RNA–Protein interactions for RNA: ENST00000538596.6

CPNE8-203, Transcript of copine 8, humanhuman

TSL 1 (best) BASIC

Gene CPNE8, Length 2,875 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-203ENST00000538596 ELF2Q15723 593 aa13.77□□□□□ -0.21
CPNE8-203ENST00000538596 PCDHB6Q9Y5E3 794 aa13.77□□□□□ -0.21
CPNE8-203ENST00000538596 hCG_1642624A0A1W2PR95 340 aa13.77□□□□□ -0.21
CPNE8-203ENST00000538596 ADAMTS2O95450 1211 aa13.77□□□□□ -0.21
CPNE8-203ENST00000538596 IFNAR1P17181 557 aa13.77□□□□□ -0.21
CPNE8-203ENST00000538596 WTAPQ15007 396 aa13.77□□□□□ -0.21
CPNE8-203ENST00000538596 RTN1Q16799 776 aa13.77□□□□□ -0.21
CPNE8-203ENST00000538596 PDILTQ8N807 584 aa13.77□□□□□ -0.21
CPNE8-203ENST00000538596 KRI1Q8N9T8 703 aaKnown RBP13.77□□□□□ -0.21
CPNE8-203ENST00000538596 FAM237AA0A1B0GTK4 181 aa13.76□□□□□ -0.21
CPNE8-203ENST00000538596 MINDY4BA8MYZ0 360 aa13.76□□□□□ -0.21
CPNE8-203ENST00000538596 EXOC5O00471 708 aa13.76□□□□□ -0.21
CPNE8-203ENST00000538596 USP49Q70CQ1 688 aa13.76□□□□□ -0.21
CPNE8-203ENST00000538596 ACSBG1Q96GR2 724 aa13.76□□□□□ -0.21
CPNE8-203ENST00000538596 KCND1Q9NSA2 647 aa13.76□□□□□ -0.21
CPNE8-203ENST00000538596 LRP2BPQ9P2M1 347 aa13.76□□□□□ -0.21
CPNE8-203ENST00000538596 FAM205CA6NFA0 338 aa13.76□□□□□ -0.21
CPNE8-203ENST00000538596 POLR2DO15514 142 aaKnown RBP13.76□□□□□ -0.21
CPNE8-203ENST00000538596 KMT5BQ4FZB7 885 aa13.76□□□□□ -0.21
CPNE8-203ENST00000538596 KRT23Q9C075 422 aa13.76□□□□□ -0.21
CPNE8-203ENST00000538596 INTS13Q9NVM9 706 aa13.76□□□□□ -0.21
CPNE8-203ENST00000538596 ZHX1Q9UKY1 873 aaPredicted RBP13.76□□□□□ -0.21
CPNE8-203ENST00000538596 EIF5P55010 431 aaKnown RBP13.75□□□□□ -0.21
CPNE8-203ENST00000538596 MDM2Q00987 491 aaPredicted RBP13.75□□□□□ -0.21
CPNE8-203ENST00000538596 INTS5Q6P9B9 1019 aaKnown RBP13.75□□□□□ -0.21
CPNE8-203ENST00000538596 SHISA4Q96DD7 197 aa13.75□□□□□ -0.21
CPNE8-203ENST00000538596 CNNM2Q9H8M5 875 aa13.75□□□□□ -0.21
CPNE8-203ENST00000538596 ABCF2Q9UG63 623 aa13.75□□□□□ -0.21
CPNE8-203ENST00000538596 SERTAD1Q9UHV2 236 aa13.75□□□□□ -0.21
CPNE8-203ENST00000538596 STK36Q9NRP7 1315 aa13.75□□□□□ -0.21
CPNE8-203ENST00000538596 NUTM2BA6NNL0 878 aaPredicted RBP13.75□□□□□ -0.21
CPNE8-203ENST00000538596 NUTM2EB1AL46 878 aaPredicted RBP13.75□□□□□ -0.21
CPNE8-203ENST00000538596 FMR1Q06787 632 aaKnown RBP eCLIP13.75□□□□□ -0.21
CPNE8-203ENST00000538596 OLFM4Q6UX06 510 aa13.75□□□□□ -0.21
CPNE8-203ENST00000538596 NUTM2AQ8IVF1 878 aaPredicted RBP13.75□□□□□ -0.21
CPNE8-203ENST00000538596 TRMT44Q8IYL2 757 aaKnown RBP13.75□□□□□ -0.21
CPNE8-203ENST00000538596 STAG1Q8WVM7 1258 aa13.75□□□□□ -0.21
CPNE8-203ENST00000538596 UTP14AQ9BVJ6 771 aaKnown RBP13.75□□□□□ -0.21
CPNE8-203ENST00000538596 CGNQ9P2M7 1197 aaKnown RBP13.75□□□□□ -0.21
CPNE8-203ENST00000538596 FBXO2Q9UK22 296 aaPredicted RBP13.75□□□□□ -0.21
CPNE8-203ENST00000538596 COL4A1P02462 1669 aa13.75□□□□□ -0.21
CPNE8-203ENST00000538596 CYP2D7A0A087X1C5 515 aa13.74□□□□□ -0.21
CPNE8-203ENST00000538596 CRACR2BQ8N4Y2 399 aaPredicted RBP13.74□□□□□ -0.21
CPNE8-203ENST00000538596 DISP2A7MBM2 1401 aa13.74□□□□□ -0.21
CPNE8-203ENST00000538596 LRP5O75197 1615 aa13.74□□□□□ -0.21
CPNE8-203ENST00000538596 LTBP4Q8N2S1 1624 aa13.74□□□□□ -0.21
CPNE8-203ENST00000538596 SLU7O95391 586 aaKnown RBP13.74□□□□□ -0.21
CPNE8-203ENST00000538596 CHRNDQ07001 517 aa13.74□□□□□ -0.21
CPNE8-203ENST00000538596 SAFBQ15424 915 aaKnown RBP eCLIP13.74□□□□□ -0.21
CPNE8-203ENST00000538596 FBXO38Q6PIJ6 1188 aa13.74□□□□□ -0.21
CPNE8-203ENST00000538596 TRIM22Q8IYM9 498 aa13.74□□□□□ -0.21
CPNE8-203ENST00000538596 NACAP1Q9BZK3 213 aa13.74□□□□□ -0.21
CPNE8-203ENST00000538596 CABP5Q9NP86 173 aa13.74□□□□□ -0.21
CPNE8-203ENST00000538596 MAN1B1Q9UKM7 699 aa13.74□□□□□ -0.21
CPNE8-203ENST00000538596 DOCK2Q92608 1830 aa13.73□□□□□ -0.21
CPNE8-203ENST00000538596 PSDA5PKW4 1024 aaPredicted RBP13.73□□□□□ -0.21
CPNE8-203ENST00000538596 FANCGO15287 622 aa13.73□□□□□ -0.21
CPNE8-203ENST00000538596 CYP7A1P22680 504 aa13.73□□□□□ -0.21
CPNE8-203ENST00000538596 CRKLP46109 303 aaKnown RBP13.73□□□□□ -0.21
CPNE8-203ENST00000538596 PPARAQ07869 468 aa13.73□□□□□ -0.21
CPNE8-203ENST00000538596 DMTNQ08495 405 aa13.73□□□□□ -0.21
CPNE8-203ENST00000538596 HOMER1Q86YM7 354 aa13.73□□□□□ -0.21
CPNE8-203ENST00000538596 VSTM4Q8IW00 320 aa13.73□□□□□ -0.21
CPNE8-203ENST00000538596 ZNF654Q8IZM8 581 aa13.73□□□□□ -0.21
CPNE8-203ENST00000538596 FANCBQ8NB91 859 aa13.73□□□□□ -0.21
CPNE8-203ENST00000538596 RGS22Q8NE09 1264 aa13.73□□□□□ -0.21
CPNE8-203ENST00000538596 ERO1AQ96HE7 468 aa13.73□□□□□ -0.21
CPNE8-203ENST00000538596 PRDM1O75626 825 aa13.73□□□□□ -0.21
CPNE8-203ENST00000538596 PTPREP23469 700 aa13.73□□□□□ -0.21
CPNE8-203ENST00000538596 ATP6V1AP38606 617 aa13.73□□□□□ -0.21
CPNE8-203ENST00000538596 GYG1P46976 350 aa13.73□□□□□ -0.21
CPNE8-203ENST00000538596 SART3Q15020 963 aaKnown RBP13.73□□□□□ -0.21
CPNE8-203ENST00000538596 POSTNQ15063 836 aa13.73□□□□□ -0.21
CPNE8-203ENST00000538596 ERCC6LQ2NKX8 1250 aa13.73□□□□□ -0.21
CPNE8-203ENST00000538596 NIP7Q9Y221 180 aaKnown RBP eCLIP13.73□□□□□ -0.21
CPNE8-203ENST00000538596 ARAP2Q8WZ64 1704 aa13.73□□□□□ -0.21
CPNE8-203ENST00000538596 ERICH2A1L162 156 aa13.73□□□□□ -0.21
CPNE8-203ENST00000538596 TOP1P11387 765 aaKnown RBP13.73□□□□□ -0.21
CPNE8-203ENST00000538596 IGHMBP2P38935 993 aaKnown RBP13.73□□□□□ -0.21
CPNE8-203ENST00000538596 EVX2Q03828 476 aa13.73□□□□□ -0.21
CPNE8-203ENST00000538596 EARS2Q5JPH6 523 aaKnown RBP13.73□□□□□ -0.21
CPNE8-203ENST00000538596 WASF1Q92558 559 aa13.73□□□□□ -0.21
CPNE8-203ENST00000538596 MED15Q96RN5 788 aa13.73□□□□□ -0.21
CPNE8-203ENST00000538596 FEZ1Q99689 392 aa13.73□□□□□ -0.21
CPNE8-203ENST00000538596 VPS54Q9P1Q0 977 aa13.73□□□□□ -0.21
CPNE8-203ENST00000538596 DNAI1Q9UI46 699 aa13.73□□□□□ -0.21
CPNE8-203ENST00000538596 CASP1P29466 404 aa13.72□□□□□ -0.21
CPNE8-203ENST00000538596 FAM177A1Q8N128 213 aaPredicted RBP13.72□□□□□ -0.21
CPNE8-203ENST00000538596 UBAC1Q9BSL1 405 aa13.72□□□□□ -0.21
CPNE8-203ENST00000538596 CCDC87Q9NVE4 849 aa13.72□□□□□ -0.21
CPNE8-203ENST00000538596 OGFRQ9NZT2 677 aa13.72□□□□□ -0.21
CPNE8-203ENST00000538596 BAZ2BQ9UIF8 2168 aaKnown RBP13.72□□□□□ -0.21
CPNE8-203ENST00000538596 DDX41Q9UJV9 622 aaKnown RBP13.72□□□□□ -0.21
CPNE8-203ENST00000538596 TNKSO95271 1327 aa13.72□□□□□ -0.21
CPNE8-203ENST00000538596 PNPLA7Q6ZV29 1317 aa13.72□□□□□ -0.21
CPNE8-203ENST00000538596 WNT7AO00755 349 aa13.72□□□□□ -0.21
CPNE8-203ENST00000538596 CAMTA2O94983 1202 aa13.72□□□□□ -0.21
CPNE8-203ENST00000538596 DEXIO95424 95 aa13.72□□□□□ -0.21
CPNE8-203ENST00000538596 CCDC152Q4G0S7 254 aa13.72□□□□□ -0.21
CPNE8-203ENST00000538596 CSRNP2Q9H175 543 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms