RNA–Protein interactions for RNA: ENST00000538548.5

SFSWAP-207, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 2,636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-207ENST00000538548 TTF2Q9UNY4 1162 aaKnown RBP21.16■□□□□ 0.98
SFSWAP-207ENST00000538548 AFDNP55196 1824 aaKnown RBP21.16■□□□□ 0.98
SFSWAP-207ENST00000538548 A0A087WZG4 1122 aa21.15■□□□□ 0.98
SFSWAP-207ENST00000538548 A0A0U1RQJ8 604 aa21.15■□□□□ 0.98
SFSWAP-207ENST00000538548 FGAP02671 866 aa21.15■□□□□ 0.98
SFSWAP-207ENST00000538548 WDR93Q6P2C0 686 aa21.15■□□□□ 0.98
SFSWAP-207ENST00000538548 ZNF790Q6PG37 636 aa21.15■□□□□ 0.98
SFSWAP-207ENST00000538548 LMBR1LQ6UX01 489 aa21.15■□□□□ 0.98
SFSWAP-207ENST00000538548 EFCAB13Q8IY85 973 aa21.15■□□□□ 0.98
SFSWAP-207ENST00000538548 ATRIPQ8WXE1 791 aa21.15■□□□□ 0.98
SFSWAP-207ENST00000538548 NAPGQ99747 312 aaPredicted RBP21.15■□□□□ 0.98
SFSWAP-207ENST00000538548 C5P01031 1676 aa21.15■□□□□ 0.98
SFSWAP-207ENST00000538548 CPP00450 1065 aa21.15■□□□□ 0.98
SFSWAP-207ENST00000538548 ERCC5P28715 1186 aaPredicted RBP21.15■□□□□ 0.98
SFSWAP-207ENST00000538548 RBL2Q08999 1139 aa21.15■□□□□ 0.98
SFSWAP-207ENST00000538548 IGSF22Q8N9C0 903 aa21.15■□□□□ 0.98
SFSWAP-207ENST00000538548 MED15Q96RN5 788 aa21.15■□□□□ 0.98
SFSWAP-207ENST00000538548 PHRF1Q9P1Y6 1649 aaKnown RBP21.15■□□□□ 0.98
SFSWAP-207ENST00000538548 LRRIQ3A6PVS8 624 aaPredicted RBP21.14■□□□□ 0.98
SFSWAP-207ENST00000538548 SLC35F6Q8N357 371 aa21.14■□□□□ 0.98
SFSWAP-207ENST00000538548 ZNF335Q9H4Z2 1342 aaPredicted RBP21.14■□□□□ 0.97
SFSWAP-207ENST00000538548 LMTK3Q96Q04 1460 aa21.14■□□□□ 0.97
SFSWAP-207ENST00000538548 ATP2B1P20020 1258 aa21.14■□□□□ 0.97
SFSWAP-207ENST00000538548 AARSP49588 968 aaKnown RBP eCLIP21.14■□□□□ 0.97
SFSWAP-207ENST00000538548 PLCD1P51178 756 aa21.14■□□□□ 0.97
SFSWAP-207ENST00000538548 CASP7P55210 303 aa21.14■□□□□ 0.97
SFSWAP-207ENST00000538548 METAP2P50579 478 aaKnown RBP eCLIP21.13■□□□□ 0.97
SFSWAP-207ENST00000538548 ZNF827Q17R98 1081 aa21.13■□□□□ 0.97
SFSWAP-207ENST00000538548 CPLX2Q6PUV4 134 aaKnown RBP21.13■□□□□ 0.97
SFSWAP-207ENST00000538548 APTXQ7Z2E3 356 aaKnown RBP21.13■□□□□ 0.97
SFSWAP-207ENST00000538548 KCNH5Q8NCM2 988 aa21.13■□□□□ 0.97
SFSWAP-207ENST00000538548 CTCFLQ8NI51 663 aaPredicted RBP21.13■□□□□ 0.97
SFSWAP-207ENST00000538548 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.13■□□□□ 0.97
SFSWAP-207ENST00000538548 MYO1AQ9UBC5 1043 aa21.13■□□□□ 0.97
SFSWAP-207ENST00000538548 ADAMTS7Q9UKP4 1686 aa21.13■□□□□ 0.97
SFSWAP-207ENST00000538548 TEX33O43247 280 aa21.13■□□□□ 0.97
SFSWAP-207ENST00000538548 MFAP3LO75121 409 aa21.13■□□□□ 0.97
SFSWAP-207ENST00000538548 IL15P40933 162 aaPredicted RBP21.13■□□□□ 0.97
SFSWAP-207ENST00000538548 LRP10Q7Z4F1 713 aa21.13■□□□□ 0.97
SFSWAP-207ENST00000538548 RNF40O75150 1001 aa21.12■□□□□ 0.97
SFSWAP-207ENST00000538548 PRR29P0C7W0 189 aa21.12■□□□□ 0.97
SFSWAP-207ENST00000538548 PBX1P40424 430 aa21.12■□□□□ 0.97
SFSWAP-207ENST00000538548 DNAJC21Q5F1R6 531 aaKnown RBP21.12■□□□□ 0.97
SFSWAP-207ENST00000538548 SLC9C2Q5TAH2 1124 aa21.12■□□□□ 0.97
SFSWAP-207ENST00000538548 AFAP1L1Q8TED9 768 aa21.12■□□□□ 0.97
SFSWAP-207ENST00000538548 CCDC51Q96ER9 411 aa21.12■□□□□ 0.97
SFSWAP-207ENST00000538548 ANGEL1Q9UNK9 670 aaKnown RBP21.12■□□□□ 0.97
SFSWAP-207ENST00000538548 STRCP1A6NGW2 1772 aa21.12■□□□□ 0.97
SFSWAP-207ENST00000538548 SLIT3O75094 1523 aa21.12■□□□□ 0.97
SFSWAP-207ENST00000538548 GCP02774 474 aa21.12■□□□□ 0.97
SFSWAP-207ENST00000538548 ZFYP08048 801 aaPredicted RBP21.12■□□□□ 0.97
SFSWAP-207ENST00000538548 TRDNQ13061 729 aa21.12■□□□□ 0.97
SFSWAP-207ENST00000538548 TRIM29Q14134 588 aa21.12■□□□□ 0.97
SFSWAP-207ENST00000538548 CNGA4Q8IV77 575 aa21.12■□□□□ 0.97
SFSWAP-207ENST00000538548 DEF6Q9H4E7 631 aa21.12■□□□□ 0.97
SFSWAP-207ENST00000538548 TFRCP02786 760 aaKnown RBP21.11■□□□□ 0.97
SFSWAP-207ENST00000538548 FECHP22830 423 aa21.11■□□□□ 0.97
SFSWAP-207ENST00000538548 SLC39A6Q13433 755 aa21.11■□□□□ 0.97
SFSWAP-207ENST00000538548 WASHC4Q2M389 1173 aa21.11■□□□□ 0.97
SFSWAP-207ENST00000538548 SPECC1Q5M775 1068 aa21.11■□□□□ 0.97
SFSWAP-207ENST00000538548 SUGP1Q8IWZ8 645 aaKnown RBP21.11■□□□□ 0.97
SFSWAP-207ENST00000538548 CDC5LQ99459 802 aaKnown RBP21.11■□□□□ 0.97
SFSWAP-207ENST00000538548 ZNF213O14771 459 aa21.11■□□□□ 0.97
SFSWAP-207ENST00000538548 POLR2DO15514 142 aaKnown RBP21.11■□□□□ 0.97
SFSWAP-207ENST00000538548 CT47A1Q5JQC4 288 aaPredicted RBP21.11■□□□□ 0.97
SFSWAP-207ENST00000538548 STK11IPQ8N1F8 1099 aa21.11■□□□□ 0.97
SFSWAP-207ENST00000538548 NOA1Q8NC60 698 aaKnown RBP21.11■□□□□ 0.97
SFSWAP-207ENST00000538548 CPLX3Q8WVH0 158 aa21.11■□□□□ 0.97
SFSWAP-207ENST00000538548 NCAPGQ9BPX3 1015 aa21.11■□□□□ 0.97
SFSWAP-207ENST00000538548 ATP5J2-PTCD1G3V325 749 aa21.1■□□□□ 0.97
SFSWAP-207ENST00000538548 PTCD1O75127 700 aaKnown RBP21.1■□□□□ 0.97
SFSWAP-207ENST00000538548 KANK3Q6NY19 840 aa21.1■□□□□ 0.97
SFSWAP-207ENST00000538548 FAM107BQ9H098 131 aa21.1■□□□□ 0.97
SFSWAP-207ENST00000538548 SERTAD1Q9UHV2 236 aa21.1■□□□□ 0.97
SFSWAP-207ENST00000538548 TADA2BQ86TJ2 420 aa21.1■□□□□ 0.97
SFSWAP-207ENST00000538548 SPATA20Q8TB22 786 aa21.1■□□□□ 0.97
SFSWAP-207ENST00000538548 PHKBQ93100 1093 aa21.1■□□□□ 0.97
SFSWAP-207ENST00000538548 CTAGE1Q96RT6 745 aa21.1■□□□□ 0.97
SFSWAP-207ENST00000538548 ADD3Q9UEY8 706 aaKnown RBP21.1■□□□□ 0.97
SFSWAP-207ENST00000538548 AXIN2Q9Y2T1 843 aa21.1■□□□□ 0.97
SFSWAP-207ENST00000538548 C1orf167Q5SNV9 1468 aa21.1■□□□□ 0.97
SFSWAP-207ENST00000538548 A0A087WUV0 522 aaPredicted RBP21.09■□□□□ 0.97
SFSWAP-207ENST00000538548 PRPF6O94906 941 aaKnown RBP21.09■□□□□ 0.97
SFSWAP-207ENST00000538548 SYF2O95926 243 aaKnown RBP21.09■□□□□ 0.97
SFSWAP-207ENST00000538548 FOXO4P98177 505 aa21.09■□□□□ 0.97
SFSWAP-207ENST00000538548 PTPREP23469 700 aa21.09■□□□□ 0.97
SFSWAP-207ENST00000538548 EIF5P55010 431 aaKnown RBP21.09■□□□□ 0.97
SFSWAP-207ENST00000538548 AMPD2Q01433 879 aa21.09■□□□□ 0.97
SFSWAP-207ENST00000538548 SPATA1Q5VX52 437 aa21.09■□□□□ 0.97
SFSWAP-207ENST00000538548 CCDC148Q8NFR7 591 aa21.09■□□□□ 0.97
SFSWAP-207ENST00000538548 DRC1Q96MC2 740 aa21.09■□□□□ 0.97
SFSWAP-207ENST00000538548 WWC3Q9ULE0 1092 aa21.09■□□□□ 0.97
SFSWAP-207ENST00000538548 ANKRD65E5RJM6 399 aa21.08■□□□□ 0.97
SFSWAP-207ENST00000538548 MCM3P25205 808 aa21.08■□□□□ 0.97
SFSWAP-207ENST00000538548 CASP14P31944 242 aa21.08■□□□□ 0.97
SFSWAP-207ENST00000538548 FKBP4Q02790 459 aaKnown RBP eCLIP21.08■□□□□ 0.97
SFSWAP-207ENST00000538548 TMTC1Q8IUR5 882 aa21.08■□□□□ 0.97
SFSWAP-207ENST00000538548 MYCBPQ99417 103 aaPredicted RBP21.08■□□□□ 0.97
SFSWAP-207ENST00000538548 FBXO2Q9UK22 296 aaPredicted RBP21.08■□□□□ 0.97
SFSWAP-207ENST00000538548 MYO6Q9UM54 1294 aa21.08■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 131.8 ms