RNA–Protein interactions for RNA: ENST00000538077.2

LINC00346-201, long intergenic non-protein coding RNA 346, humanhuman

BASIC

Gene LINC00346, Length 6,265 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346-201ENST00000538077 DCTPP1Q9H773 170 aa12.54□□□□□ -0.4
LINC00346-201ENST00000538077 ATP2A1O14983 1001 aa12.54□□□□□ -0.4
LINC00346-201ENST00000538077 ABL1P00519 1130 aa12.54□□□□□ -0.4
LINC00346-201ENST00000538077 IQUBQ8NA54 791 aa12.54□□□□□ -0.4
LINC00346-201ENST00000538077 RDH13Q8NBN7 331 aa12.54□□□□□ -0.4
LINC00346-201ENST00000538077 SUPT20HQ8NEM7 779 aa12.54□□□□□ -0.4
LINC00346-201ENST00000538077 KIFAP3Q92845 792 aa12.54□□□□□ -0.4
LINC00346-201ENST00000538077 MAST3O60307 1309 aa12.54□□□□□ -0.4
LINC00346-201ENST00000538077 TESPA1A2RU30 521 aaPredicted RBP12.54□□□□□ -0.4
LINC00346-201ENST00000538077 ZFYVE9O95405 1425 aa12.54□□□□□ -0.4
LINC00346-201ENST00000538077 DNMT1P26358 1616 aaKnown RBP12.54□□□□□ -0.4
LINC00346-201ENST00000538077 FAM200AQ8TCP9 573 aa12.54□□□□□ -0.4
LINC00346-201ENST00000538077 H7C1D1 291 aa12.54□□□□□ -0.4
LINC00346-201ENST00000538077 KRT86O43790 486 aa12.54□□□□□ -0.4
LINC00346-201ENST00000538077 ARHGEF16Q5VV41 709 aa12.54□□□□□ -0.4
LINC00346-201ENST00000538077 TPH2Q8IWU9 490 aa12.54□□□□□ -0.4
LINC00346-201ENST00000538077 POLR2DO15514 142 aaKnown RBP12.53□□□□□ -0.4
LINC00346-201ENST00000538077 SPOPO43791 374 aa12.53□□□□□ -0.4
LINC00346-201ENST00000538077 DEXIO95424 95 aa12.53□□□□□ -0.4
LINC00346-201ENST00000538077 KCNQ4P56696 695 aa12.53□□□□□ -0.4
LINC00346-201ENST00000538077 SLC8A3P57103 927 aa12.53□□□□□ -0.4
LINC00346-201ENST00000538077 CCDC6Q16204 474 aa12.53□□□□□ -0.4
LINC00346-201ENST00000538077 WDR66Q8TBY9 1149 aa12.53□□□□□ -0.4
LINC00346-201ENST00000538077 RPL13P26373 211 aaKnown RBP12.53□□□□□ -0.4
LINC00346-201ENST00000538077 CALCRLQ16602 461 aa12.53□□□□□ -0.4
LINC00346-201ENST00000538077 FAM102BQ5T8I3 360 aa12.53□□□□□ -0.4
LINC00346-201ENST00000538077 BRAPQ7Z569 592 aa12.53□□□□□ -0.4
LINC00346-201ENST00000538077 SESTD1Q86VW0 696 aa12.53□□□□□ -0.4
LINC00346-201ENST00000538077 ATRIPQ8WXE1 791 aa12.53□□□□□ -0.4
LINC00346-201ENST00000538077 DDX12PQ92771 950 aa12.53□□□□□ -0.4
LINC00346-201ENST00000538077 CDCA7Q9BWT1 371 aaPredicted RBP12.53□□□□□ -0.4
LINC00346-201ENST00000538077 SLAIN2Q9P270 581 aa12.53□□□□□ -0.4
LINC00346-201ENST00000538077 PAXBP1Q9Y5B6 917 aa12.53□□□□□ -0.4
LINC00346-201ENST00000538077 LPXNO60711 386 aa12.53□□□□□ -0.4
LINC00346-201ENST00000538077 ATXN8OSP0DMR3 200 aa12.53□□□□□ -0.4
LINC00346-201ENST00000538077 ZBTB16Q05516 673 aa12.53□□□□□ -0.4
LINC00346-201ENST00000538077 ASIC2Q16515 512 aa12.53□□□□□ -0.4
LINC00346-201ENST00000538077 KMT5BQ4FZB7 885 aa12.53□□□□□ -0.4
LINC00346-201ENST00000538077 CFAP157Q5JU67 520 aa12.53□□□□□ -0.4
LINC00346-201ENST00000538077 SYT10Q6XYQ8 523 aa12.53□□□□□ -0.4
LINC00346-201ENST00000538077 PRPF6O94906 941 aaKnown RBP12.53□□□□□ -0.4
LINC00346-201ENST00000538077 ALDH1B1P30837 517 aa12.53□□□□□ -0.4
LINC00346-201ENST00000538077 MAP7D1Q3KQU3 841 aa12.53□□□□□ -0.4
LINC00346-201ENST00000538077 BEND3Q5T5X7 828 aa12.53□□□□□ -0.4
LINC00346-201ENST00000538077 SNX29Q8TEQ0 813 aa12.53□□□□□ -0.4
LINC00346-201ENST00000538077 MED10Q9BTT4 135 aa12.53□□□□□ -0.4
LINC00346-201ENST00000538077 MRPL44Q9H9J2 332 aaKnown RBP12.53□□□□□ -0.4
LINC00346-201ENST00000538077 MAPKBP1O60336 1514 aa12.53□□□□□ -0.4
LINC00346-201ENST00000538077 GYG1P46976 350 aa12.53□□□□□ -0.4
LINC00346-201ENST00000538077 STAMQ92783 540 aa12.53□□□□□ -0.4
LINC00346-201ENST00000538077 NAP1L4Q99733 375 aaKnown RBP12.53□□□□□ -0.4
LINC00346-201ENST00000538077 CCDC77Q9BR77 488 aa12.53□□□□□ -0.4
LINC00346-201ENST00000538077 NCAPG2Q86XI2 1143 aa12.52□□□□□ -0.4
LINC00346-201ENST00000538077 CFAP65Q6ZU64 1925 aaKnown RBP12.52□□□□□ -0.4
LINC00346-201ENST00000538077 MAGI3Q5TCQ9 1506 aa12.52□□□□□ -0.4
LINC00346-201ENST00000538077 KCNQ3O43525 872 aa12.52□□□□□ -0.4
LINC00346-201ENST00000538077 IGBP1P78318 339 aa12.52□□□□□ -0.4
LINC00346-201ENST00000538077 UTP14CQ5TAP6 766 aaKnown RBP12.52□□□□□ -0.4
LINC00346-201ENST00000538077 LRRC47Q8N1G4 583 aaKnown RBP12.52□□□□□ -0.4
LINC00346-201ENST00000538077 PLEKHA4Q9H4M7 779 aa12.52□□□□□ -0.4
LINC00346-201ENST00000538077 ELP1O95163 1332 aa12.52□□□□□ -0.41
LINC00346-201ENST00000538077 IL13P35225 146 aa12.52□□□□□ -0.41
LINC00346-201ENST00000538077 TTC38Q5R3I4 469 aa12.52□□□□□ -0.41
LINC00346-201ENST00000538077 KIAA0825Q8IV33 1275 aa12.52□□□□□ -0.41
LINC00346-201ENST00000538077 LPIN2Q92539 896 aa12.52□□□□□ -0.41
LINC00346-201ENST00000538077 CSADQ9Y600 493 aa12.52□□□□□ -0.41
LINC00346-201ENST00000538077 SBNO1A3KN83 1393 aa12.52□□□□□ -0.41
LINC00346-201ENST00000538077 TRIM37O94972 964 aa12.52□□□□□ -0.41
LINC00346-201ENST00000538077 SEC24BO95487 1268 aa12.52□□□□□ -0.41
LINC00346-201ENST00000538077 USP26Q9BXU7 913 aa12.52□□□□□ -0.41
LINC00346-201ENST00000538077 NSRP1Q9H0G5 558 aaKnown RBP12.52□□□□□ -0.41
LINC00346-201ENST00000538077 DNAJC5Q9H3Z4 198 aa12.52□□□□□ -0.41
LINC00346-201ENST00000538077 VPS54Q9P1Q0 977 aa12.52□□□□□ -0.41
LINC00346-201ENST00000538077 TRPC6Q9Y210 931 aa12.52□□□□□ -0.41
LINC00346-201ENST00000538077 PDE6BP35913 854 aa12.52□□□□□ -0.41
LINC00346-201ENST00000538077 TFAP4Q01664 338 aa12.52□□□□□ -0.41
LINC00346-201ENST00000538077 GCKRQ14397 625 aa12.52□□□□□ -0.41
LINC00346-201ENST00000538077 NOLC1Q14978 699 aaKnown RBP eCLIP12.52□□□□□ -0.41
LINC00346-201ENST00000538077 MYO1AQ9UBC5 1043 aa12.52□□□□□ -0.41
LINC00346-201ENST00000538077 ZCCHC11Q5TAX3 1644 aaKnown RBP12.51□□□□□ -0.41
LINC00346-201ENST00000538077 PNMA6EA0A0J9YXQ4 647 aa12.51□□□□□ -0.41
LINC00346-201ENST00000538077 BIRC2Q13490 618 aa12.51□□□□□ -0.41
LINC00346-201ENST00000538077 C8orf34Q49A92 452 aa12.51□□□□□ -0.41
LINC00346-201ENST00000538077 FAM204AQ9H8W3 233 aa12.51□□□□□ -0.41
LINC00346-201ENST00000538077 COL17A1Q9UMD9 1497 aaPredicted RBP12.51□□□□□ -0.41
LINC00346-201ENST00000538077 PLCD1P51178 756 aa12.51□□□□□ -0.41
LINC00346-201ENST00000538077 MFSD14BQ5SR56 506 aa12.51□□□□□ -0.41
LINC00346-201ENST00000538077 CCDC122Q5T0U0 273 aa12.51□□□□□ -0.41
LINC00346-201ENST00000538077 HAUS3Q68CZ6 603 aa12.51□□□□□ -0.41
LINC00346-201ENST00000538077 SMC1BQ8NDV3 1235 aa12.51□□□□□ -0.41
LINC00346-201ENST00000538077 IPO4Q8TEX9 1081 aaKnown RBP12.51□□□□□ -0.41
LINC00346-201ENST00000538077 GLG1Q92896 1179 aa12.51□□□□□ -0.41
LINC00346-201ENST00000538077 EDC3Q96F86 508 aaKnown RBP12.51□□□□□ -0.41
LINC00346-201ENST00000538077 SEC62Q99442 399 aaKnown RBP12.51□□□□□ -0.41
LINC00346-201ENST00000538077 PFDN4Q9NQP4 134 aa12.51□□□□□ -0.41
LINC00346-201ENST00000538077 RSPH14Q9UHP6 348 aa12.51□□□□□ -0.41
LINC00346-201ENST00000538077 LUC7L2Q9Y383 392 aaKnown RBP12.51□□□□□ -0.41
LINC00346-201ENST00000538077 SNX14Q9Y5W7 946 aa12.51□□□□□ -0.41
LINC00346-201ENST00000538077 GOLGA8HP0CJ92 632 aa12.51□□□□□ -0.41
LINC00346-201ENST00000538077 CTSWP56202 376 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms