RNA–Protein interactions for RNA: ENST00000538696.5

CLN6-202, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-202ENST00000538696 RABEP1Q15276 862 aa20.48■□□□□ 0.87
CLN6-202ENST00000538696 C12orf60Q5U649 245 aa20.48■□□□□ 0.87
CLN6-202ENST00000538696 CSRNP1Q96S65 589 aa20.48■□□□□ 0.87
CLN6-202ENST00000538696 U3KPZ7 1027 aaPredicted RBP20.48■□□□□ 0.87
CLN6-202ENST00000538696 ATAD5Q96QE3 1844 aa20.47■□□□□ 0.87
CLN6-202ENST00000538696 HLA-DOAP06340 250 aa20.47■□□□□ 0.87
CLN6-202ENST00000538696 SLURP2P0DP57 97 aa20.47■□□□□ 0.87
CLN6-202ENST00000538696 FMR1Q06787 632 aaKnown RBP eCLIP20.47■□□□□ 0.87
CLN6-202ENST00000538696 TTC6Q86TZ1 520 aa20.47■□□□□ 0.87
CLN6-202ENST00000538696 RBM46Q8TBY0 533 aaKnown RBP20.47■□□□□ 0.87
CLN6-202ENST00000538696 IL17RAQ96F46 866 aa20.47■□□□□ 0.87
CLN6-202ENST00000538696 TBC1D2Q9BYX2 928 aa20.47■□□□□ 0.87
CLN6-202ENST00000538696 MINDY4BA8MYZ0 360 aa20.46■□□□□ 0.87
CLN6-202ENST00000538696 TOMM70O94826 608 aa20.46■□□□□ 0.87
CLN6-202ENST00000538696 ITGBL1O95965 494 aaPredicted RBP20.46■□□□□ 0.87
CLN6-202ENST00000538696 ANAPC15P60006 121 aa20.46■□□□□ 0.87
CLN6-202ENST00000538696 PPARAQ07869 468 aa20.46■□□□□ 0.87
CLN6-202ENST00000538696 BECN1Q14457 450 aa20.46■□□□□ 0.87
CLN6-202ENST00000538696 AMOTL1Q8IY63 956 aa20.46■□□□□ 0.87
CLN6-202ENST00000538696 SMC1BQ8NDV3 1235 aa20.46■□□□□ 0.87
CLN6-202ENST00000538696 EHD4Q9H223 541 aa20.46■□□□□ 0.87
CLN6-202ENST00000538696 PI4KBQ9UBF8 816 aa20.46■□□□□ 0.87
CLN6-202ENST00000538696 CTNNA3Q9UI47 895 aa20.46■□□□□ 0.87
CLN6-202ENST00000538696 HAND2P61296 217 aa20.45■□□□□ 0.86
CLN6-202ENST00000538696 RASEFQ8IZ41 740 aa20.45■□□□□ 0.86
CLN6-202ENST00000538696 NBPF3Q9H094 633 aa20.45■□□□□ 0.86
CLN6-202ENST00000538696 DNAJC18Q9H819 358 aa20.45■□□□□ 0.86
CLN6-202ENST00000538696 SNX14Q9Y5W7 946 aa20.45■□□□□ 0.86
CLN6-202ENST00000538696 DOCK1Q14185 1865 aa20.44■□□□□ 0.86
CLN6-202ENST00000538696 FAM196BA6NMK8 535 aa20.44■□□□□ 0.86
CLN6-202ENST00000538696 CTDSPL2Q05D32 466 aa20.44■□□□□ 0.86
CLN6-202ENST00000538696 GABPAQ06546 454 aa20.44■□□□□ 0.86
CLN6-202ENST00000538696 NECTIN1Q15223 517 aa20.44■□□□□ 0.86
CLN6-202ENST00000538696 KCNB2Q92953 911 aa20.44■□□□□ 0.86
CLN6-202ENST00000538696 SNX21Q969T3 373 aa20.44■□□□□ 0.86
CLN6-202ENST00000538696 DYNLL2Q96FJ2 89 aa20.44■□□□□ 0.86
CLN6-202ENST00000538696 ANAPC4Q9UJX5 808 aa20.44■□□□□ 0.86
CLN6-202ENST00000538696 TACC3Q9Y6A5 838 aa20.44■□□□□ 0.86
CLN6-202ENST00000538696 CD2BP2O95400 341 aaKnown RBP20.43■□□□□ 0.86
CLN6-202ENST00000538696 CYP21A2P08686 494 aa20.43■□□□□ 0.86
CLN6-202ENST00000538696 SUPT20HL1Q3ZLR7 823 aa20.43■□□□□ 0.86
CLN6-202ENST00000538696 CREB3L3Q68CJ9 461 aa20.43■□□□□ 0.86
CLN6-202ENST00000538696 METTL16Q86W50 562 aaKnown RBP20.43■□□□□ 0.86
CLN6-202ENST00000538696 TBC1D10CQ8IV04 446 aa20.43■□□□□ 0.86
CLN6-202ENST00000538696 STK11IPQ8N1F8 1099 aa20.43■□□□□ 0.86
CLN6-202ENST00000538696 SERPINB13Q9UIV8 391 aa20.43■□□□□ 0.86
CLN6-202ENST00000538696 PASKQ96RG2 1323 aa20.43■□□□□ 0.86
CLN6-202ENST00000538696 GREB1LQ9C091 1923 aaPredicted RBP20.42■□□□□ 0.86
CLN6-202ENST00000538696 SLC27A2O14975 620 aa20.42■□□□□ 0.86
CLN6-202ENST00000538696 TBC1D12O60347 775 aa20.42■□□□□ 0.86
CLN6-202ENST00000538696 MAP3K10Q02779 954 aa20.42■□□□□ 0.86
CLN6-202ENST00000538696 IMMTQ16891 758 aaKnown RBP20.42■□□□□ 0.86
CLN6-202ENST00000538696 C16orf86Q6ZW13 317 aa20.42■□□□□ 0.86
CLN6-202ENST00000538696 MIGA2Q7L4E1 593 aa20.42■□□□□ 0.86
CLN6-202ENST00000538696 FOXP4Q8IVH2 680 aaPredicted RBP20.42■□□□□ 0.86
CLN6-202ENST00000538696 HSCBQ8IWL3 235 aa20.42■□□□□ 0.86
CLN6-202ENST00000538696 SLC44A5Q8NCS7 719 aa20.42■□□□□ 0.86
CLN6-202ENST00000538696 FZD1Q9UP38 647 aa20.42■□□□□ 0.86
CLN6-202ENST00000538696 TAF6LQ9Y6J9 622 aa20.42■□□□□ 0.86
CLN6-202ENST00000538696 ZNF213O14771 459 aa20.41■□□□□ 0.86
CLN6-202ENST00000538696 CRACR2BQ8N4Y2 399 aaPredicted RBP20.41■□□□□ 0.86
CLN6-202ENST00000538696 HOOK2Q96ED9 719 aa20.41■□□□□ 0.86
CLN6-202ENST00000538696 ZNF408Q9H9D4 720 aa20.41■□□□□ 0.86
CLN6-202ENST00000538696 HERC5Q9UII4 1024 aaKnown RBP20.41■□□□□ 0.86
CLN6-202ENST00000538696 SHMT1P34896 483 aa20.4■□□□□ 0.86
CLN6-202ENST00000538696 NF2P35240 595 aa20.4■□□□□ 0.86
CLN6-202ENST00000538696 FSTL1Q12841 308 aa20.4■□□□□ 0.86
CLN6-202ENST00000538696 DCAF15Q66K64 600 aa20.4■□□□□ 0.86
CLN6-202ENST00000538696 ZNF341Q9BYN7 854 aa20.4■□□□□ 0.86
CLN6-202ENST00000538696 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.4■□□□□ 0.86
CLN6-202ENST00000538696 DAXXQ9UER7 740 aaPredicted RBP20.4■□□□□ 0.86
CLN6-202ENST00000538696 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.4■□□□□ 0.867e-6■■■■■ 33.6
CLN6-202ENST00000538696 CDK8P49336 464 aa20.39■□□□□ 0.85
CLN6-202ENST00000538696 PRKG1Q13976 671 aa20.39■□□□□ 0.85
CLN6-202ENST00000538696 STOX1Q6ZVD7 989 aa20.39■□□□□ 0.85
CLN6-202ENST00000538696 STAG1Q8WVM7 1258 aa20.39■□□□□ 0.85
CLN6-202ENST00000538696 TRIM34Q9BYJ4 488 aa20.39■□□□□ 0.85
CLN6-202ENST00000538696 INCENPQ9NQS7 918 aa20.39■□□□□ 0.85
CLN6-202ENST00000538696 SWAP70Q9UH65 585 aa20.39■□□□□ 0.85
CLN6-202ENST00000538696 TAOK2Q9UL54 1235 aa20.39■□□□□ 0.85
CLN6-202ENST00000538696 CELF2O95319 508 aaKnown RBP20.38■□□□□ 0.85
CLN6-202ENST00000538696 SLC3A2P08195 630 aaKnown RBP20.38■□□□□ 0.85
CLN6-202ENST00000538696 RRP1BQ14684 758 aaKnown RBP20.38■□□□□ 0.85
CLN6-202ENST00000538696 AKNAD1Q5T1N1 836 aa20.38■□□□□ 0.85
CLN6-202ENST00000538696 TATDN1Q6P1N9 297 aa20.38■□□□□ 0.85
CLN6-202ENST00000538696 MOB2Q70IA6 237 aa20.38■□□□□ 0.85
CLN6-202ENST00000538696 NEDD4P46934 1319 aa20.38■□□□□ 0.85
CLN6-202ENST00000538696 PHF20L1A8MW92 1017 aa20.37■□□□□ 0.85
CLN6-202ENST00000538696 USP2O75604 605 aaPredicted RBP20.37■□□□□ 0.85
CLN6-202ENST00000538696 PRDM1O75626 825 aa20.37■□□□□ 0.85
CLN6-202ENST00000538696 FGRP09769 529 aa20.37■□□□□ 0.85
CLN6-202ENST00000538696 UPF3BQ9BZI7 483 aaKnown RBP20.37■□□□□ 0.85
CLN6-202ENST00000538696 ZNF112Q9UJU3 913 aa20.37■□□□□ 0.85
CLN6-202ENST00000538696 PHIPQ8WWQ0 1821 aa20.37■□□□□ 0.85
CLN6-202ENST00000538696 ORC4O43929 436 aa20.36■□□□□ 0.85
CLN6-202ENST00000538696 RASA1P20936 1047 aa20.36■□□□□ 0.85
CLN6-202ENST00000538696 PDE4BQ07343 736 aa20.36■□□□□ 0.85
CLN6-202ENST00000538696 ADCK5Q3MIX3 580 aa20.36■□□□□ 0.85
CLN6-202ENST00000538696 RNF20Q5VTR2 975 aa20.36■□□□□ 0.85
CLN6-202ENST00000538696 CST9Q5W186 159 aa20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms