RNA–Protein interactions for RNA: ENST00000538136.1

MSH6-209, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 4,055 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-209ENST00000538136 ESYT1Q9BSJ8 1104 aa8.47□□□□□ -1.05
MSH6-209ENST00000538136 TAF1DQ9H5J8 278 aaPredicted RBP8.47□□□□□ -1.05
MSH6-209ENST00000538136 DDTLA6NHG4 134 aaPredicted RBP8.46□□□□□ -1.05
MSH6-209ENST00000538136 HSPD1P10809 573 aaKnown RBP8.46□□□□□ -1.05
MSH6-209ENST00000538136 CASP7P55210 303 aa8.46□□□□□ -1.05
MSH6-209ENST00000538136 TMEM132AQ24JP5 1023 aa8.46□□□□□ -1.05
MSH6-209ENST00000538136 RABL6Q3YEC7 729 aaPredicted RBP8.46□□□□□ -1.05
MSH6-209ENST00000538136 HAUS7Q99871 368 aa8.46□□□□□ -1.05
MSH6-209ENST00000538136 RNF41Q9H4P4 317 aaPredicted RBP8.46□□□□□ -1.05
MSH6-209ENST00000538136 RBM19Q9Y4C8 960 aaKnown RBP8.46□□□□□ -1.05
MSH6-209ENST00000538136 DDX39AO00148 427 aaKnown RBP8.46□□□□□ -1.06
MSH6-209ENST00000538136 CIAO1O76071 339 aa8.46□□□□□ -1.06
MSH6-209ENST00000538136 PPARAQ07869 468 aa8.46□□□□□ -1.06
MSH6-209ENST00000538136 Q3C1V9 767 aa8.46□□□□□ -1.06
MSH6-209ENST00000538136 Q6ZUG5 572 aa8.46□□□□□ -1.06
MSH6-209ENST00000538136 ADGRA1Q86SQ6 560 aa8.46□□□□□ -1.06
MSH6-209ENST00000538136 KCNA3P22001 575 aa8.46□□□□□ -1.06
MSH6-209ENST00000538136 GPC2Q8N158 579 aa8.46□□□□□ -1.06
MSH6-209ENST00000538136 NSUN4Q96CB9 384 aaKnown RBP8.46□□□□□ -1.06
MSH6-209ENST00000538136 IBTKQ9P2D0 1353 aaPredicted RBP8.45□□□□□ -1.06
MSH6-209ENST00000538136 HOXA10P31260 410 aaPredicted RBP8.45□□□□□ -1.06
MSH6-209ENST00000538136 MTMR2Q13614 643 aa8.45□□□□□ -1.06
MSH6-209ENST00000538136 TRIM22Q8IYM9 498 aa8.45□□□□□ -1.06
MSH6-209ENST00000538136 TDRD7Q8NHU6 1098 aaKnown RBP8.45□□□□□ -1.06
MSH6-209ENST00000538136 PI4KBQ9UBF8 816 aa8.45□□□□□ -1.06
MSH6-209ENST00000538136 CPA4Q9UI42 421 aa8.45□□□□□ -1.06
MSH6-209ENST00000538136 DACT2Q5SW24 774 aa8.45□□□□□ -1.06
MSH6-209ENST00000538136 SCLT1Q96NL6 688 aa8.45□□□□□ -1.06
MSH6-209ENST00000538136 AOC2O75106 756 aa8.45□□□□□ -1.06
MSH6-209ENST00000538136 POLA2Q14181 598 aa8.45□□□□□ -1.06
MSH6-209ENST00000538136 SAFBQ15424 915 aaKnown RBP eCLIP8.45□□□□□ -1.06
MSH6-209ENST00000538136 FAM47CQ5HY64 1035 aa8.45□□□□□ -1.06
MSH6-209ENST00000538136 CREB3L3Q68CJ9 461 aa8.45□□□□□ -1.06
MSH6-209ENST00000538136 RASGRP2Q7LDG7 609 aa8.45□□□□□ -1.06
MSH6-209ENST00000538136 DPP9Q86TI2 863 aa8.45□□□□□ -1.06
MSH6-209ENST00000538136 FBXO28Q9NVF7 368 aa8.45□□□□□ -1.06
MSH6-209ENST00000538136 KCPQ6ZWJ8 1503 aa8.45□□□□□ -1.06
MSH6-209ENST00000538136 CCL15-CCL14A0A0B4J2E2 113 aa8.44□□□□□ -1.06
MSH6-209ENST00000538136 CYP2C8P10632 490 aa8.44□□□□□ -1.06
MSH6-209ENST00000538136 ADD2P35612 726 aa8.44□□□□□ -1.06
MSH6-209ENST00000538136 NLRP5P59047 1200 aa8.44□□□□□ -1.06
MSH6-209ENST00000538136 CCL15Q16663 113 aa8.44□□□□□ -1.06
MSH6-209ENST00000538136 DEFB115Q30KQ5 88 aa8.44□□□□□ -1.06
MSH6-209ENST00000538136 FBXO33Q7Z6M2 555 aa8.44□□□□□ -1.06
MSH6-209ENST00000538136 ANKRD35Q8N283 1001 aa8.44□□□□□ -1.06
MSH6-209ENST00000538136 PPP1R13LQ8WUF5 828 aa8.44□□□□□ -1.06
MSH6-209ENST00000538136 PGBD1Q96JS3 809 aa8.44□□□□□ -1.06
MSH6-209ENST00000538136 ARHGEF10LQ9HCE6 1279 aa8.44□□□□□ -1.06
MSH6-209ENST00000538136 MAP1BP46821 2468 aaKnown RBP8.44□□□□□ -1.06
MSH6-209ENST00000538136 ATP10DQ9P241 1426 aa8.44□□□□□ -1.06
MSH6-209ENST00000538136 AKR1B1P15121 316 aa8.44□□□□□ -1.06
MSH6-209ENST00000538136 CYP2B6P20813 491 aa8.44□□□□□ -1.06
MSH6-209ENST00000538136 ECE1P42892 770 aa8.44□□□□□ -1.06
MSH6-209ENST00000538136 CRY2Q49AN0 593 aa8.44□□□□□ -1.06
MSH6-209ENST00000538136 L1TD1Q5T7N2 865 aaKnown RBP8.44□□□□□ -1.06
MSH6-209ENST00000538136 AOX1Q06278 1338 aa8.44□□□□□ -1.06
MSH6-209ENST00000538136 TTC41PQ6P2S7 1318 aa8.44□□□□□ -1.06
MSH6-209ENST00000538136 TBC1D8O95759 1140 aa8.44□□□□□ -1.06
MSH6-209ENST00000538136 METAP2P50579 478 aaKnown RBP eCLIP8.44□□□□□ -1.06
MSH6-209ENST00000538136 ACER1Q8TDN7 264 aa8.44□□□□□ -1.06
MSH6-209ENST00000538136 DDX4Q9NQI0 724 aaKnown RBP8.44□□□□□ -1.06
MSH6-209ENST00000538136 V9GY48 417 aaPredicted RBP8.44□□□□□ -1.06
MSH6-209ENST00000538136 SPDYE2BA6NHP3 402 aa8.44□□□□□ -1.06
MSH6-209ENST00000538136 PATL2C9JE40 543 aaKnown RBP8.44□□□□□ -1.06
MSH6-209ENST00000538136 SPDYE6P0CI01 402 aa8.44□□□□□ -1.06
MSH6-209ENST00000538136 MCM5P33992 734 aa8.44□□□□□ -1.06
MSH6-209ENST00000538136 CDK8P49336 464 aa8.44□□□□□ -1.06
MSH6-209ENST00000538136 DCP1AQ9NPI6 582 aaPredicted RBP8.44□□□□□ -1.06
MSH6-209ENST00000538136 PES1O00541 588 aaKnown RBP8.43□□□□□ -1.06
MSH6-209ENST00000538136 SEMA3EO15041 775 aa8.43□□□□□ -1.06
MSH6-209ENST00000538136 ZBTB43O43298 467 aa8.43□□□□□ -1.06
MSH6-209ENST00000538136 ADD1P35611 737 aaKnown RBP8.43□□□□□ -1.06
MSH6-209ENST00000538136 SLFN13Q68D06 897 aa8.43□□□□□ -1.06
MSH6-209ENST00000538136 CKAP2LQ8IYA6 745 aa8.43□□□□□ -1.06
MSH6-209ENST00000538136 ANKRD13CQ8N6S4 541 aa8.43□□□□□ -1.06
MSH6-209ENST00000538136 CDCA5Q96FF9 252 aa8.43□□□□□ -1.06
MSH6-209ENST00000538136 MYOM1P52179 1685 aa8.43□□□□□ -1.06
MSH6-209ENST00000538136 FIBPO43427 364 aa8.43□□□□□ -1.06
MSH6-209ENST00000538136 JAKMIP3Q5VZ66 844 aa8.43□□□□□ -1.06
MSH6-209ENST00000538136 PLIN2Q99541 437 aa8.43□□□□□ -1.06
MSH6-209ENST00000538136 RTEL1Q9NZ71 1219 aa8.43□□□□□ -1.06
MSH6-209ENST00000538136 TFIP11Q9UBB9 837 aaKnown RBP8.43□□□□□ -1.06
MSH6-209ENST00000538136 NOP58Q9Y2X3 529 aaKnown RBP8.43□□□□□ -1.06
MSH6-209ENST00000538136 KIF20BQ96Q89 1820 aa8.43□□□□□ -1.06
MSH6-209ENST00000538136 CHMP2AO43633 222 aa8.43□□□□□ -1.06
MSH6-209ENST00000538136 ADCK5Q3MIX3 580 aa8.43□□□□□ -1.06
MSH6-209ENST00000538136 BMP2KLQ5H9B9 411 aa8.43□□□□□ -1.06
MSH6-209ENST00000538136 FAM83BQ5T0W9 1011 aa8.43□□□□□ -1.06
MSH6-209ENST00000538136 CHADLQ6NUI6 762 aa8.43□□□□□ -1.06
MSH6-209ENST00000538136 GPKOWQ92917 476 aaPredicted RBP eCLIP8.43□□□□□ -1.061e-10■■□□□ 11.7
MSH6-209ENST00000538136 GDPD2Q9HCC8 539 aa8.43□□□□□ -1.06
MSH6-209ENST00000538136 DDX49Q9Y6V7 483 aaKnown RBP8.43□□□□□ -1.06
MSH6-209ENST00000538136 AK9Q5TCS8 1911 aa8.42□□□□□ -1.06
MSH6-209ENST00000538136 NAPAP54920 295 aa8.42□□□□□ -1.06
MSH6-209ENST00000538136 RASEFQ8IZ41 740 aa8.42□□□□□ -1.06
MSH6-209ENST00000538136 PLA2G12BQ9BX93 195 aa8.42□□□□□ -1.06
MSH6-209ENST00000538136 ZHX1Q9UKY1 873 aaPredicted RBP8.42□□□□□ -1.06
MSH6-209ENST00000538136 TAF6LQ9Y6J9 622 aa8.42□□□□□ -1.06
MSH6-209ENST00000538136 KNDC1Q76NI1 1749 aa8.42□□□□□ -1.06
MSH6-209ENST00000538136 MROH7-TTC4A0A0A0MT08 1334 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms