RNA–Protein interactions for RNA: ENST00000538363.1

TNFRSF1A-211, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-211ENST00000538363 ZNF280AP59817 542 aaPredicted RBP12.58□□□□□ -0.4
TNFRSF1A-211ENST00000538363 ADCK5Q3MIX3 580 aa12.58□□□□□ -0.4
TNFRSF1A-211ENST00000538363 NFXL1Q6ZNB6 911 aa12.58□□□□□ -0.4
TNFRSF1A-211ENST00000538363 DHX32Q7L7V1 743 aaKnown RBP12.58□□□□□ -0.4
TNFRSF1A-211ENST00000538363 ZNF784Q8NCA9 323 aaPredicted RBP12.58□□□□□ -0.4
TNFRSF1A-211ENST00000538363 MTMR14Q8NCE2 650 aa12.58□□□□□ -0.4
TNFRSF1A-211ENST00000538363 KCNB2Q92953 911 aa12.58□□□□□ -0.4
TNFRSF1A-211ENST00000538363 UBAC1Q9BSL1 405 aa12.58□□□□□ -0.4
TNFRSF1A-211ENST00000538363 OSBPL5Q9H0X9 879 aaPredicted RBP12.58□□□□□ -0.4
TNFRSF1A-211ENST00000538363 DHX36Q9H2U1 1008 aaKnown RBP12.58□□□□□ -0.4
TNFRSF1A-211ENST00000538363 BAZ2AQ9UIF9 1905 aaKnown RBP12.57□□□□□ -0.4
TNFRSF1A-211ENST00000538363 IQCA1LA6NCM1 817 aa12.57□□□□□ -0.4
TNFRSF1A-211ENST00000538363 TSPY2A6NKD2 308 aa12.57□□□□□ -0.4
TNFRSF1A-211ENST00000538363 B4E1Z4 1266 aa12.57□□□□□ -0.4
TNFRSF1A-211ENST00000538363 HAX1O00165 279 aa12.57□□□□□ -0.4
TNFRSF1A-211ENST00000538363 WNT10BO00744 389 aa12.57□□□□□ -0.4
TNFRSF1A-211ENST00000538363 CPA1P15085 419 aa12.57□□□□□ -0.4
TNFRSF1A-211ENST00000538363 RPS6KB1P23443 525 aa12.57□□□□□ -0.4
TNFRSF1A-211ENST00000538363 NBPF9Q3BBW0 867 aa12.57□□□□□ -0.4
TNFRSF1A-211ENST00000538363 C12orf60Q5U649 245 aa12.57□□□□□ -0.4
TNFRSF1A-211ENST00000538363 SYNE3Q6ZMZ3 975 aa12.57□□□□□ -0.4
TNFRSF1A-211ENST00000538363 PLCD3Q8N3E9 789 aa12.57□□□□□ -0.4
TNFRSF1A-211ENST00000538363 STAG1Q8WVM7 1258 aa12.57□□□□□ -0.4
TNFRSF1A-211ENST00000538363 DCPSQ96C86 337 aaKnown RBP12.57□□□□□ -0.4
TNFRSF1A-211ENST00000538363 IDI2Q9BXS1 227 aa12.57□□□□□ -0.4
TNFRSF1A-211ENST00000538363 ZSWIM6Q9HCJ5 1215 aa12.57□□□□□ -0.4
TNFRSF1A-211ENST00000538363 ADARB2Q9NS39 739 aaKnown RBP12.57□□□□□ -0.4
TNFRSF1A-211ENST00000538363 HACL1Q9UJ83 578 aa12.57□□□□□ -0.4
TNFRSF1A-211ENST00000538363 ZC3H4Q9UPT8 1303 aaKnown RBP12.57□□□□□ -0.4
TNFRSF1A-211ENST00000538363 MYH1P12882 1939 aa12.56□□□□□ -0.4
TNFRSF1A-211ENST00000538363 SHTN1A0MZ66 631 aa12.56□□□□□ -0.4
TNFRSF1A-211ENST00000538363 GLTPD2A6NH11 291 aa12.56□□□□□ -0.4
TNFRSF1A-211ENST00000538363 IFIT3O14879 490 aaKnown RBP12.56□□□□□ -0.4
TNFRSF1A-211ENST00000538363 FOXP2O15409 715 aa12.56□□□□□ -0.4
TNFRSF1A-211ENST00000538363 PRC1O43663 620 aa12.56□□□□□ -0.4
TNFRSF1A-211ENST00000538363 KDM4AO75164 1064 aa12.56□□□□□ -0.4
TNFRSF1A-211ENST00000538363 PRDM1O75626 825 aa12.56□□□□□ -0.4
TNFRSF1A-211ENST00000538363 WDHD1O75717 1129 aaPredicted RBP12.56□□□□□ -0.4
TNFRSF1A-211ENST00000538363 EPS15P42566 896 aa12.56□□□□□ -0.4
TNFRSF1A-211ENST00000538363 NFIAQ12857 509 aa12.56□□□□□ -0.4
TNFRSF1A-211ENST00000538363 EAPPQ56P03 285 aaPredicted RBP12.56□□□□□ -0.4
TNFRSF1A-211ENST00000538363 Q6ZUG5 572 aa12.56□□□□□ -0.4
TNFRSF1A-211ENST00000538363 IQCA1Q86XH1 822 aa12.56□□□□□ -0.4
TNFRSF1A-211ENST00000538363 TBC1D10CQ8IV04 446 aa12.56□□□□□ -0.4
TNFRSF1A-211ENST00000538363 FAM151AQ8WW52 585 aa12.56□□□□□ -0.4
TNFRSF1A-211ENST00000538363 DYNLL2Q96FJ2 89 aa12.56□□□□□ -0.4
TNFRSF1A-211ENST00000538363 IPO9Q96P70 1041 aaKnown RBP12.56□□□□□ -0.4
TNFRSF1A-211ENST00000538363 PI4KBQ9UBF8 816 aa12.56□□□□□ -0.4
TNFRSF1A-211ENST00000538363 ANAPC4Q9UJX5 808 aa12.56□□□□□ -0.4
TNFRSF1A-211ENST00000538363 NAV1Q8NEY1 1877 aa12.56□□□□□ -0.4
TNFRSF1A-211ENST00000538363 UTRNP46939 3433 aa12.55□□□□□ -0.4
TNFRSF1A-211ENST00000538363 MPHOSPH10O00566 681 aaKnown RBP12.55□□□□□ -0.4
TNFRSF1A-211ENST00000538363 TSPY3P0CV98 308 aa12.55□□□□□ -0.4
TNFRSF1A-211ENST00000538363 TSPY8P0CW00 308 aa12.55□□□□□ -0.4
TNFRSF1A-211ENST00000538363 CCDC178Q5BJE1 867 aa12.55□□□□□ -0.4
TNFRSF1A-211ENST00000538363 TMEM67Q5HYA8 995 aa12.55□□□□□ -0.4
TNFRSF1A-211ENST00000538363 CHST3Q7LGC8 479 aa12.55□□□□□ -0.4
TNFRSF1A-211ENST00000538363 APOBEC3FQ8IUX4 373 aaKnown RBP12.55□□□□□ -0.4
TNFRSF1A-211ENST00000538363 FOXP4Q8IVH2 680 aaPredicted RBP12.55□□□□□ -0.4
TNFRSF1A-211ENST00000538363 HOOK2Q96ED9 719 aa12.55□□□□□ -0.4
TNFRSF1A-211ENST00000538363 ZSCAN31Q96LW9 406 aaPredicted RBP12.55□□□□□ -0.4
TNFRSF1A-211ENST00000538363 TCEANC2Q96MN5 208 aa12.55□□□□□ -0.4
TNFRSF1A-211ENST00000538363 CSRNP1Q96S65 589 aa12.55□□□□□ -0.4
TNFRSF1A-211ENST00000538363 KIF2CQ99661 725 aa12.55□□□□□ -0.4
TNFRSF1A-211ENST00000538363 DDX4Q9NQI0 724 aaKnown RBP12.55□□□□□ -0.4
TNFRSF1A-211ENST00000538363 INCENPQ9NQS7 918 aa12.55□□□□□ -0.4
TNFRSF1A-211ENST00000538363 SWAP70Q9UH65 585 aa12.55□□□□□ -0.4
TNFRSF1A-211ENST00000538363 SERPINB13Q9UIV8 391 aa12.55□□□□□ -0.4
TNFRSF1A-211ENST00000538363 ECM29Q5VYK3 1845 aa12.55□□□□□ -0.4
TNFRSF1A-211ENST00000538363 CCDC69A6NI79 296 aa12.54□□□□□ -0.4
TNFRSF1A-211ENST00000538363 CDK8P49336 464 aa12.54□□□□□ -0.4
TNFRSF1A-211ENST00000538363 PLCD1P51178 756 aa12.54□□□□□ -0.4
TNFRSF1A-211ENST00000538363 AK2P54819 239 aa12.54□□□□□ -0.4
TNFRSF1A-211ENST00000538363 TFAP4Q01664 338 aa12.54□□□□□ -0.4
TNFRSF1A-211ENST00000538363 ANGEL2Q5VTE6 544 aaKnown RBP12.54□□□□□ -0.4
TNFRSF1A-211ENST00000538363 FKBP1CQ5VVH2 108 aa12.54□□□□□ -0.4
TNFRSF1A-211ENST00000538363 STOX1Q6ZVD7 989 aa12.54□□□□□ -0.4
TNFRSF1A-211ENST00000538363 SPRYD3Q8NCJ5 442 aa12.54□□□□□ -0.4
TNFRSF1A-211ENST00000538363 SNX21Q969T3 373 aa12.54□□□□□ -0.4
TNFRSF1A-211ENST00000538363 CHMP4CQ96CF2 233 aa12.54□□□□□ -0.4
TNFRSF1A-211ENST00000538363 TMEM87BQ96K49 555 aa12.54□□□□□ -0.4
TNFRSF1A-211ENST00000538363 LRRC2Q9BYS8 371 aa12.54□□□□□ -0.4
TNFRSF1A-211ENST00000538363 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.54□□□□□ -0.42e-7■■■□□ 17.4
TNFRSF1A-211ENST00000538363 FAM198AQ9UFP1 575 aa12.54□□□□□ -0.4
TNFRSF1A-211ENST00000538363 LIMCH1Q9UPQ0 1083 aa12.54□□□□□ -0.4
TNFRSF1A-211ENST00000538363 TAF6LQ9Y6J9 622 aa12.54□□□□□ -0.4
TNFRSF1A-211ENST00000538363 K7ELQ4 463 aaPredicted RBP12.53□□□□□ -0.4
TNFRSF1A-211ENST00000538363 EPHX2P34913 555 aa12.53□□□□□ -0.4
TNFRSF1A-211ENST00000538363 NT5C2P49902 561 aa12.53□□□□□ -0.4
TNFRSF1A-211ENST00000538363 WTAPQ15007 396 aa12.53□□□□□ -0.4
TNFRSF1A-211ENST00000538363 FAM47AQ5JRC9 791 aa12.53□□□□□ -0.4
TNFRSF1A-211ENST00000538363 FAM83AQ86UY5 434 aa12.53□□□□□ -0.4
TNFRSF1A-211ENST00000538363 SULF1Q8IWU6 871 aa12.53□□□□□ -0.4
TNFRSF1A-211ENST00000538363 ZFPM1Q8IX07 1006 aa12.53□□□□□ -0.4
TNFRSF1A-211ENST00000538363 TMTC2Q8N394 836 aa12.53□□□□□ -0.4
TNFRSF1A-211ENST00000538363 BRF1Q92994 677 aa12.53□□□□□ -0.4
TNFRSF1A-211ENST00000538363 ZKSCAN3Q9BRR0 538 aa12.53□□□□□ -0.4
TNFRSF1A-211ENST00000538363 LARP6Q9BRS8 491 aaKnown RBP12.53□□□□□ -0.4
TNFRSF1A-211ENST00000538363 CABP5Q9NP86 173 aa12.53□□□□□ -0.4
TNFRSF1A-211ENST00000538363 ZSWIM5Q9P217 1185 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms