RNA–Protein interactions for RNA: ENST00000539687.5

SPARC-209, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 511 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-209ENST00000539687 GPSM2P81274 684 aa11.82□□□□□ -0.52
SPARC-209ENST00000539687 AKAP17AQ02040 695 aaKnown RBP11.82□□□□□ -0.52
SPARC-209ENST00000539687 DDR1Q08345 913 aa11.82□□□□□ -0.52
SPARC-209ENST00000539687 CATIPQ7Z7H3 387 aa11.82□□□□□ -0.52
SPARC-209ENST00000539687 MICU3Q86XE3 530 aa11.82□□□□□ -0.52
SPARC-209ENST00000539687 CCDC24Q8N4L8 307 aa11.82□□□□□ -0.52
SPARC-209ENST00000539687 JMYQ8N9B5 988 aa11.82□□□□□ -0.52
SPARC-209ENST00000539687 SDR42E1Q8WUS8 393 aa11.82□□□□□ -0.52
SPARC-209ENST00000539687 ZSCAN10Q96SZ4 725 aaPredicted RBP11.82□□□□□ -0.52
SPARC-209ENST00000539687 EYA3Q99504 573 aa11.82□□□□□ -0.52
SPARC-209ENST00000539687 ALG1Q9BT22 464 aa11.82□□□□□ -0.52
SPARC-209ENST00000539687 COA1Q9GZY4 146 aa11.82□□□□□ -0.52
SPARC-209ENST00000539687 NUP62CLQ9H1M0 184 aa11.82□□□□□ -0.52
SPARC-209ENST00000539687 CD209Q9NNX6 404 aa11.82□□□□□ -0.52
SPARC-209ENST00000539687 DCP1AQ9NPI6 582 aaPredicted RBP11.82□□□□□ -0.52
SPARC-209ENST00000539687 POLR3EQ9NVU0 708 aa11.82□□□□□ -0.52
SPARC-209ENST00000539687 RTEL1Q9NZ71 1219 aa11.82□□□□□ -0.52
SPARC-209ENST00000539687 ATP6V0A2Q9Y487 856 aa11.82□□□□□ -0.52
SPARC-209ENST00000539687 LAMB1P07942 1786 aa11.82□□□□□ -0.52
SPARC-209ENST00000539687 TAF1P21675 1872 aa11.81□□□□□ -0.52
SPARC-209ENST00000539687 PRDX5P30044 214 aa11.81□□□□□ -0.52
SPARC-209ENST00000539687 USP5P45974 858 aa11.81□□□□□ -0.52
SPARC-209ENST00000539687 GNL2Q13823 731 aaKnown RBP11.81□□□□□ -0.52
SPARC-209ENST00000539687 MAP3K11Q16584 847 aa11.81□□□□□ -0.52
SPARC-209ENST00000539687 IFIT1BQ5T764 474 aaKnown RBP11.81□□□□□ -0.52
SPARC-209ENST00000539687 CTR9Q6PD62 1173 aa11.81□□□□□ -0.52
SPARC-209ENST00000539687 CHRDL2Q6WN34 429 aa11.81□□□□□ -0.52
SPARC-209ENST00000539687 CCDC73Q6ZRK6 1079 aa11.81□□□□□ -0.52
SPARC-209ENST00000539687 ZNF654Q8IZM8 581 aa11.81□□□□□ -0.52
SPARC-209ENST00000539687 TBC1D16Q8TBP0 767 aa11.81□□□□□ -0.52
SPARC-209ENST00000539687 FAM163AQ96GL9 167 aaPredicted RBP11.81□□□□□ -0.52
SPARC-209ENST00000539687 CHAMP1Q96JM3 812 aa11.81□□□□□ -0.52
SPARC-209ENST00000539687 PPP1R9BQ96SB3 815 aa11.81□□□□□ -0.52
SPARC-209ENST00000539687 RNF26Q9BY78 433 aaPredicted RBP11.81□□□□□ -0.52
SPARC-209ENST00000539687 GPHNQ9NQX3 736 aaPredicted RBP11.81□□□□□ -0.52
SPARC-209ENST00000539687 AATFQ9NY61 560 aaKnown RBP eCLIP11.81□□□□□ -0.52
SPARC-209ENST00000539687 MROH7-TTC4A0A0A0MT08 1334 aa11.81□□□□□ -0.52
SPARC-209ENST00000539687 TNKSO95271 1327 aa11.81□□□□□ -0.52
SPARC-209ENST00000539687 FAM205AQ6ZU69 1335 aa11.81□□□□□ -0.52
SPARC-209ENST00000539687 ROBO3Q96MS0 1386 aa11.8□□□□□ -0.52
SPARC-209ENST00000539687 MYH15Q9Y2K3 1946 aa11.8□□□□□ -0.52
SPARC-209ENST00000539687 A0A1W2PQ27 194 aa11.8□□□□□ -0.52
SPARC-209ENST00000539687 A0A1W2PQ64 194 aa11.8□□□□□ -0.52
SPARC-209ENST00000539687 A0A1W2PQD8 194 aa11.8□□□□□ -0.52
SPARC-209ENST00000539687 DYNLL1P63167 89 aaKnown RBP11.8□□□□□ -0.52
SPARC-209ENST00000539687 SEC23AQ15436 765 aa11.8□□□□□ -0.52
SPARC-209ENST00000539687 SF3A1Q15459 793 aaKnown RBP11.8□□□□□ -0.52
SPARC-209ENST00000539687 HS1BP3Q53T59 392 aa11.8□□□□□ -0.52
SPARC-209ENST00000539687 PROM2Q8N271 834 aa11.8□□□□□ -0.52
SPARC-209ENST00000539687 FANCBQ8NB91 859 aa11.8□□□□□ -0.52
SPARC-209ENST00000539687 MASTLQ96GX5 879 aa11.8□□□□□ -0.52
SPARC-209ENST00000539687 MAP3K14Q99558 947 aa11.8□□□□□ -0.52
SPARC-209ENST00000539687 TNMDQ9H2S6 317 aa11.8□□□□□ -0.52
SPARC-209ENST00000539687 PPP1R1BQ9UD71 204 aaPredicted RBP11.8□□□□□ -0.52
SPARC-209ENST00000539687 TAOK2Q9UL54 1235 aa11.8□□□□□ -0.52
SPARC-209ENST00000539687 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.8□□□□□ -0.52
SPARC-209ENST00000539687 USP17L12C9JPN9 530 aa11.79□□□□□ -0.52
SPARC-209ENST00000539687 USP17L21D6R901 530 aa11.79□□□□□ -0.52
SPARC-209ENST00000539687 C6orf229H3BNL8 230 aa11.79□□□□□ -0.52
SPARC-209ENST00000539687 RANBP6O60518 1105 aaKnown RBP11.79□□□□□ -0.52
SPARC-209ENST00000539687 SRGNP10124 158 aa11.79□□□□□ -0.52
SPARC-209ENST00000539687 KIF5BP33176 963 aa11.79□□□□□ -0.52
SPARC-209ENST00000539687 ADD1P35611 737 aaKnown RBP11.79□□□□□ -0.52
SPARC-209ENST00000539687 KIF23Q02241 960 aaPredicted RBP11.79□□□□□ -0.52
SPARC-209ENST00000539687 STK38Q15208 465 aa11.79□□□□□ -0.52
SPARC-209ENST00000539687 NTRK3Q16288 839 aa11.79□□□□□ -0.52
SPARC-209ENST00000539687 GRIPAP1Q4V328 841 aa11.79□□□□□ -0.52
SPARC-209ENST00000539687 MYSM1Q5VVJ2 828 aa11.79□□□□□ -0.52
SPARC-209ENST00000539687 POTEHQ6S545 545 aa11.79□□□□□ -0.52
SPARC-209ENST00000539687 TXNRD3Q86VQ6 643 aa11.79□□□□□ -0.52
SPARC-209ENST00000539687 COL23A1Q86Y22 540 aaPredicted RBP11.79□□□□□ -0.52
SPARC-209ENST00000539687 FAM177A1Q8N128 213 aaPredicted RBP11.79□□□□□ -0.52
SPARC-209ENST00000539687 RBSNQ9H1K0 784 aa11.79□□□□□ -0.52
SPARC-209ENST00000539687 CLSTN2Q9H4D0 955 aa11.79□□□□□ -0.52
SPARC-209ENST00000539687 TFIP11Q9UBB9 837 aaKnown RBP11.79□□□□□ -0.52
SPARC-209ENST00000539687 GPR75-ASB3A0A0A6YYF3 556 aa11.78□□□□□ -0.52
SPARC-209ENST00000539687 PITPNM1O00562 1244 aa11.78□□□□□ -0.52
SPARC-209ENST00000539687 ME1P48163 572 aa11.78□□□□□ -0.52
SPARC-209ENST00000539687 GNAQP50148 359 aa11.78□□□□□ -0.52
SPARC-209ENST00000539687 ZNF827Q17R98 1081 aa11.78□□□□□ -0.52
SPARC-209ENST00000539687 KRT40Q6A162 431 aa11.78□□□□□ -0.52
SPARC-209ENST00000539687 ADALQ6DHV7 355 aa11.78□□□□□ -0.52
SPARC-209ENST00000539687 STYK1Q6J9G0 422 aa11.78□□□□□ -0.52
SPARC-209ENST00000539687 RBM43Q6ZSC3 357 aaKnown RBP11.78□□□□□ -0.52
SPARC-209ENST00000539687 DGKHQ86XP1 1220 aa11.78□□□□□ -0.52
SPARC-209ENST00000539687 FAM43AQ8N2R8 423 aa11.78□□□□□ -0.52
SPARC-209ENST00000539687 MPNDQ8N594 471 aa11.78□□□□□ -0.52
SPARC-209ENST00000539687 CTCFLQ8NI51 663 aaPredicted RBP11.78□□□□□ -0.52
SPARC-209ENST00000539687 ZNF384Q8TF68 577 aa11.78□□□□□ -0.52
SPARC-209ENST00000539687 CAMKK2Q96RR4 588 aa11.78□□□□□ -0.52
SPARC-209ENST00000539687 USP28Q96RU2 1077 aa11.78□□□□□ -0.52
SPARC-209ENST00000539687 SLC26A6Q9BXS9 759 aa11.78□□□□□ -0.52
SPARC-209ENST00000539687 ZC3H12CQ9C0D7 883 aaKnown RBP11.78□□□□□ -0.52
SPARC-209ENST00000539687 FOXP1Q9H334 677 aaPredicted RBP11.78□□□□□ -0.52
SPARC-209ENST00000539687 BRMS1Q9HCU9 246 aa11.78□□□□□ -0.52
SPARC-209ENST00000539687 MCM9Q9NXL9 1143 aa11.78□□□□□ -0.52
SPARC-209ENST00000539687 CEP131Q9UPN4 1083 aa11.78□□□□□ -0.52
SPARC-209ENST00000539687 GAKO14976 1311 aa11.78□□□□□ -0.52
SPARC-209ENST00000539687 TCHHQ07283 1943 aa11.78□□□□□ -0.52
SPARC-209ENST00000539687 LTBP1Q14766 1721 aa11.77□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms