RNA–Protein interactions for RNA: ENST00000539320.2

SCARB1-206, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 720 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-206ENST00000539320 FRMD4AQ9P2Q2 1039 aaPredicted RBP27.11■■□□□ 1.93
SCARB1-206ENST00000539320 FLT1P17948 1338 aa27.11■■□□□ 1.93
SCARB1-206ENST00000539320 SIPA1L1O43166 1804 aa27.11■■□□□ 1.93
SCARB1-206ENST00000539320 FOCADQ5VW36 1801 aa27.11■■□□□ 1.93
SCARB1-206ENST00000539320 GADL1Q6ZQY3 521 aa27.1■■□□□ 1.93
SCARB1-206ENST00000539320 CCDC84Q86UT8 332 aaPredicted RBP27.1■■□□□ 1.93
SCARB1-206ENST00000539320 MAPKAPK5Q8IW41 473 aa27.1■■□□□ 1.93
SCARB1-206ENST00000539320 TGFBRAP1Q8WUH2 860 aa27.1■■□□□ 1.93
SCARB1-206ENST00000539320 DHX36Q9H2U1 1008 aaKnown RBP27.1■■□□□ 1.93
SCARB1-206ENST00000539320 CHMP4BQ9H444 224 aaKnown RBP27.1■■□□□ 1.93
SCARB1-206ENST00000539320 HERC5Q9UII4 1024 aaKnown RBP27.1■■□□□ 1.93
SCARB1-206ENST00000539320 TRIM75PA6NK02 468 aa27.09■■□□□ 1.93
SCARB1-206ENST00000539320 CYP7A1P22680 504 aa27.09■■□□□ 1.93
SCARB1-206ENST00000539320 KIF1BPQ96EK5 621 aa27.09■■□□□ 1.93
SCARB1-206ENST00000539320 ATAD5Q96QE3 1844 aa27.09■■□□□ 1.93
SCARB1-206ENST00000539320 RBBP6Q7Z6E9 1792 aaKnown RBP27.08■■□□□ 1.93
SCARB1-206ENST00000539320 GNRH1P01148 92 aa27.08■■□□□ 1.93
SCARB1-206ENST00000539320 PI4KBQ9UBF8 816 aa27.08■■□□□ 1.93
SCARB1-206ENST00000539320 NDUFB9Q9Y6M9 179 aa27.08■■□□□ 1.93
SCARB1-206ENST00000539320 CYP2C8P10632 490 aa27.07■■□□□ 1.92
SCARB1-206ENST00000539320 SLC9C1Q4G0N8 1177 aa27.07■■□□□ 1.92
SCARB1-206ENST00000539320 SIRT2Q8IXJ6 389 aa27.07■■□□□ 1.92
SCARB1-206ENST00000539320 CLASRPQ8N2M8 674 aaKnown RBP27.07■■□□□ 1.92
SCARB1-206ENST00000539320 SLC45A1Q9Y2W3 748 aa27.07■■□□□ 1.92
SCARB1-206ENST00000539320 APBB1O00213 710 aa27.06■■□□□ 1.92
SCARB1-206ENST00000539320 CAP2P40123 477 aa27.06■■□□□ 1.92
SCARB1-206ENST00000539320 DYNLL1P63167 89 aaKnown RBP27.06■■□□□ 1.92
SCARB1-206ENST00000539320 MAGEB6Q8N7X4 407 aa27.06■■□□□ 1.92
SCARB1-206ENST00000539320 ZNF333Q96JL9 665 aa27.06■■□□□ 1.92
SCARB1-206ENST00000539320 ANTXR1Q9H6X2 564 aa27.06■■□□□ 1.92
SCARB1-206ENST00000539320 ECM2O94769 699 aaPredicted RBP27.05■■□□□ 1.92
SCARB1-206ENST00000539320 BCRP11274 1271 aa27.05■■□□□ 1.92
SCARB1-206ENST00000539320 PRMT2P55345 433 aa27.05■■□□□ 1.92
SCARB1-206ENST00000539320 MAP3K12Q12852 859 aa27.05■■□□□ 1.92
SCARB1-206ENST00000539320 RRP1BQ14684 758 aaKnown RBP27.05■■□□□ 1.92
SCARB1-206ENST00000539320 CERS3Q8IU89 383 aa27.05■■□□□ 1.92
SCARB1-206ENST00000539320 TBC1D2Q9BYX2 928 aa27.05■■□□□ 1.92
SCARB1-206ENST00000539320 POTEFA5A3E0 1075 aa27.04■■□□□ 1.92
SCARB1-206ENST00000539320 CTGFP29279 349 aa27.04■■□□□ 1.92
SCARB1-206ENST00000539320 PSMC4P43686 418 aa27.04■■□□□ 1.92
SCARB1-206ENST00000539320 TMED8Q6PL24 325 aaPredicted RBP27.04■■□□□ 1.92
SCARB1-206ENST00000539320 MIGA1Q8NAN2 632 aa27.04■■□□□ 1.92
SCARB1-206ENST00000539320 TRIM47Q96LD4 638 aa27.04■■□□□ 1.92
SCARB1-206ENST00000539320 AGTPBP1Q9UPW5 1226 aa27.04■■□□□ 1.92
SCARB1-206ENST00000539320 CENPFP49454 3210 aa27.03■■□□□ 1.92
SCARB1-206ENST00000539320 LOC285556D6RIA3 1793 aa27.03■■□□□ 1.92
SCARB1-206ENST00000539320 RAB11FIP3O75154 756 aa27.03■■□□□ 1.92
SCARB1-206ENST00000539320 PDE3AQ14432 1141 aa27.03■■□□□ 1.92
SCARB1-206ENST00000539320 NBPF11Q86T75 865 aa27.03■■□□□ 1.92
SCARB1-206ENST00000539320 ZNF280CQ8ND82 737 aa27.03■■□□□ 1.92
SCARB1-206ENST00000539320 TRIM34Q9BYJ4 488 aa27.03■■□□□ 1.92
SCARB1-206ENST00000539320 DNAJC18Q9H819 358 aa27.03■■□□□ 1.92
SCARB1-206ENST00000539320 TNRC18O15417 2968 aaPredicted RBP27.03■■□□□ 1.92
SCARB1-206ENST00000539320 HLA-DOAP06340 250 aa27.02■■□□□ 1.92
SCARB1-206ENST00000539320 IFIT2P09913 472 aaKnown RBP27.02■■□□□ 1.92
SCARB1-206ENST00000539320 SPP2Q13103 211 aa27.02■■□□□ 1.92
SCARB1-206ENST00000539320 CRACR2BQ8N4Y2 399 aaPredicted RBP27.02■■□□□ 1.92
SCARB1-206ENST00000539320 PROCA1Q8NCQ7 364 aaPredicted RBP27.02■■□□□ 1.92
SCARB1-206ENST00000539320 SRRDQ9UH36 339 aa27.02■■□□□ 1.92
SCARB1-206ENST00000539320 SAP30BPQ9UHR5 308 aaKnown RBP27.02■■□□□ 1.92
SCARB1-206ENST00000539320 PALD1Q9ULE6 856 aa27.02■■□□□ 1.92
SCARB1-206ENST00000539320 USP17L5A8MUK1 530 aa27.01■■□□□ 1.91
SCARB1-206ENST00000539320 FMNL1O95466 1100 aaPredicted RBP27.01■■□□□ 1.91
SCARB1-206ENST00000539320 HOXD10P28358 340 aa27.01■■□□□ 1.91
SCARB1-206ENST00000539320 TTF1Q15361 905 aaPredicted RBP27.01■■□□□ 1.91
SCARB1-206ENST00000539320 C20orf194Q5TEA3 1177 aa27.01■■□□□ 1.91
SCARB1-206ENST00000539320 METTL16Q86W50 562 aaKnown RBP27.01■■□□□ 1.91
SCARB1-206ENST00000539320 FOXP4Q8IVH2 680 aaPredicted RBP27.01■■□□□ 1.91
SCARB1-206ENST00000539320 SMCR8Q8TEV9 937 aaPredicted RBP27.01■■□□□ 1.91
SCARB1-206ENST00000539320 PPIL4Q8WUA2 492 aaKnown RBP eCLIP27.01■■□□□ 1.91
SCARB1-206ENST00000539320 AS3MTQ9HBK9 375 aa27.01■■□□□ 1.91
SCARB1-206ENST00000539320 OSBPP22059 807 aa27■■□□□ 1.91
SCARB1-206ENST00000539320 TREML2Q5T2D2 321 aa27■■□□□ 1.91
SCARB1-206ENST00000539320 TMEM106CQ9BVX2 250 aa27■■□□□ 1.91
SCARB1-206ENST00000539320 PNMA3Q9UL41 463 aa27■■□□□ 1.91
SCARB1-206ENST00000539320 MYPNQ86TC9 1320 aa26.99■■□□□ 1.91
SCARB1-206ENST00000539320 MYH1P12882 1939 aa26.99■■□□□ 1.91
SCARB1-206ENST00000539320 ASNSP08243 561 aa26.99■■□□□ 1.91
SCARB1-206ENST00000539320 USP5P45974 858 aa26.99■■□□□ 1.91
SCARB1-206ENST00000539320 FCGRTP55899 365 aa26.99■■□□□ 1.91
SCARB1-206ENST00000539320 SH3TC2Q8TF17 1288 aa26.99■■□□□ 1.91
SCARB1-206ENST00000539320 HMGCS2P54868 508 aa26.98■■□□□ 1.91
SCARB1-206ENST00000539320 SLC4A8Q2Y0W8 1093 aa26.98■■□□□ 1.91
SCARB1-206ENST00000539320 DNAJC2Q99543 621 aaKnown RBP26.98■■□□□ 1.91
SCARB1-206ENST00000539320 BCL11AQ9H165 835 aa26.98■■□□□ 1.91
SCARB1-206ENST00000539320 MGAMO43451 1857 aa26.98■■□□□ 1.91
SCARB1-206ENST00000539320 RAET1EQ8TD07 263 aa26.97■■□□□ 1.91
SCARB1-206ENST00000539320 GINM1Q9NU53 330 aa26.97■■□□□ 1.91
SCARB1-206ENST00000539320 GOLIM4O00461 696 aa26.96■■□□□ 1.91
SCARB1-206ENST00000539320 GDF11O95390 407 aa26.96■■□□□ 1.91
SCARB1-206ENST00000539320 PDE6AP16499 860 aa26.96■■□□□ 1.91
SCARB1-206ENST00000539320 SH3D19Q5HYK7 790 aa26.96■■□□□ 1.91
SCARB1-206ENST00000539320 RIOK1Q9BRS2 568 aaKnown RBP26.96■■□□□ 1.91
SCARB1-206ENST00000539320 WDR18Q9BV38 432 aa26.96■■□□□ 1.91
SCARB1-206ENST00000539320 ZBTB21Q9ULJ3 1066 aa26.96■■□□□ 1.91
SCARB1-206ENST00000539320 BRCA2P51587 3418 aa26.96■■□□□ 1.91
SCARB1-206ENST00000539320 DDX60LQ5H9U9 1706 aaKnown RBP26.96■■□□□ 1.91
SCARB1-206ENST00000539320 PABPC4Q13310 644 aaKnown RBP eCLIP26.95■■□□□ 1.9
SCARB1-206ENST00000539320 PRPF38BQ5VTL8 546 aaKnown RBP26.95■■□□□ 1.9
SCARB1-206ENST00000539320 NAV1Q8NEY1 1877 aa26.94■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 94 ms