RNA–Protein interactions for RNA: ENST00000539699.5

DDX11-215, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 2

Gene DDX11, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-215ENST00000539699 HDAC5Q9UQL6 1122 aa20.35■□□□□ 0.85
DDX11-215ENST00000539699 ALPK3Q96L96 1907 aa20.34■□□□□ 0.85
DDX11-215ENST00000539699 FAM196BA6NMK8 535 aa20.34■□□□□ 0.85
DDX11-215ENST00000539699 HMGCRP04035 888 aa20.34■□□□□ 0.85
DDX11-215ENST00000539699 GCLCP48506 637 aaPredicted RBP20.34■□□□□ 0.85
DDX11-215ENST00000539699 ERICH6Q7L0X2 663 aa20.34■□□□□ 0.85
DDX11-215ENST00000539699 ANKLE1Q8NAG6 615 aa20.34■□□□□ 0.85
DDX11-215ENST00000539699 ZNF280CQ8ND82 737 aa20.34■□□□□ 0.85
DDX11-215ENST00000539699 ZNF384Q8TF68 577 aa20.34■□□□□ 0.85
DDX11-215ENST00000539699 BMP8BP34820 402 aa20.33■□□□□ 0.85
DDX11-215ENST00000539699 XAGE2Q96GT9 111 aa20.33■□□□□ 0.85
DDX11-215ENST00000539699 GDF15Q99988 308 aa20.33■□□□□ 0.85
DDX11-215ENST00000539699 GJD2Q9UKL4 321 aa20.33■□□□□ 0.85
DDX11-215ENST00000539699 RPTORQ8N122 1335 aa20.32■□□□□ 0.84
DDX11-215ENST00000539699 A0A1B0GUL7 405 aa20.32■□□□□ 0.84
DDX11-215ENST00000539699 HMGCS2P54868 508 aa20.32■□□□□ 0.84
DDX11-215ENST00000539699 PABPC4Q13310 644 aaKnown RBP eCLIP20.32■□□□□ 0.84
DDX11-215ENST00000539699 TBC1D2Q9BYX2 928 aa20.32■□□□□ 0.84
DDX11-215ENST00000539699 AKAP2Q9Y2D5 859 aa20.32■□□□□ 0.84
DDX11-215ENST00000539699 MAP4K4O95819 1239 aaPredicted RBP20.31■□□□□ 0.84
DDX11-215ENST00000539699 MVPQ14764 893 aaKnown RBP20.31■□□□□ 0.84
DDX11-215ENST00000539699 C7orf61Q8IZ16 206 aa20.31■□□□□ 0.84
DDX11-215ENST00000539699 NBPF3Q9H094 633 aa20.31■□□□□ 0.84
DDX11-215ENST00000539699 ASCC2Q9H1I8 757 aaPredicted RBP20.31■□□□□ 0.84
DDX11-215ENST00000539699 HMX1Q9NP08 348 aaPredicted RBP20.31■□□□□ 0.84
DDX11-215ENST00000539699 NOB1Q9ULX3 412 aaKnown RBP20.31■□□□□ 0.84
DDX11-215ENST00000539699 LOC285556D6RIA3 1793 aa20.31■□□□□ 0.84
DDX11-215ENST00000539699 LDHCP07864 332 aa20.3■□□□□ 0.84
DDX11-215ENST00000539699 CAP2P40123 477 aa20.3■□□□□ 0.84
DDX11-215ENST00000539699 MNX1P50219 401 aaPredicted RBP20.3■□□□□ 0.84
DDX11-215ENST00000539699 TFCP2Q12800 502 aa20.3■□□□□ 0.84
DDX11-215ENST00000539699 TRIM32Q13049 653 aa20.3■□□□□ 0.84
DDX11-215ENST00000539699 SH3D19Q5HYK7 790 aa20.3■□□□□ 0.84
DDX11-215ENST00000539699 NSUN4Q96CB9 384 aaKnown RBP20.3■□□□□ 0.84
DDX11-215ENST00000539699 MEIS3Q99687 375 aa20.3■□□□□ 0.84
DDX11-215ENST00000539699 COL2A1P02458 1487 aaPredicted RBP20.3■□□□□ 0.84
DDX11-215ENST00000539699 USP17L5A8MUK1 530 aa20.29■□□□□ 0.84
DDX11-215ENST00000539699 GSTO1P78417 241 aa20.29■□□□□ 0.84
DDX11-215ENST00000539699 RRP1BQ14684 758 aaKnown RBP20.29■□□□□ 0.84
DDX11-215ENST00000539699 GPR153Q6NV75 609 aa20.29■□□□□ 0.84
DDX11-215ENST00000539699 CDCA7LQ96GN5 454 aa20.29■□□□□ 0.84
DDX11-215ENST00000539699 HMG20BQ9P0W2 317 aa20.29■□□□□ 0.84
DDX11-215ENST00000539699 ZMYND8Q9ULU4 1186 aaPredicted RBP20.29■□□□□ 0.84
DDX11-215ENST00000539699 PI16Q6UXB8 463 aa20.28■□□□□ 0.84
DDX11-215ENST00000539699 TBC1D9Q6ZT07 1266 aa20.28■□□□□ 0.84
DDX11-215ENST00000539699 API5Q9BZZ5 524 aaKnown RBP20.28■□□□□ 0.84
DDX11-215ENST00000539699 MORF4L1Q9UBU8 362 aa20.28■□□□□ 0.84
DDX11-215ENST00000539699 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.28■□□□□ 0.84
DDX11-215ENST00000539699 SPATA5Q8NB90 893 aa20.27■□□□□ 0.84
DDX11-215ENST00000539699 TRIB2Q92519 343 aa20.27■□□□□ 0.84
DDX11-215ENST00000539699 NEUROD6Q96NK8 337 aa20.27■□□□□ 0.84
DDX11-215ENST00000539699 C11orf49Q9H6J7 331 aa20.27■□□□□ 0.84
DDX11-215ENST00000539699 AS3MTQ9HBK9 375 aa20.27■□□□□ 0.84
DDX11-215ENST00000539699 HERC5Q9UII4 1024 aaKnown RBP20.27■□□□□ 0.84
DDX11-215ENST00000539699 OGDHLQ9ULD0 1010 aa20.27■□□□□ 0.84
DDX11-215ENST00000539699 ATAD5Q96QE3 1844 aa20.27■□□□□ 0.84
DDX11-215ENST00000539699 SRGAP3O43295 1099 aa20.26■□□□□ 0.83
DDX11-215ENST00000539699 SYN1P17600 705 aa20.26■□□□□ 0.83
DDX11-215ENST00000539699 TRMT2AQ8IZ69 625 aaKnown RBP20.26■□□□□ 0.83
DDX11-215ENST00000539699 WDR18Q9BV38 432 aa20.26■□□□□ 0.83
DDX11-215ENST00000539699 RAI14Q9P0K7 980 aa20.26■□□□□ 0.83
DDX11-215ENST00000539699 PLXNB2O15031 1838 aa20.25■□□□□ 0.83
DDX11-215ENST00000539699 CT47B1P0C2W7 299 aaPredicted RBP20.25■□□□□ 0.83
DDX11-215ENST00000539699 CYP2B6P20813 491 aa20.25■□□□□ 0.83
DDX11-215ENST00000539699 MAGEA10P43363 369 aaPredicted RBP20.25■□□□□ 0.83
DDX11-215ENST00000539699 IRX3P78415 501 aaPredicted RBP20.25■□□□□ 0.83
DDX11-215ENST00000539699 MTX1Q13505 466 aa20.25■□□□□ 0.83
DDX11-215ENST00000539699 LRIT3Q3SXY7 679 aa20.25■□□□□ 0.83
DDX11-215ENST00000539699 MAP3K21Q5TCX8 1036 aa20.25■□□□□ 0.83
DDX11-215ENST00000539699 TEX11Q8IYF3 940 aa20.25■□□□□ 0.83
DDX11-215ENST00000539699 DEFB123Q8N688 67 aa20.25■□□□□ 0.83
DDX11-215ENST00000539699 PI4KBQ9UBF8 816 aa20.25■□□□□ 0.83
DDX11-215ENST00000539699 DDX60LQ5H9U9 1706 aaKnown RBP20.24■□□□□ 0.83
DDX11-215ENST00000539699 ARID4AP29374 1257 aaPredicted RBP20.24■□□□□ 0.83
DDX11-215ENST00000539699 HOXA7P31268 230 aaPredicted RBP20.24■□□□□ 0.83
DDX11-215ENST00000539699 BACE1P56817 501 aa20.24■□□□□ 0.83
DDX11-215ENST00000539699 MTMR2Q13614 643 aa20.24■□□□□ 0.83
DDX11-215ENST00000539699 GORABQ5T7V8 394 aa20.24■□□□□ 0.83
DDX11-215ENST00000539699 P2RX7Q99572 595 aaKnown RBP20.24■□□□□ 0.83
DDX11-215ENST00000539699 CUL9Q8IWT3 2517 aa20.23■□□□□ 0.83
DDX11-215ENST00000539699 PEX10O60683 326 aa20.23■□□□□ 0.83
DDX11-215ENST00000539699 GNAI3P08754 354 aa20.23■□□□□ 0.83
DDX11-215ENST00000539699 XRCC5P13010 732 aaKnown RBP20.23■□□□□ 0.83
DDX11-215ENST00000539699 PRKAR2AP13861 404 aaKnown RBP20.23■□□□□ 0.83
DDX11-215ENST00000539699 Q7L0L9 218 aa20.23■□□□□ 0.83
DDX11-215ENST00000539699 TDHQ8IZJ6 230 aa20.23■□□□□ 0.83
DDX11-215ENST00000539699 GPRC5AQ8NFJ5 357 aa20.23■□□□□ 0.83
DDX11-215ENST00000539699 SH3RF3Q8TEJ3 882 aaPredicted RBP20.23■□□□□ 0.83
DDX11-215ENST00000539699 NUDT12Q9BQG2 462 aa20.23■□□□□ 0.83
DDX11-215ENST00000539699 DHX36Q9H2U1 1008 aaKnown RBP20.23■□□□□ 0.83
DDX11-215ENST00000539699 TXNRD2Q9NNW7 524 aa20.23■□□□□ 0.83
DDX11-215ENST00000539699 TMOD4Q9NZQ9 345 aa20.23■□□□□ 0.83
DDX11-215ENST00000539699 PFASO15067 1338 aa20.23■□□□□ 0.83
DDX11-215ENST00000539699 ASNSP08243 561 aa20.22■□□□□ 0.83
DDX11-215ENST00000539699 MCAMP43121 646 aa20.22■□□□□ 0.83
DDX11-215ENST00000539699 HERVK_113P62684 666 aa20.22■□□□□ 0.83
DDX11-215ENST00000539699 SOCS4Q8WXH5 440 aa20.22■□□□□ 0.83
DDX11-215ENST00000539699 LRP2BPQ9P2M1 347 aa20.22■□□□□ 0.83
DDX11-215ENST00000539699 C19orf81C9J6K1 198 aa20.21■□□□□ 0.83
DDX11-215ENST00000539699 JAG1P78504 1218 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms