RNA–Protein interactions for RNA: ENST00000539493.2

RAB3GAP1-207, Transcript of RAB3 GTPase activating protein catalytic subunit 1, humanhuman

TSL 5 BASIC

Gene RAB3GAP1, Length 3,161 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP1-207ENST00000539493 LIG3P49916 1009 aa6.55□□□□□ -1.36
RAB3GAP1-207ENST00000539493 NEXNQ0ZGT2 675 aa6.55□□□□□ -1.36
RAB3GAP1-207ENST00000539493 CCDC144BQ3MJ40 725 aa6.55□□□□□ -1.36
RAB3GAP1-207ENST00000539493 VPS53Q5VIR6 699 aa6.55□□□□□ -1.36
RAB3GAP1-207ENST00000539493 MIS18BP1Q6P0N0 1132 aa6.55□□□□□ -1.36
RAB3GAP1-207ENST00000539493 HDXQ7Z353 690 aa6.55□□□□□ -1.36
RAB3GAP1-207ENST00000539493 CCDC144CPQ8IYA2 1237 aa6.55□□□□□ -1.36
RAB3GAP1-207ENST00000539493 ZCRB1Q8TBF4 217 aaKnown RBP6.55□□□□□ -1.36
RAB3GAP1-207ENST00000539493 KCNV2Q8TDN2 545 aa6.55□□□□□ -1.36
RAB3GAP1-207ENST00000539493 ZBTB10Q96DT7 871 aa6.55□□□□□ -1.36
RAB3GAP1-207ENST00000539493 FMNL2Q96PY5 1086 aa6.55□□□□□ -1.36
RAB3GAP1-207ENST00000539493 EPAS1Q99814 870 aa6.55□□□□□ -1.36
RAB3GAP1-207ENST00000539493 VIPAS39Q9H9C1 493 aa6.55□□□□□ -1.36
RAB3GAP1-207ENST00000539493 VPS18Q9P253 973 aa6.55□□□□□ -1.36
RAB3GAP1-207ENST00000539493 DDX20Q9UHI6 824 aaKnown RBP6.55□□□□□ -1.36
RAB3GAP1-207ENST00000539493 NRBP1Q9UHY1 535 aa6.55□□□□□ -1.36
RAB3GAP1-207ENST00000539493 RIPOR2Q9Y4F9 1068 aa6.55□□□□□ -1.36
RAB3GAP1-207ENST00000539493 AOX1Q06278 1338 aa6.54□□□□□ -1.36
RAB3GAP1-207ENST00000539493 GRM8O00222 908 aa6.54□□□□□ -1.36
RAB3GAP1-207ENST00000539493 IGKV5-2P06315 115 aa6.54□□□□□ -1.36
RAB3GAP1-207ENST00000539493 FERP16591 822 aa6.54□□□□□ -1.36
RAB3GAP1-207ENST00000539493 SYT1P21579 422 aa6.54□□□□□ -1.36
RAB3GAP1-207ENST00000539493 PABPC4Q13310 644 aaKnown RBP eCLIP6.54□□□□□ -1.366e-12■■□□□ 13.3
RAB3GAP1-207ENST00000539493 DRP2Q13474 957 aa6.54□□□□□ -1.36
RAB3GAP1-207ENST00000539493 SNW1Q13573 536 aaKnown RBP6.54□□□□□ -1.36
RAB3GAP1-207ENST00000539493 BEND6Q5SZJ8 279 aaPredicted RBP6.54□□□□□ -1.36
RAB3GAP1-207ENST00000539493 ARHGAP22Q7Z5H3 698 aa6.54□□□□□ -1.36
RAB3GAP1-207ENST00000539493 SMCR8Q8TEV9 937 aaPredicted RBP6.54□□□□□ -1.36
RAB3GAP1-207ENST00000539493 TSGA10Q9BZW7 698 aa6.54□□□□□ -1.36
RAB3GAP1-207ENST00000539493 OSBPL5Q9H0X9 879 aaPredicted RBP6.54□□□□□ -1.36
RAB3GAP1-207ENST00000539493 SMAPO00193 183 aa6.54□□□□□ -1.36
RAB3GAP1-207ENST00000539493 SMNDC1O75940 238 aaKnown RBP eCLIP6.54□□□□□ -1.36
RAB3GAP1-207ENST00000539493 COPS6Q7L5N1 327 aa6.54□□□□□ -1.36
RAB3GAP1-207ENST00000539493 RIC3Q7Z5B4 369 aa6.54□□□□□ -1.36
RAB3GAP1-207ENST00000539493 CNNM3Q8NE01 707 aa6.54□□□□□ -1.36
RAB3GAP1-207ENST00000539493 XAGE3Q8WTP9 111 aa6.54□□□□□ -1.36
RAB3GAP1-207ENST00000539493 TEKT1Q969V4 418 aa6.54□□□□□ -1.36
RAB3GAP1-207ENST00000539493 KAZALD1Q96I82 304 aa6.54□□□□□ -1.36
RAB3GAP1-207ENST00000539493 CD248Q9HCU0 757 aa6.54□□□□□ -1.36
RAB3GAP1-207ENST00000539493 WDR33Q9C0J8 1336 aaKnown RBP6.53□□□□□ -1.36
RAB3GAP1-207ENST00000539493 LRRC10BA6NIK2 292 aa6.53□□□□□ -1.36
RAB3GAP1-207ENST00000539493 POTEB2H3BUK9 544 aa6.53□□□□□ -1.36
RAB3GAP1-207ENST00000539493 ECM2O94769 699 aaPredicted RBP6.53□□□□□ -1.36
RAB3GAP1-207ENST00000539493 PRPF6O94906 941 aaKnown RBP6.53□□□□□ -1.36
RAB3GAP1-207ENST00000539493 IL2RBP14784 551 aa6.53□□□□□ -1.36
RAB3GAP1-207ENST00000539493 RPL13P26373 211 aaKnown RBP6.53□□□□□ -1.36
RAB3GAP1-207ENST00000539493 PIP4K2AP48426 406 aaPredicted RBP6.53□□□□□ -1.36
RAB3GAP1-207ENST00000539493 LARP1Q6PKG0 1096 aaKnown RBP6.53□□□□□ -1.36
RAB3GAP1-207ENST00000539493 TAX1BP1Q86VP1 789 aa6.53□□□□□ -1.36
RAB3GAP1-207ENST00000539493 UNC5CLQ8IV45 518 aa6.53□□□□□ -1.36
RAB3GAP1-207ENST00000539493 PI4K2BQ8TCG2 481 aa6.53□□□□□ -1.36
RAB3GAP1-207ENST00000539493 SUCLG2Q96I99 432 aa6.53□□□□□ -1.36
RAB3GAP1-207ENST00000539493 L1RE1Q9UN81 338 aa6.53□□□□□ -1.36
RAB3GAP1-207ENST00000539493 NEURL1BA8MQ27 555 aa6.53□□□□□ -1.36
RAB3GAP1-207ENST00000539493 EBAG9O00559 213 aa6.53□□□□□ -1.36
RAB3GAP1-207ENST00000539493 ERLIN1O75477 346 aa6.53□□□□□ -1.36
RAB3GAP1-207ENST00000539493 FAM200BP0CF97 657 aa6.53□□□□□ -1.36
RAB3GAP1-207ENST00000539493 NAP1L1P55209 391 aaKnown RBP6.53□□□□□ -1.36
RAB3GAP1-207ENST00000539493 GSDMDP57764 484 aa6.53□□□□□ -1.36
RAB3GAP1-207ENST00000539493 ETF1P62495 437 aaKnown RBP6.53□□□□□ -1.36
RAB3GAP1-207ENST00000539493 MSANTD4Q8NCY6 345 aa6.53□□□□□ -1.36
RAB3GAP1-207ENST00000539493 RILPL2Q969X0 211 aa6.53□□□□□ -1.36
RAB3GAP1-207ENST00000539493 RBM41Q96IZ5 413 aaKnown RBP6.53□□□□□ -1.36
RAB3GAP1-207ENST00000539493 PPP1R13BQ96KQ4 1090 aa6.53□□□□□ -1.36
RAB3GAP1-207ENST00000539493 MMADHCQ9H3L0 296 aaPredicted RBP6.53□□□□□ -1.36
RAB3GAP1-207ENST00000539493 BICC1Q9H694 974 aaKnown RBP6.53□□□□□ -1.36
RAB3GAP1-207ENST00000539493 STRN4Q9NRL3 753 aa6.53□□□□□ -1.36
RAB3GAP1-207ENST00000539493 KLC4Q9NSK0 619 aa6.53□□□□□ -1.36
RAB3GAP1-207ENST00000539493 RTEL1Q9NZ71 1219 aa6.53□□□□□ -1.36
RAB3GAP1-207ENST00000539493 IMPACTQ9P2X3 320 aa6.53□□□□□ -1.36
RAB3GAP1-207ENST00000539493 BARX2Q9UMQ3 279 aaPredicted RBP6.53□□□□□ -1.36
RAB3GAP1-207ENST00000539493 IPO5O00410 1097 aaKnown RBP6.53□□□□□ -1.36
RAB3GAP1-207ENST00000539493 TUBBP07437 444 aa6.53□□□□□ -1.36
RAB3GAP1-207ENST00000539493 SLC8A1P32418 973 aa6.53□□□□□ -1.36
RAB3GAP1-207ENST00000539493 KCNB1Q14721 858 aa6.53□□□□□ -1.36
RAB3GAP1-207ENST00000539493 NKX1-1Q15270 411 aaPredicted RBP6.53□□□□□ -1.36
RAB3GAP1-207ENST00000539493 E4F1Q66K89 784 aaPredicted RBP6.53□□□□□ -1.36
RAB3GAP1-207ENST00000539493 SLC30A9Q6PML9 568 aa6.53□□□□□ -1.36
RAB3GAP1-207ENST00000539493 ANKRD13DQ6ZTN6 518 aa6.53□□□□□ -1.36
RAB3GAP1-207ENST00000539493 CXorf38Q8TB03 319 aa6.53□□□□□ -1.36
RAB3GAP1-207ENST00000539493 SLC35B4Q969S0 331 aa6.53□□□□□ -1.36
RAB3GAP1-207ENST00000539493 CCDC34Q96HJ3 373 aa6.53□□□□□ -1.36
RAB3GAP1-207ENST00000539493 CLIC6Q96NY7 704 aa6.53□□□□□ -1.36
RAB3GAP1-207ENST00000539493 ESYT1Q9BSJ8 1104 aa6.53□□□□□ -1.36
RAB3GAP1-207ENST00000539493 METTL22Q9BUU2 404 aaPredicted RBP6.53□□□□□ -1.36
RAB3GAP1-207ENST00000539493 TMOD4Q9NZQ9 345 aa6.53□□□□□ -1.36
RAB3GAP1-207ENST00000539493 ZNF510Q9Y2H8 683 aa6.53□□□□□ -1.36
RAB3GAP1-207ENST00000539493 WDR37Q9Y2I8 494 aa6.53□□□□□ -1.36
RAB3GAP1-207ENST00000539493 FAN1Q9Y2M0 1017 aa6.53□□□□□ -1.36
RAB3GAP1-207ENST00000539493 SHANK3Q9BYB0 1731 aa6.52□□□□□ -1.37
RAB3GAP1-207ENST00000539493 LAMB4A4D0S4 1761 aa6.52□□□□□ -1.37
RAB3GAP1-207ENST00000539493 A6NHS1 94 aa6.52□□□□□ -1.37
RAB3GAP1-207ENST00000539493 A6NNZ2 444 aa6.52□□□□□ -1.37
RAB3GAP1-207ENST00000539493 ERVV-2B6SEH9 535 aa6.52□□□□□ -1.37
RAB3GAP1-207ENST00000539493 MGRN1O60291 552 aa6.52□□□□□ -1.37
RAB3GAP1-207ENST00000539493 RNF8O76064 485 aa6.52□□□□□ -1.37
RAB3GAP1-207ENST00000539493 VDRP11473 427 aa6.52□□□□□ -1.37
RAB3GAP1-207ENST00000539493 HARSP12081 509 aaKnown RBP6.52□□□□□ -1.37
RAB3GAP1-207ENST00000539493 EZRP15311 586 aaKnown RBP6.52□□□□□ -1.37
RAB3GAP1-207ENST00000539493 VCAM1P19320 739 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms