IU89 383 aa20.39■□□□□ 0.85
DDB1-215ENST00000539712 ZNF280CQ8ND82 737 aa20.39■□□□□ 0.85
DDB1-215ENST00000539712 TRIM47Q96LD4 638 aa20.39■□□□□ 0.85
DDB1-215ENST00000539712 PARK7Q99497 189 aaKnown RBP20.39■□□□□ 0.85
DDB1-215ENST00000539712 DNAJC2Q99543 621 aaKnown RBP20.39■□□□□ 0.85
DDB1-215ENST00000539712 BCL11AQ9H165 835 aa20.39■□□□□ 0.85
DDB1-215ENST00000539712 KIAA0100Q14667 2235 aaKnown RBP20.39■□□□□ 0.85
DDB1-215ENST00000539712 ATAD5Q96QE3 1844 aa20.39■□□□□ 0.85
DDB1-215ENST00000539712 USP17L5A8MUK1 530 aa20.38■□□□□ 0.85
DDB1-215ENST00000539712 SLC4A8Q2Y0W8 1093 aa20.38■□□□□ 0.85
DDB1-215ENST00000539712 SLFNL1Q499Z3 407 aa20.38■□□□□ 0.85
DDB1-215ENST00000539712 WDR18Q9BV38 432 aa20.38■□□□□ 0.85
DDB1-215ENST00000539712 LRRCC1Q9C099 1032 aa20.38■□□□□ 0.85
DDB1-215ENST00000539712 BOLA2Q9H3K6 86 aa20.38■□□□□ 0.85
DDB1-215ENST00000539712 DCTPP1Q9H773 170 aa20.38■□□□□ 0.85
DDB1-215ENST00000539712 AGTPBP1Q9UPW5 1226 aa20.38■□□□□ 0.85
DDB1-215ENST00000539712 PDE4DIPQ5VU43 2346 aa20.37■□□□□ 0.85
DDB1-215ENST00000539712 ZNF532Q9HCE3 1301 aa20.37■□□□□ 0.85
DDB1-215ENST00000539712 POTEFA5A3E0 1075 aa20.37■□□□□ 0.85
DDB1-215ENST00000539712 ECM2O94769 699 aaPredicted RBP20.37■□□□□ 0.85
DDB1-215ENST00000539712 PSMC4P43686 418 aa20.37■□□□□ 0.85
DDB1-215ENST00000539712 HAUS7Q99871 368 aa20.37■□□□□ 0.85
DDB1-215ENST00000539712 PCDHB15Q9Y5E8 787 aa20.37■□□□□ 0.85
DDB1-215ENST00000539712 GNRH1P01148 92 aa20.36■□□□□ 0.85
DDB1-215ENST00000539712 CHGBP05060 677 aa20.36■□□□□ 0.85
DDB1-215ENST00000539712 USP5P45974 858 aa20.36■□□□□ 0.85
DDB1-215ENST00000539712 KIF22Q14807 665 aa20.36■□□□□ 0.85
DDB1-215ENST00000539712 SH3D19Q5HYK7 790 aa20.36■□□□□ 0.85
DDB1-215ENST00000539712 TATDN1Q6P1N9 297 aa20.36■□□□□ 0.85
DDB1-215ENST00000539712 PROCA1Q8NCQ7 364 aaPredicted RBP20.36■□□□□ 0.85
DDB1-215ENST00000539712 ZNF333Q96JL9 665 aa20.36■□□□□ 0.85
DDB1-215ENST00000539712 TBC1D2Q9BYX2 928 aa20.36■□□□□ 0.85
DDB1-215ENST00000539712 PAG1Q9NWQ8 432 aa20.36■□□□□ 0.85
DDB1-215ENST00000539712 MYH1P12882 1939 aa20.35■□□□□ 0.85
DDB1-215ENST00000539712 MAGEB6P1A0A0J9YX57 407 aa20.35■□□□□ 0.85
DDB1-215ENST00000539712 GDF11O95390 407 aa20.35■□□□□ 0.85
DDB1-215ENST00000539712 ASNSP08243 561 aa20.35■□□□□ 0.85
DDB1-215ENST00000539712 PLCD1P51178 756 aa20.35■□□□□ 0.85
DDB1-215ENST00000539712 HMGCS2P54868 508 aa20.35■□□□□ 0.85
DDB1-215ENST00000539712 EVX2Q03828 476 aa20.35■□□□□ 0.85
DDB1-215ENST00000539712 CRACR2BQ8N4Y2 399 aaPredicted RBP20.35■□□□□ 0.85
DDB1-215ENST00000539712 EHD4Q9H223 541 aa20.35■□□□□ 0.85
DDB1-215ENST00000539712 LOC285556D6RIA3 1793 aa20.34■□□□□ 0.85
DDB1-215ENST00000539712 HLA-DOAP06340 250 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms