RNA–Protein interactions for RNA: ENST00000538570.5

COL4A6-208, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-208ENST00000538570 ZC4H2Q9NQZ6 224 aa11.07□□□□□ -0.64
COL4A6-208ENST00000538570 SYNRGQ9UMZ2 1314 aa11.07□□□□□ -0.64
COL4A6-208ENST00000538570 GBP5Q96PP8 586 aa11.07□□□□□ -0.64
COL4A6-208ENST00000538570 HAUS7Q99871 368 aa11.07□□□□□ -0.64
COL4A6-208ENST00000538570 KDM5BQ9UGL1 1544 aa11.07□□□□□ -0.64
COL4A6-208ENST00000538570 LDHBP07195 334 aaKnown RBP11.07□□□□□ -0.64
COL4A6-208ENST00000538570 USP26Q9BXU7 913 aa11.07□□□□□ -0.64
COL4A6-208ENST00000538570 SMTNP53814 917 aa11.07□□□□□ -0.64
COL4A6-208ENST00000538570 ARMCX6Q7L4S7 300 aa11.07□□□□□ -0.64
COL4A6-208ENST00000538570 USP6NLQ92738 828 aa11.07□□□□□ -0.64
COL4A6-208ENST00000538570 TBC1D31Q96DN5 1066 aa11.07□□□□□ -0.64
COL4A6-208ENST00000538570 CAPN7Q9Y6W3 813 aa11.07□□□□□ -0.64
COL4A6-208ENST00000538570 RPS6KB1P23443 525 aa11.06□□□□□ -0.64
COL4A6-208ENST00000538570 BAIAP2L1Q9UHR4 511 aa11.06□□□□□ -0.64
COL4A6-208ENST00000538570 LOC102724159A0A0B4J2E5 919 aa11.06□□□□□ -0.64
COL4A6-208ENST00000538570 ATP10BO94823 1461 aa11.06□□□□□ -0.64
COL4A6-208ENST00000538570 DEXIO95424 95 aa11.06□□□□□ -0.64
COL4A6-208ENST00000538570 RNASE9P60153 205 aaKnown RBP11.06□□□□□ -0.64
COL4A6-208ENST00000538570 MAP7Q14244 749 aa11.06□□□□□ -0.64
COL4A6-208ENST00000538570 PWP2Q15269 919 aaKnown RBP11.06□□□□□ -0.64
COL4A6-208ENST00000538570 PLEKHM2Q8IWE5 1019 aa11.06□□□□□ -0.64
COL4A6-208ENST00000538570 CARD6Q9BX69 1037 aa11.06□□□□□ -0.64
COL4A6-208ENST00000538570 ANKRD2Q9GZV1 360 aa11.06□□□□□ -0.64
COL4A6-208ENST00000538570 SMIM24O75264 130 aa11.06□□□□□ -0.64
COL4A6-208ENST00000538570 IRX5P78411 483 aaPredicted RBP11.06□□□□□ -0.64
COL4A6-208ENST00000538570 IMPACTQ9P2X3 320 aa11.06□□□□□ -0.64
COL4A6-208ENST00000538570 FANCCQ00597 558 aa11.06□□□□□ -0.64
COL4A6-208ENST00000538570 SP4Q02446 784 aa11.06□□□□□ -0.64
COL4A6-208ENST00000538570 HHATQ5VTY9 493 aa11.06□□□□□ -0.64
COL4A6-208ENST00000538570 ANO1Q5XXA6 986 aa11.06□□□□□ -0.64
COL4A6-208ENST00000538570 VSIG1Q86XK7 387 aa11.06□□□□□ -0.64
COL4A6-208ENST00000538570 DZIP3Q86Y13 1208 aaKnown RBP11.06□□□□□ -0.64
COL4A6-208ENST00000538570 PLCB1Q9NQ66 1216 aa11.06□□□□□ -0.64
COL4A6-208ENST00000538570 KCNH3Q9ULD8 1083 aa11.06□□□□□ -0.64
COL4A6-208ENST00000538570 ERCC3P19447 782 aa11.06□□□□□ -0.64
COL4A6-208ENST00000538570 PAK1Q13153 545 aa11.06□□□□□ -0.64
COL4A6-208ENST00000538570 HAUS3Q68CZ6 603 aa11.06□□□□□ -0.64
COL4A6-208ENST00000538570 CSGALNACT2Q8N6G5 542 aa11.06□□□□□ -0.64
COL4A6-208ENST00000538570 RNF34Q969K3 372 aa11.06□□□□□ -0.64
COL4A6-208ENST00000538570 USH1CQ9Y6N9 552 aa11.06□□□□□ -0.64
COL4A6-208ENST00000538570 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.05□□□□□ -0.64
COL4A6-208ENST00000538570 GOLGA6BA6NDN3 693 aa11.05□□□□□ -0.64
COL4A6-208ENST00000538570 IRS4O14654 1257 aaPredicted RBP11.05□□□□□ -0.64
COL4A6-208ENST00000538570 SATB1Q01826 763 aa11.05□□□□□ -0.64
COL4A6-208ENST00000538570 ABTB1Q969K4 478 aaPredicted RBP11.05□□□□□ -0.64
COL4A6-208ENST00000538570 ZC3H12CQ9C0D7 883 aaKnown RBP11.05□□□□□ -0.64
COL4A6-208ENST00000538570 PPANQ9NQ55 473 aaKnown RBP11.05□□□□□ -0.64
COL4A6-208ENST00000538570 EXOC7Q9UPT5 735 aa11.05□□□□□ -0.64
COL4A6-208ENST00000538570 TTC36A6NLP5 189 aa11.05□□□□□ -0.64
COL4A6-208ENST00000538570 GIPC1O14908 333 aa11.05□□□□□ -0.64
COL4A6-208ENST00000538570 DAPK3O43293 454 aa11.05□□□□□ -0.64
COL4A6-208ENST00000538570 CHMP2AO43633 222 aa11.05□□□□□ -0.64
COL4A6-208ENST00000538570 CEP104O60308 925 aa11.05□□□□□ -0.64
COL4A6-208ENST00000538570 CLSTN2Q9H4D0 955 aa11.05□□□□□ -0.64
COL4A6-208ENST00000538570 HARSP12081 509 aaKnown RBP11.05□□□□□ -0.64
COL4A6-208ENST00000538570 CABS1Q96KC9 395 aa11.05□□□□□ -0.64
COL4A6-208ENST00000538570 SOS1Q07889 1333 aaPredicted RBP11.05□□□□□ -0.64
COL4A6-208ENST00000538570 CCDC169A6NNP5 214 aa11.05□□□□□ -0.64
COL4A6-208ENST00000538570 CCNT1O60563 726 aaKnown RBP11.05□□□□□ -0.64
COL4A6-208ENST00000538570 SLC9C1Q4G0N8 1177 aa11.05□□□□□ -0.64
COL4A6-208ENST00000538570 PHLDB2Q86SQ0 1253 aa11.05□□□□□ -0.64
COL4A6-208ENST00000538570 STK24Q9Y6E0 443 aa11.05□□□□□ -0.64
COL4A6-208ENST00000538570 I3L4J1 428 aa11.05□□□□□ -0.64
COL4A6-208ENST00000538570 PAK2Q13177 524 aa11.05□□□□□ -0.64
COL4A6-208ENST00000538570 TSC1Q92574 1164 aa11.05□□□□□ -0.64
COL4A6-208ENST00000538570 ACSBG1Q96GR2 724 aa11.05□□□□□ -0.64
COL4A6-208ENST00000538570 TMEM87BQ96K49 555 aa11.05□□□□□ -0.64
COL4A6-208ENST00000538570 LLPHQ9BRT6 129 aaKnown RBP11.05□□□□□ -0.64
COL4A6-208ENST00000538570 ASIC3Q9UHC3 531 aa11.05□□□□□ -0.64
COL4A6-208ENST00000538570 HMGB1P1B2RPK0 211 aaPredicted RBP11.04□□□□□ -0.64
COL4A6-208ENST00000538570 CETN3O15182 167 aa11.04□□□□□ -0.64
COL4A6-208ENST00000538570 TRPC3Q13507 836 aa11.04□□□□□ -0.64
COL4A6-208ENST00000538570 MTMR3Q13615 1198 aa11.04□□□□□ -0.64
COL4A6-208ENST00000538570 PSMD6Q15008 389 aa11.04□□□□□ -0.64
COL4A6-208ENST00000538570 TTC6Q86TZ1 520 aa11.04□□□□□ -0.64
COL4A6-208ENST00000538570 RNF10Q8N5U6 811 aaKnown RBP11.04□□□□□ -0.64
COL4A6-208ENST00000538570 SH2D4AQ9H788 454 aa11.04□□□□□ -0.64
COL4A6-208ENST00000538570 TNRQ92752 1358 aa11.04□□□□□ -0.64
COL4A6-208ENST00000538570 CUTAO60888 179 aa11.04□□□□□ -0.64
COL4A6-208ENST00000538570 MBD4O95243 580 aa11.04□□□□□ -0.64
COL4A6-208ENST00000538570 RANBP1P43487 201 aa11.04□□□□□ -0.64
COL4A6-208ENST00000538570 ZNF75DP51815 510 aa11.04□□□□□ -0.64
COL4A6-208ENST00000538570 LGSNQ5TDP6 509 aa11.04□□□□□ -0.64
COL4A6-208ENST00000538570 TMTC1Q8IUR5 882 aa11.04□□□□□ -0.64
COL4A6-208ENST00000538570 TRIM31Q9BZY9 425 aa11.04□□□□□ -0.64
COL4A6-208ENST00000538570 TSKSQ9UJT2 592 aa11.04□□□□□ -0.64
COL4A6-208ENST00000538570 STRN3Q13033 797 aa11.04□□□□□ -0.64
COL4A6-208ENST00000538570 PDCD7Q8N8D1 485 aaKnown RBP11.04□□□□□ -0.64
COL4A6-208ENST00000538570 MLKLQ8NB16 471 aa11.04□□□□□ -0.64
COL4A6-208ENST00000538570 TACO1Q9BSH4 297 aaKnown RBP11.04□□□□□ -0.64
COL4A6-208ENST00000538570 PKD2L1Q9P0L9 805 aa11.04□□□□□ -0.64
COL4A6-208ENST00000538570 VPS41P49754 854 aa11.04□□□□□ -0.64
COL4A6-208ENST00000538570 NLRP12P59046 1061 aa11.04□□□□□ -0.64
COL4A6-208ENST00000538570 TPTE2Q6XPS3 522 aa11.04□□□□□ -0.64
COL4A6-208ENST00000538570 PIK3AP1Q6ZUJ8 805 aa11.04□□□□□ -0.64
COL4A6-208ENST00000538570 SYCE1Q8N0S2 351 aa11.04□□□□□ -0.64
COL4A6-208ENST00000538570 HELBQ8NG08 1087 aaPredicted RBP11.04□□□□□ -0.64
COL4A6-208ENST00000538570 FBLN1P23142 703 aa11.04□□□□□ -0.64
COL4A6-208ENST00000538570 SIRT1Q96EB6 747 aa11.04□□□□□ -0.64
COL4A6-208ENST00000538570 SLC24A3Q9HC58 644 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 205.3 ms