RNA–Protein interactions for RNA: ENST00000538039.5

CLPB-209, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CLPB, Length 3,078 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-209ENST00000538039 PAPPAQ13219 1627 aa16.17■□□□□ 0.18
CLPB-209ENST00000538039 CUTAO60888 179 aa16.17■□□□□ 0.18
CLPB-209ENST00000538039 GNG11P61952 73 aa16.17■□□□□ 0.18
CLPB-209ENST00000538039 TPM4P67936 248 aa16.17■□□□□ 0.18
CLPB-209ENST00000538039 NLRP10Q86W26 655 aa16.17■□□□□ 0.18
CLPB-209ENST00000538039 DIS3L2Q8IYB7 885 aaKnown RBP16.17■□□□□ 0.18
CLPB-209ENST00000538039 BAG1Q99933 345 aaPredicted RBP16.17■□□□□ 0.18
CLPB-209ENST00000538039 TNS2Q63HR2 1409 aa16.17■□□□□ 0.18
CLPB-209ENST00000538039 A0A0U1RQG5 324 aaPredicted RBP16.17■□□□□ 0.18
CLPB-209ENST00000538039 MAP3K9P80192 1104 aa16.17■□□□□ 0.18
CLPB-209ENST00000538039 POSTNQ15063 836 aa16.17■□□□□ 0.18
CLPB-209ENST00000538039 RRP12Q5JTH9 1297 aaKnown RBP16.17■□□□□ 0.18
CLPB-209ENST00000538039 IFNL3Q8IZI9 196 aa16.17■□□□□ 0.18
CLPB-209ENST00000538039 DHX58Q96C10 678 aa16.17■□□□□ 0.18
CLPB-209ENST00000538039 NOL10Q9BSC4 688 aaKnown RBP16.17■□□□□ 0.18
CLPB-209ENST00000538039 PLA2G12BQ9BX93 195 aa16.17■□□□□ 0.18
CLPB-209ENST00000538039 TRHP20396 242 aaPredicted RBP16.16■□□□□ 0.18
CLPB-209ENST00000538039 SGMS1Q86VZ5 419 aa16.16■□□□□ 0.18
CLPB-209ENST00000538039 KRI1Q8N9T8 703 aaKnown RBP16.16■□□□□ 0.18
CLPB-209ENST00000538039 PIGBQ92521 554 aa16.16■□□□□ 0.18
CLPB-209ENST00000538039 CCDC34Q96HJ3 373 aa16.16■□□□□ 0.18
CLPB-209ENST00000538039 CNNM1Q9NRU3 951 aa16.16■□□□□ 0.18
CLPB-209ENST00000538039 TNS3Q68CZ2 1445 aa16.16■□□□□ 0.18
CLPB-209ENST00000538039 GSG1L2A8MUP6 293 aa16.16■□□□□ 0.18
CLPB-209ENST00000538039 IFIT3O14879 490 aaKnown RBP16.16■□□□□ 0.18
CLPB-209ENST00000538039 ACTN4O43707 911 aaKnown RBP16.16■□□□□ 0.18
CLPB-209ENST00000538039 MBD4O95243 580 aa16.16■□□□□ 0.18
CLPB-209ENST00000538039 MMP1P03956 469 aa16.16■□□□□ 0.18
CLPB-209ENST00000538039 NKX1-1Q15270 411 aaPredicted RBP16.16■□□□□ 0.18
CLPB-209ENST00000538039 MAGEB6Q8N7X4 407 aa16.16■□□□□ 0.18
CLPB-209ENST00000538039 SLIT2O94813 1529 aa16.15■□□□□ 0.18
CLPB-209ENST00000538039 ADAMTS3O15072 1205 aa16.15■□□□□ 0.18
CLPB-209ENST00000538039 PDE8BO95263 885 aa16.15■□□□□ 0.18
CLPB-209ENST00000538039 STX17P56962 302 aa16.15■□□□□ 0.18
CLPB-209ENST00000538039 TRIM28Q13263 835 aaKnown RBP16.15■□□□□ 0.18
CLPB-209ENST00000538039 MORC3Q14149 939 aa16.15■□□□□ 0.18
CLPB-209ENST00000538039 EPSTI1Q96J88 318 aa16.15■□□□□ 0.18
CLPB-209ENST00000538039 TRERF1Q96PN7 1200 aa16.15■□□□□ 0.18
CLPB-209ENST00000538039 UBXN6Q9BZV1 441 aa16.15■□□□□ 0.18
CLPB-209ENST00000538039 CSRNP2Q9H175 543 aa16.15■□□□□ 0.18
CLPB-209ENST00000538039 WDR17Q8IZU2 1322 aa16.15■□□□□ 0.18
CLPB-209ENST00000538039 FMNL1O95466 1100 aaPredicted RBP16.15■□□□□ 0.18
CLPB-209ENST00000538039 PTPREP23469 700 aa16.15■□□□□ 0.18
CLPB-209ENST00000538039 EVX2Q03828 476 aa16.15■□□□□ 0.18
CLPB-209ENST00000538039 DPYDQ12882 1025 aa16.15■□□□□ 0.18
CLPB-209ENST00000538039 RASGRF1Q13972 1273 aa16.15■□□□□ 0.18
CLPB-209ENST00000538039 UBE3CQ15386 1083 aa16.15■□□□□ 0.18
CLPB-209ENST00000538039 LRRFIP1Q32MZ4 808 aaKnown RBP16.15■□□□□ 0.18
CLPB-209ENST00000538039 OLFM4Q6UX06 510 aa16.15■□□□□ 0.18
CLPB-209ENST00000538039 RAD9BQ6WBX8 426 aa16.15■□□□□ 0.18
CLPB-209ENST00000538039 STRN4Q9NRL3 753 aa16.15■□□□□ 0.18
CLPB-209ENST00000538039 LRP6O75581 1613 aa16.15■□□□□ 0.18
CLPB-209ENST00000538039 ATRNO75882 1429 aa16.15■□□□□ 0.18
CLPB-209ENST00000538039 BAZ2BQ9UIF8 2168 aaKnown RBP16.15■□□□□ 0.18
CLPB-209ENST00000538039 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.15■□□□□ 0.18
CLPB-209ENST00000538039 RNF225M0QZC1 329 aaPredicted RBP16.15■□□□□ 0.18
CLPB-209ENST00000538039 CYP2C19P33261 490 aa16.15■□□□□ 0.18
CLPB-209ENST00000538039 CTSWP56202 376 aa16.15■□□□□ 0.18
CLPB-209ENST00000538039 LCORLQ8N3X6 602 aa16.15■□□□□ 0.18
CLPB-209ENST00000538039 NEK11Q8NG66 645 aa16.15■□□□□ 0.18
CLPB-209ENST00000538039 MRFAP1Q9Y605 127 aa16.15■□□□□ 0.18
CLPB-209ENST00000538039 SLC12A7Q9Y666 1083 aa16.15■□□□□ 0.18
CLPB-209ENST00000538039 KAT6BQ8WYB5 2073 aa16.15■□□□□ 0.18
CLPB-209ENST00000538039 ARHGAP6O43182 974 aa16.14■□□□□ 0.17
CLPB-209ENST00000538039 SSRP1Q08945 709 aaKnown RBP16.14■□□□□ 0.17
CLPB-209ENST00000538039 NR1I3Q14994 352 aa16.14■□□□□ 0.17
CLPB-209ENST00000538039 NT5DC1Q5TFE4 455 aa16.14■□□□□ 0.17
CLPB-209ENST00000538039 RSRC2Q7L4I2 434 aaKnown RBP16.14■□□□□ 0.17
CLPB-209ENST00000538039 MNS1Q8NEH6 495 aa16.14■□□□□ 0.17
CLPB-209ENST00000538039 CPLX3Q8WVH0 158 aa16.14■□□□□ 0.17
CLPB-209ENST00000538039 STAMQ92783 540 aa16.14■□□□□ 0.17
CLPB-209ENST00000538039 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.14■□□□□ 0.17
CLPB-209ENST00000538039 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.14■□□□□ 0.17
CLPB-209ENST00000538039 TEX35Q5T0J7 233 aa16.14■□□□□ 0.17
CLPB-209ENST00000538039 CC2D1AQ6P1N0 951 aaPredicted RBP16.14■□□□□ 0.17
CLPB-209ENST00000538039 ADGRA1Q86SQ6 560 aa16.14■□□□□ 0.17
CLPB-209ENST00000538039 MIGA1Q8NAN2 632 aa16.14■□□□□ 0.17
CLPB-209ENST00000538039 AIDAQ96BJ3 306 aa16.14■□□□□ 0.17
CLPB-209ENST00000538039 CHMP4CQ96CF2 233 aa16.14■□□□□ 0.17
CLPB-209ENST00000538039 PARD6BQ9BYG5 372 aa16.14■□□□□ 0.17
CLPB-209ENST00000538039 PRDM11Q9NQV5 511 aa16.14■□□□□ 0.17
CLPB-209ENST00000538039 PRDM1O75626 825 aa16.13■□□□□ 0.17
CLPB-209ENST00000538039 SPECC1LQ69YQ0 1117 aa16.13■□□□□ 0.17
CLPB-209ENST00000538039 GIGYF2Q6Y7W6 1299 aaKnown RBP16.13■□□□□ 0.17
CLPB-209ENST00000538039 CABP5Q9NP86 173 aa16.13■□□□□ 0.17
CLPB-209ENST00000538039 LZTFL1Q9NQ48 299 aa16.13■□□□□ 0.17
CLPB-209ENST00000538039 EFCAB8A8MWE9 144 aa16.13■□□□□ 0.17
CLPB-209ENST00000538039 IRS4O14654 1257 aaPredicted RBP16.13■□□□□ 0.17
CLPB-209ENST00000538039 CBFA2T2O43439 604 aa16.13■□□□□ 0.17
CLPB-209ENST00000538039 JMYQ8N9B5 988 aa16.13■□□□□ 0.17
CLPB-209ENST00000538039 TMEM87BQ96K49 555 aa16.13■□□□□ 0.17
CLPB-209ENST00000538039 CHD4Q14839 1912 aa16.13■□□□□ 0.17
CLPB-209ENST00000538039 IFNAR1P17181 557 aa16.13■□□□□ 0.17
CLPB-209ENST00000538039 ARID4AP29374 1257 aaPredicted RBP16.13■□□□□ 0.17
CLPB-209ENST00000538039 AFMP43652 599 aa16.13■□□□□ 0.17
CLPB-209ENST00000538039 HNRNPH2P55795 449 aaKnown RBP16.13■□□□□ 0.17
CLPB-209ENST00000538039 KLHL10Q6JEL2 608 aa16.13■□□□□ 0.17
CLPB-209ENST00000538039 TMCO3Q6UWJ1 677 aa16.13■□□□□ 0.17
CLPB-209ENST00000538039 SMARCE1Q969G3 411 aa16.13■□□□□ 0.17
CLPB-209ENST00000538039 TBC1D2BQ9UPU7 963 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms