RNA–Protein interactions for RNA: ENST00000539204.5

YBX3-207, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 649 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-207ENST00000539204 CCND3P30281 292 aaPredicted RBP15.08■□□□□ 0
YBX3-207ENST00000539204 HMGCS2P54868 508 aa15.08■□□□□ 0
YBX3-207ENST00000539204 DDX10Q13206 875 aaKnown RBP15.08■□□□□ 0
YBX3-207ENST00000539204 PDE3AQ14432 1141 aa15.08■□□□□ 0
YBX3-207ENST00000539204 SHHQ15465 462 aa15.08■□□□□ 0
YBX3-207ENST00000539204 TJAP1Q5JTD0 557 aa15.08■□□□□ 0
YBX3-207ENST00000539204 SOCS4Q8WXH5 440 aa15.08■□□□□ 0
YBX3-207ENST00000539204 LPIN2Q92539 896 aa15.08■□□□□ 0
YBX3-207ENST00000539204 TBC1D2Q9BYX2 928 aa15.08■□□□□ 0
YBX3-207ENST00000539204 GNL3LQ9NVN8 582 aaKnown RBP15.08■□□□□ 0
YBX3-207ENST00000539204 TBC1D12O60347 775 aa15.07■□□□□ 0
YBX3-207ENST00000539204 SMAD3P84022 425 aaKnown RBP15.07■□□□□ 0
YBX3-207ENST00000539204 RABL6Q3YEC7 729 aaPredicted RBP15.07■□□□□ 0
YBX3-207ENST00000539204 CCAR1Q8IX12 1150 aaKnown RBP15.07■□□□□ 0
YBX3-207ENST00000539204 GPRC5AQ8NFJ5 357 aa15.07■□□□□ 0
YBX3-207ENST00000539204 TTYH1Q9H313 450 aaPredicted RBP15.07■□□□□ 0
YBX3-207ENST00000539204 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.07■□□□□ 04e-26■■■□□ 16.2
YBX3-207ENST00000539204 IL16Q14005 1332 aa15.07■□□□□ 0
YBX3-207ENST00000539204 RGS2P41220 211 aa15.06■□□□□ 0
YBX3-207ENST00000539204 ATN1P54259 1190 aaPredicted RBP15.06■□□□□ 0
YBX3-207ENST00000539204 PICALMQ13492 652 aa15.06■□□□□ 0
YBX3-207ENST00000539204 KLHDC4Q8TBB5 520 aa15.06■□□□□ 0
YBX3-207ENST00000539204 FAM122AQ96E09 287 aa15.06■□□□□ 0
YBX3-207ENST00000539204 P2RX7Q99572 595 aaKnown RBP15.06■□□□□ 0
YBX3-207ENST00000539204 OSBPL5Q9H0X9 879 aaPredicted RBP15.06■□□□□ 0
YBX3-207ENST00000539204 RAPGEFL1Q9UHV5 662 aa15.06■□□□□ 0
YBX3-207ENST00000539204 CACNA1FO60840 1977 aa15.05■□□□□ 0
YBX3-207ENST00000539204 MAPK4P31152 587 aa15.05■□□□□ -0
YBX3-207ENST00000539204 PLA2G5P39877 138 aa15.05■□□□□ -0
YBX3-207ENST00000539204 IRX3P78415 501 aaPredicted RBP15.05■□□□□ -0
YBX3-207ENST00000539204 SH3D19Q5HYK7 790 aa15.05■□□□□ -0
YBX3-207ENST00000539204 SLF2Q8IX21 1173 aa15.05■□□□□ -0
YBX3-207ENST00000539204 DENND2AQ9ULE3 1009 aa15.05■□□□□ -0
YBX3-207ENST00000539204 PTPRFP10586 1907 aa15.04■□□□□ -0
YBX3-207ENST00000539204 UTYO14607 1347 aa15.04■□□□□ -0
YBX3-207ENST00000539204 SALL1Q9NSC2 1324 aa15.04■□□□□ -0
YBX3-207ENST00000539204 USP17L5A8MUK1 530 aa15.04■□□□□ -0
YBX3-207ENST00000539204 EXOSC9Q06265 439 aaKnown RBP15.04■□□□□ -0
YBX3-207ENST00000539204 CCL14Q16627 93 aa15.04■□□□□ -0
YBX3-207ENST00000539204 C9orf50Q5SZB4 431 aa15.04■□□□□ -0
YBX3-207ENST00000539204 ZGPATQ8N5A5 531 aaKnown RBP15.04■□□□□ -0
YBX3-207ENST00000539204 USP6NLQ92738 828 aa15.04■□□□□ -0
YBX3-207ENST00000539204 AS3MTQ9HBK9 375 aa15.04■□□□□ -0
YBX3-207ENST00000539204 DDX4Q9NQI0 724 aaKnown RBP15.04■□□□□ -0
YBX3-207ENST00000539204 FANCIQ9NVI1 1328 aa15.03■□□□□ -0
YBX3-207ENST00000539204 HOXA7P31268 230 aaPredicted RBP15.03■□□□□ -0
YBX3-207ENST00000539204 RTP1P59025 263 aa15.03■□□□□ -0
YBX3-207ENST00000539204 MORN1Q5T089 497 aa15.03■□□□□ -0
YBX3-207ENST00000539204 ANKRD44Q8N8A2 993 aa15.03■□□□□ -0
YBX3-207ENST00000539204 TXNRD2Q9NNW7 524 aa15.03■□□□□ -0
YBX3-207ENST00000539204 GAKO14976 1311 aa15.02■□□□□ -0
YBX3-207ENST00000539204 PHIPQ8WWQ0 1821 aa15.02■□□□□ -0
YBX3-207ENST00000539204 TMEM265A0A087WTH1 108 aa15.02■□□□□ -0
YBX3-207ENST00000539204 EYA2O00167 538 aa15.02■□□□□ -0
YBX3-207ENST00000539204 SEMA3EO15041 775 aa15.02■□□□□ -0
YBX3-207ENST00000539204 MSCO60682 206 aa15.02■□□□□ -0
YBX3-207ENST00000539204 PEX10O60683 326 aa15.02■□□□□ -0
YBX3-207ENST00000539204 CNGA1P29973 690 aa15.02■□□□□ -0
YBX3-207ENST00000539204 CAP2P40123 477 aa15.02■□□□□ -0
YBX3-207ENST00000539204 Q3C1V9 767 aa15.02■□□□□ -0
YBX3-207ENST00000539204 MFSD14CQ5VZR4 134 aa15.02■□□□□ -0
YBX3-207ENST00000539204 GPR142Q7Z601 462 aa15.02■□□□□ -0
YBX3-207ENST00000539204 PLEKHH3Q7Z736 793 aa15.02■□□□□ -0
YBX3-207ENST00000539204 LPAR1Q92633 364 aa15.02■□□□□ -0
YBX3-207ENST00000539204 BADQ92934 168 aa15.02■□□□□ -0
YBX3-207ENST00000539204 FAM163AQ96GL9 167 aaPredicted RBP15.02■□□□□ -0
YBX3-207ENST00000539204 CWC22Q9HCG8 908 aaKnown RBP15.02■□□□□ -0
YBX3-207ENST00000539204 TMOD4Q9NZQ9 345 aa15.02■□□□□ -0
YBX3-207ENST00000539204 RBPJLQ9UBG7 517 aa15.02■□□□□ -0
YBX3-207ENST00000539204 ATP11BQ9Y2G3 1177 aa15.02■□□□□ -0
YBX3-207ENST00000539204 FAM196BA6NMK8 535 aa15.01□□□□□ -0.01
YBX3-207ENST00000539204 DNM1LO00429 736 aa15.01□□□□□ -0.01
YBX3-207ENST00000539204 BTDP43251 543 aa15.01□□□□□ -0.01
YBX3-207ENST00000539204 BACE1P56817 501 aa15.01□□□□□ -0.01
YBX3-207ENST00000539204 HERVK_113P62684 666 aa15.01□□□□□ -0.01
YBX3-207ENST00000539204 DZIP1Q86YF9 867 aaKnown RBP15.01□□□□□ -0.01
YBX3-207ENST00000539204 EDC3Q96F86 508 aaKnown RBP15.01□□□□□ -0.01
YBX3-207ENST00000539204 APBA2Q99767 749 aa15.01□□□□□ -0.01
YBX3-207ENST00000539204 PRKRIP1Q9H875 184 aaPredicted RBP15.01□□□□□ -0.01
YBX3-207ENST00000539204 PRDM5Q9NQX1 630 aaPredicted RBP15.01□□□□□ -0.01
YBX3-207ENST00000539204 DDX20Q9UHI6 824 aaKnown RBP15.01□□□□□ -0.01
YBX3-207ENST00000539204 PLXNB2O15031 1838 aa15.01□□□□□ -0.01
YBX3-207ENST00000539204 DOCK1Q14185 1865 aa15□□□□□ -0.01
YBX3-207ENST00000539204 NPM3O75607 178 aaKnown RBP15□□□□□ -0.01
YBX3-207ENST00000539204 ERVK-9P63128 1117 aa15□□□□□ -0.01
YBX3-207ENST00000539204 ERVK-24P63145 666 aa15□□□□□ -0.01
YBX3-207ENST00000539204 SLC39A5Q6ZMH5 540 aa15□□□□□ -0.01
YBX3-207ENST00000539204 WDR18Q9BV38 432 aa15□□□□□ -0.01
YBX3-207ENST00000539204 PORCNQ9H237 461 aa15□□□□□ -0.01
YBX3-207ENST00000539204 ABCF2Q9UG63 623 aa15□□□□□ -0.01
YBX3-207ENST00000539204 DOCK2Q92608 1830 aa15□□□□□ -0.01
YBX3-207ENST00000539204 C19orf81C9J6K1 198 aa14.99□□□□□ -0.01
YBX3-207ENST00000539204 GLRX3O76003 335 aaKnown RBP14.99□□□□□ -0.01
YBX3-207ENST00000539204 MAP2K5Q13163 448 aa14.99□□□□□ -0.01
YBX3-207ENST00000539204 MTMR2Q13614 643 aa14.99□□□□□ -0.01
YBX3-207ENST00000539204 ATP2B3Q16720 1220 aa14.99□□□□□ -0.01
YBX3-207ENST00000539204 SPTY2D1Q68D10 685 aaPredicted RBP14.99□□□□□ -0.01
YBX3-207ENST00000539204 ARRDC4Q8NCT1 418 aa14.99□□□□□ -0.01
YBX3-207ENST00000539204 GTF3C2Q8WUA4 911 aaPredicted RBP14.99□□□□□ -0.01
YBX3-207ENST00000539204 ATXN2LQ8WWM7 1075 aaKnown RBP14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms