RNA–Protein interactions for RNA: ENST00000539338.6

CACNB1-206, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 1 (best)

Gene CACNB1, Length 5,308 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-206ENST00000539338 UBE2Q2Q8WVN8 375 aa16.35■□□□□ 0.21
CACNB1-206ENST00000539338 IFT81Q8WYA0 676 aa16.35■□□□□ 0.21
CACNB1-206ENST00000539338 EN1Q05925 392 aaPredicted RBP16.34■□□□□ 0.21
CACNB1-206ENST00000539338 DENND2AQ9ULE3 1009 aa16.34■□□□□ 0.21
CACNB1-206ENST00000539338 OPA1O60313 960 aa16.34■□□□□ 0.21
CACNB1-206ENST00000539338 PARP1P09874 1014 aaKnown RBP16.34■□□□□ 0.21
CACNB1-206ENST00000539338 GRIPAP1Q4V328 841 aa16.34■□□□□ 0.21
CACNB1-206ENST00000539338 CFAP65Q6ZU64 1925 aaKnown RBP16.34■□□□□ 0.21
CACNB1-206ENST00000539338 FAM13AO94988 1023 aa16.34■□□□□ 0.21
CACNB1-206ENST00000539338 BBXQ8WY36 941 aaPredicted RBP16.34■□□□□ 0.21
CACNB1-206ENST00000539338 SH3TC1Q8TE82 1336 aa16.34■□□□□ 0.21
CACNB1-206ENST00000539338 GJC1P36383 396 aa16.34■□□□□ 0.21
CACNB1-206ENST00000539338 PPP2R3AQ06190 1150 aa16.34■□□□□ 0.21
CACNB1-206ENST00000539338 GIGYF2Q6Y7W6 1299 aaKnown RBP16.34■□□□□ 0.21
CACNB1-206ENST00000539338 ERO1AQ96HE7 468 aa16.34■□□□□ 0.21
CACNB1-206ENST00000539338 PLVAPQ9BX97 442 aa16.34■□□□□ 0.21
CACNB1-206ENST00000539338 KRT40Q6A162 431 aa16.33■□□□□ 0.21
CACNB1-206ENST00000539338 KIF24Q5T7B8 1368 aa16.33■□□□□ 0.21
CACNB1-206ENST00000539338 IL17REQ8NFR9 667 aa16.33■□□□□ 0.21
CACNB1-206ENST00000539338 KDM5AP29375 1690 aaKnown RBP16.33■□□□□ 0.2
CACNB1-206ENST00000539338 E7EWF7 191 aa16.33■□□□□ 0.2
CACNB1-206ENST00000539338 SSH3Q8TE77 659 aa16.33■□□□□ 0.2
CACNB1-206ENST00000539338 TMEM106CQ9BVX2 250 aa16.33■□□□□ 0.2
CACNB1-206ENST00000539338 A0A0D9SFI3 127 aa16.33■□□□□ 0.2
CACNB1-206ENST00000539338 PDE8AO60658 829 aa16.33■□□□□ 0.2
CACNB1-206ENST00000539338 TERF1P54274 439 aa16.33■□□□□ 0.2
CACNB1-206ENST00000539338 OGFRQ9NZT2 677 aa16.33■□□□□ 0.2
CACNB1-206ENST00000539338 CUTAO60888 179 aa16.32■□□□□ 0.2
CACNB1-206ENST00000539338 IVLP07476 585 aa16.32■□□□□ 0.2
CACNB1-206ENST00000539338 RTKN2Q8IZC4 609 aa16.32■□□□□ 0.2
CACNB1-206ENST00000539338 IPO4Q8TEX9 1081 aaKnown RBP16.32■□□□□ 0.2
CACNB1-206ENST00000539338 NOC4LQ9BVI4 516 aaKnown RBP16.32■□□□□ 0.2
CACNB1-206ENST00000539338 KCNJ14Q9UNX9 436 aa16.32■□□□□ 0.2
CACNB1-206ENST00000539338 PPM1FP49593 454 aaPredicted RBP16.32■□□□□ 0.2
CACNB1-206ENST00000539338 IRX3P78415 501 aaPredicted RBP16.32■□□□□ 0.2
CACNB1-206ENST00000539338 PDE4DQ08499 809 aa16.32■□□□□ 0.2
CACNB1-206ENST00000539338 A0A1W2PRG0 241 aa16.32■□□□□ 0.2
CACNB1-206ENST00000539338 NEURL1BA8MQ27 555 aa16.32■□□□□ 0.2
CACNB1-206ENST00000539338 TBC1D8BQ0IIM8 1120 aa16.32■□□□□ 0.2
CACNB1-206ENST00000539338 SV2BQ7L1I2 683 aa16.32■□□□□ 0.2
CACNB1-206ENST00000539338 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.32■□□□□ 0.2
CACNB1-206ENST00000539338 NLRP12P59046 1061 aa16.32■□□□□ 0.2
CACNB1-206ENST00000539338 LMBR1Q8WVP7 490 aa16.32■□□□□ 0.2
CACNB1-206ENST00000539338 PAIP2Q9BPZ3 127 aaKnown RBP16.32■□□□□ 0.2
CACNB1-206ENST00000539338 TM6SF1Q9BZW5 370 aa16.32■□□□□ 0.2
CACNB1-206ENST00000539338 hCG_1642624A0A1W2PR95 340 aa16.32■□□□□ 0.2
CACNB1-206ENST00000539338 RAPGEF1Q13905 1077 aa16.32■□□□□ 0.2
CACNB1-206ENST00000539338 DCAF17Q5H9S7 520 aaPredicted RBP16.32■□□□□ 0.2
CACNB1-206ENST00000539338 AS3MTQ9HBK9 375 aa16.32■□□□□ 0.2
CACNB1-206ENST00000539338 GPCPD1Q9NPB8 672 aa16.32■□□□□ 0.2
CACNB1-206ENST00000539338 RASAL2Q9UJF2 1139 aa16.32■□□□□ 0.2
CACNB1-206ENST00000539338 PTPRMP28827 1452 aa16.31■□□□□ 0.2
CACNB1-206ENST00000539338 TRAF5O00463 557 aa16.31■□□□□ 0.2
CACNB1-206ENST00000539338 ATP5JP18859 108 aa16.31■□□□□ 0.2
CACNB1-206ENST00000539338 ACTN2P35609 894 aa16.31■□□□□ 0.2
CACNB1-206ENST00000539338 EAF2Q96CJ1 260 aaPredicted RBP16.31■□□□□ 0.2
CACNB1-206ENST00000539338 SYNCQ9H7C4 482 aa16.31■□□□□ 0.2
CACNB1-206ENST00000539338 ZBTB21Q9ULJ3 1066 aa16.31■□□□□ 0.2
CACNB1-206ENST00000539338 ZNF532Q9HCE3 1301 aa16.31■□□□□ 0.2
CACNB1-206ENST00000539338 SYNRGQ9UMZ2 1314 aa16.31■□□□□ 0.2
CACNB1-206ENST00000539338 MNAT1P51948 309 aa16.31■□□□□ 0.2
CACNB1-206ENST00000539338 HS2ST1Q7LGA3 356 aa16.31■□□□□ 0.2
CACNB1-206ENST00000539338 USP37Q86T82 979 aa16.31■□□□□ 0.2
CACNB1-206ENST00000539338 TEX11Q8IYF3 940 aa16.31■□□□□ 0.2
CACNB1-206ENST00000539338 TRMT2AQ8IZ69 625 aaKnown RBP16.31■□□□□ 0.2
CACNB1-206ENST00000539338 PLEKHF1Q96S99 279 aa16.31■□□□□ 0.2
CACNB1-206ENST00000539338 SEC62Q99442 399 aaKnown RBP16.31■□□□□ 0.2
CACNB1-206ENST00000539338 HOMER2Q9NSB8 354 aa16.31■□□□□ 0.2
CACNB1-206ENST00000539338 CERS3Q8IU89 383 aa16.31■□□□□ 0.2
CACNB1-206ENST00000539338 CARD6Q9BX69 1037 aa16.31■□□□□ 0.2
CACNB1-206ENST00000539338 AKNAD1Q5T1N1 836 aa16.31■□□□□ 0.2
CACNB1-206ENST00000539338 TTLL6Q8N841 843 aa16.31■□□□□ 0.2
CACNB1-206ENST00000539338 PLXNC1O60486 1568 aa16.3■□□□□ 0.2
CACNB1-206ENST00000539338 ZEB2O60315 1214 aa16.3■□□□□ 0.2
CACNB1-206ENST00000539338 NCBP1Q09161 790 aaKnown RBP16.3■□□□□ 0.2
CACNB1-206ENST00000539338 SUPT20HL1Q3ZLR7 823 aa16.3■□□□□ 0.2
CACNB1-206ENST00000539338 TTC38Q5R3I4 469 aa16.3■□□□□ 0.2
CACNB1-206ENST00000539338 DNAJC10Q8IXB1 793 aa16.3■□□□□ 0.2
CACNB1-206ENST00000539338 NFE2L3Q9Y4A8 694 aa16.3■□□□□ 0.2
CACNB1-206ENST00000539338 IKBKGQ9Y6K9 419 aa16.3■□□□□ 0.2
CACNB1-206ENST00000539338 SMIM23A6NLE4 172 aa16.3■□□□□ 0.2
CACNB1-206ENST00000539338 HIBADHP31937 336 aaKnown RBP16.3■□□□□ 0.2
CACNB1-206ENST00000539338 PLCD1P51178 756 aa16.3■□□□□ 0.2
CACNB1-206ENST00000539338 ELF2Q15723 593 aa16.3■□□□□ 0.2
CACNB1-206ENST00000539338 AATFQ9NY61 560 aaKnown RBP eCLIP16.3■□□□□ 0.2
CACNB1-206ENST00000539338 RNF181Q9P0P0 153 aa16.3■□□□□ 0.2
CACNB1-206ENST00000539338 TPCN1Q9ULQ1 816 aa16.3■□□□□ 0.2
CACNB1-206ENST00000539338 PRPHP41219 470 aa16.3■□□□□ 0.2
CACNB1-206ENST00000539338 MYRIPQ8NFW9 859 aa16.3■□□□□ 0.2
CACNB1-206ENST00000539338 STAMQ92783 540 aa16.3■□□□□ 0.2
CACNB1-206ENST00000539338 GTPBP4Q9BZE4 634 aaKnown RBP16.3■□□□□ 0.2
CACNB1-206ENST00000539338 HECW2Q9P2P5 1572 aa16.3■□□□□ 0.2
CACNB1-206ENST00000539338 VAV2P52735 878 aa16.29■□□□□ 0.2
CACNB1-206ENST00000539338 LONRF3Q496Y0 759 aa16.29■□□□□ 0.2
CACNB1-206ENST00000539338 TRMT44Q8IYL2 757 aaKnown RBP16.29■□□□□ 0.2
CACNB1-206ENST00000539338 CCNT1O60563 726 aaKnown RBP16.29■□□□□ 0.2
CACNB1-206ENST00000539338 GIGYF1O75420 1035 aaPredicted RBP16.29■□□□□ 0.2
CACNB1-206ENST00000539338 EEF2P13639 858 aaKnown RBP16.29■□□□□ 0.2
CACNB1-206ENST00000539338 GPIHBP1Q8IV16 184 aa16.29■□□□□ 0.2
CACNB1-206ENST00000539338 GPT2Q8TD30 523 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms