RNA–Protein interactions for RNA: ENST00000539469.6

PDZRN4-203, Transcript of PDZ domain containing ring finger 4, humanhuman

TSL 1 (best) BASIC

Gene PDZRN4, Length 3,041 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN4-203ENST00000539469 NSFL1CQ9UNZ2 370 aaKnown RBP7.2□□□□□ -1.26
PDZRN4-203ENST00000539469 PSME4Q14997 1843 aa7.2□□□□□ -1.26
PDZRN4-203ENST00000539469 ARFGEF1Q9Y6D6 1849 aa7.2□□□□□ -1.26
PDZRN4-203ENST00000539469 CDK5RAP2Q96SN8 1893 aa7.2□□□□□ -1.26
PDZRN4-203ENST00000539469 UFL1O94874 794 aa7.2□□□□□ -1.26
PDZRN4-203ENST00000539469 DPEP1P16444 411 aa7.2□□□□□ -1.26
PDZRN4-203ENST00000539469 MAPK1P28482 360 aa7.2□□□□□ -1.26
PDZRN4-203ENST00000539469 MTMR3Q13615 1198 aa7.2□□□□□ -1.26
PDZRN4-203ENST00000539469 CWC27Q6UX04 472 aaKnown RBP7.2□□□□□ -1.26
PDZRN4-203ENST00000539469 NOP9Q86U38 636 aaKnown RBP7.2□□□□□ -1.26
PDZRN4-203ENST00000539469 JAZF1Q86VZ6 243 aa7.2□□□□□ -1.26
PDZRN4-203ENST00000539469 PLPP6Q8IY26 295 aa7.2□□□□□ -1.26
PDZRN4-203ENST00000539469 CNPY4Q8N129 248 aa7.2□□□□□ -1.26
PDZRN4-203ENST00000539469 KBTBD3Q8NAB2 608 aa7.2□□□□□ -1.26
PDZRN4-203ENST00000539469 TBC1D16Q8TBP0 767 aa7.2□□□□□ -1.26
PDZRN4-203ENST00000539469 SPIRE2Q8WWL2 714 aa7.2□□□□□ -1.26
PDZRN4-203ENST00000539469 SEC62Q99442 399 aaKnown RBP7.2□□□□□ -1.26
PDZRN4-203ENST00000539469 RNF19AQ9NV58 838 aa7.2□□□□□ -1.26
PDZRN4-203ENST00000539469 WWC3Q9ULE0 1092 aa7.2□□□□□ -1.26
PDZRN4-203ENST00000539469 MRPL42Q9Y6G3 142 aaKnown RBP7.2□□□□□ -1.26
PDZRN4-203ENST00000539469 LAMA4Q16363 1823 aa7.2□□□□□ -1.26
PDZRN4-203ENST00000539469 COL4A5P29400 1685 aa7.2□□□□□ -1.26
PDZRN4-203ENST00000539469 RFX7Q2KHR2 1363 aa7.2□□□□□ -1.26
PDZRN4-203ENST00000539469 MED23Q9ULK4 1368 aa7.2□□□□□ -1.26
PDZRN4-203ENST00000539469 GOLGA6L22H0YM25 854 aa7.19□□□□□ -1.26
PDZRN4-203ENST00000539469 H3BRB1 525 aa7.19□□□□□ -1.26
PDZRN4-203ENST00000539469 KCNJ4P48050 445 aa7.19□□□□□ -1.26
PDZRN4-203ENST00000539469 CRTC2Q53ET0 693 aaPredicted RBP7.19□□□□□ -1.26
PDZRN4-203ENST00000539469 SP8Q8IXZ3 490 aa7.19□□□□□ -1.26
PDZRN4-203ENST00000539469 SPATA5Q8NB90 893 aa7.19□□□□□ -1.26
PDZRN4-203ENST00000539469 TRIM34Q9BYJ4 488 aa7.19□□□□□ -1.26
PDZRN4-203ENST00000539469 TUT1Q9H6E5 874 aaKnown RBP7.19□□□□□ -1.26
PDZRN4-203ENST00000539469 FAN1Q9Y2M0 1017 aa7.19□□□□□ -1.26
PDZRN4-203ENST00000539469 CCDC194A0A1B0GVG4 234 aa7.19□□□□□ -1.26
PDZRN4-203ENST00000539469 PTMAP06454 111 aaKnown RBP7.19□□□□□ -1.26
PDZRN4-203ENST00000539469 ALDH1B1P30837 517 aa7.19□□□□□ -1.26
PDZRN4-203ENST00000539469 WASHC4Q2M389 1173 aa7.19□□□□□ -1.26
PDZRN4-203ENST00000539469 ZNF589Q86UQ0 364 aaPredicted RBP7.19□□□□□ -1.26
PDZRN4-203ENST00000539469 C7orf43Q8WVR3 580 aa7.19□□□□□ -1.26
PDZRN4-203ENST00000539469 ZNF830Q96NB3 372 aaPredicted RBP7.19□□□□□ -1.26
PDZRN4-203ENST00000539469 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.19□□□□□ -1.26
PDZRN4-203ENST00000539469 JAG2Q9Y219 1238 aa7.19□□□□□ -1.26
PDZRN4-203ENST00000539469 SGSM2O43147 1006 aa7.19□□□□□ -1.26
PDZRN4-203ENST00000539469 BAG4O95429 457 aaKnown RBP7.19□□□□□ -1.26
PDZRN4-203ENST00000539469 UQCRFS1P1P0C7P4 283 aa7.19□□□□□ -1.26
PDZRN4-203ENST00000539469 ATP2B1P20020 1258 aa7.19□□□□□ -1.26
PDZRN4-203ENST00000539469 CCDC129Q6ZRS4 1044 aa7.19□□□□□ -1.26
PDZRN4-203ENST00000539469 ACBD3Q9H3P7 528 aa7.19□□□□□ -1.26
PDZRN4-203ENST00000539469 GGA1Q9UJY5 639 aa7.19□□□□□ -1.26
PDZRN4-203ENST00000539469 LEMD3Q9Y2U8 911 aa7.19□□□□□ -1.26
PDZRN4-203ENST00000539469 MYH2Q9UKX2 1941 aa7.18□□□□□ -1.26
PDZRN4-203ENST00000539469 PRPF40AO75400 957 aaKnown RBP7.18□□□□□ -1.26
PDZRN4-203ENST00000539469 CTDSPL2Q05D32 466 aa7.18□□□□□ -1.26
PDZRN4-203ENST00000539469 SKOR2Q2VWA4 1001 aaPredicted RBP7.18□□□□□ -1.26
PDZRN4-203ENST00000539469 ZSCAN23Q3MJ62 389 aa7.18□□□□□ -1.26
PDZRN4-203ENST00000539469 C17orf53Q8N3J3 647 aaPredicted RBP7.18□□□□□ -1.26
PDZRN4-203ENST00000539469 KCNB2Q92953 911 aa7.18□□□□□ -1.26
PDZRN4-203ENST00000539469 PPP1R9BQ96SB3 815 aa7.18□□□□□ -1.26
PDZRN4-203ENST00000539469 DIAPH3Q9NSV4 1193 aa7.18□□□□□ -1.26
PDZRN4-203ENST00000539469 PNMA2Q9UL42 364 aa7.18□□□□□ -1.26
PDZRN4-203ENST00000539469 M0R2C6 588 aa7.18□□□□□ -1.26
PDZRN4-203ENST00000539469 ATP2B4P23634 1241 aa7.18□□□□□ -1.26
PDZRN4-203ENST00000539469 VAMP1P23763 118 aa7.18□□□□□ -1.26
PDZRN4-203ENST00000539469 POLD1P28340 1107 aa7.18□□□□□ -1.26
PDZRN4-203ENST00000539469 HIBADHP31937 336 aaKnown RBP7.18□□□□□ -1.26
PDZRN4-203ENST00000539469 PTH1RQ03431 593 aa7.18□□□□□ -1.26
PDZRN4-203ENST00000539469 CASC1Q6TDU7 716 aa7.18□□□□□ -1.26
PDZRN4-203ENST00000539469 TMC4Q7Z404 712 aa7.18□□□□□ -1.26
PDZRN4-203ENST00000539469 TMTC2Q8N394 836 aa7.18□□□□□ -1.26
PDZRN4-203ENST00000539469 LRRN4Q8WUT4 740 aa7.18□□□□□ -1.26
PDZRN4-203ENST00000539469 USP26Q9BXU7 913 aa7.18□□□□□ -1.26
PDZRN4-203ENST00000539469 MAST3O60307 1309 aa7.17□□□□□ -1.26
PDZRN4-203ENST00000539469 SYCE3A1L190 88 aa7.17□□□□□ -1.26
PDZRN4-203ENST00000539469 C21orf2O43822 256 aa7.17□□□□□ -1.26
PDZRN4-203ENST00000539469 CAVIN4Q5BKX8 364 aa7.17□□□□□ -1.26
PDZRN4-203ENST00000539469 C15orf52Q6ZUT6 534 aaKnown RBP7.17□□□□□ -1.26
PDZRN4-203ENST00000539469 ZNF384Q8TF68 577 aa7.17□□□□□ -1.26
PDZRN4-203ENST00000539469 KIF2CQ99661 725 aa7.17□□□□□ -1.26
PDZRN4-203ENST00000539469 TINF2Q9BSI4 451 aa7.17□□□□□ -1.26
PDZRN4-203ENST00000539469 LSG1Q9H089 658 aaKnown RBP7.17□□□□□ -1.26
PDZRN4-203ENST00000539469 TCRBV5S4A2TA0A5A2 114 aa7.17□□□□□ -1.26
PDZRN4-203ENST00000539469 C6orf229H3BNL8 230 aa7.17□□□□□ -1.26
PDZRN4-203ENST00000539469 K7ELQ4 463 aaPredicted RBP7.17□□□□□ -1.26
PDZRN4-203ENST00000539469 RIMBP2O15034 1052 aa7.17□□□□□ -1.26
PDZRN4-203ENST00000539469 DDIT3P35638 169 aa7.17□□□□□ -1.26
PDZRN4-203ENST00000539469 GRIK5Q16478 980 aa7.17□□□□□ -1.26
PDZRN4-203ENST00000539469 DPP8Q6V1X1 898 aaPredicted RBP7.17□□□□□ -1.26
PDZRN4-203ENST00000539469 NLGN2Q8NFZ4 835 aa7.17□□□□□ -1.26
PDZRN4-203ENST00000539469 CNKSR1Q969H4 720 aa7.17□□□□□ -1.26
PDZRN4-203ENST00000539469 PRR12Q9ULL5 1215 aa7.17□□□□□ -1.26
PDZRN4-203ENST00000539469 ISY1Q9ULR0 285 aaKnown RBP7.17□□□□□ -1.26
PDZRN4-203ENST00000539469 FOCADQ5VW36 1801 aa7.17□□□□□ -1.26
PDZRN4-203ENST00000539469 LAMB1P07942 1786 aa7.17□□□□□ -1.26
PDZRN4-203ENST00000539469 RNF113AO15541 343 aaKnown RBP7.17□□□□□ -1.26
PDZRN4-203ENST00000539469 CREB3O43889 395 aa7.17□□□□□ -1.26
PDZRN4-203ENST00000539469 ZMYM1Q5SVZ6 1142 aa7.17□□□□□ -1.26
PDZRN4-203ENST00000539469 LDLRAD1Q5T700 205 aa7.17□□□□□ -1.26
PDZRN4-203ENST00000539469 ADGRA1Q86SQ6 560 aa7.17□□□□□ -1.26
PDZRN4-203ENST00000539469 VPS37DQ86XT2 251 aa7.17□□□□□ -1.26
PDZRN4-203ENST00000539469 TDRD7Q8NHU6 1098 aaKnown RBP7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms