RNA–Protein interactions for RNA: ENST00000537934.5

SEMA4D-221, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-221ENST00000537934 FBXW10Q5XX13 1052 aa12.95□□□□□ -0.34
SEMA4D-221ENST00000537934 NAA16Q6N069 864 aaPredicted RBP12.95□□□□□ -0.34
SEMA4D-221ENST00000537934 GBP6Q6ZN66 633 aa12.95□□□□□ -0.34
SEMA4D-221ENST00000537934 DZIP3Q86Y13 1208 aaKnown RBP12.95□□□□□ -0.34
SEMA4D-221ENST00000537934 LINC00116Q8NCU8 138 aa12.95□□□□□ -0.34
SEMA4D-221ENST00000537934 KLHDC4Q8TBB5 520 aa12.95□□□□□ -0.34
SEMA4D-221ENST00000537934 TCEANC2Q96MN5 208 aa12.95□□□□□ -0.34
SEMA4D-221ENST00000537934 USP28Q96RU2 1077 aa12.95□□□□□ -0.34
SEMA4D-221ENST00000537934 BAG1Q99933 345 aaPredicted RBP12.95□□□□□ -0.34
SEMA4D-221ENST00000537934 TUBB2BQ9BVA1 445 aa12.95□□□□□ -0.34
SEMA4D-221ENST00000537934 FTOQ9C0B1 505 aaKnown RBP eCLIP12.95□□□□□ -0.34
SEMA4D-221ENST00000537934 VIPAS39Q9H9C1 493 aa12.95□□□□□ -0.34
SEMA4D-221ENST00000537934 GNL3LQ9NVN8 582 aaKnown RBP12.95□□□□□ -0.34
SEMA4D-221ENST00000537934 FAM169AQ9Y6X4 670 aa12.95□□□□□ -0.34
SEMA4D-221ENST00000537934 DDR1Q08345 913 aa12.94□□□□□ -0.34
SEMA4D-221ENST00000537934 GIMAP7Q8NHV1 300 aa12.94□□□□□ -0.34
SEMA4D-221ENST00000537934 ISCA1Q9BUE6 129 aa12.94□□□□□ -0.34
SEMA4D-221ENST00000537934 HSD3B7Q9H2F3 369 aa12.94□□□□□ -0.34
SEMA4D-221ENST00000537934 CDC23Q9UJX2 597 aa12.94□□□□□ -0.34
SEMA4D-221ENST00000537934 MYH15Q9Y2K3 1946 aa12.94□□□□□ -0.34
SEMA4D-221ENST00000537934 SBF2Q86WG5 1849 aa12.94□□□□□ -0.34
SEMA4D-221ENST00000537934 H7C1W4 665 aa12.94□□□□□ -0.34
SEMA4D-221ENST00000537934 EBAG9O00559 213 aa12.94□□□□□ -0.34
SEMA4D-221ENST00000537934 SHOX2O60902 331 aaPredicted RBP12.94□□□□□ -0.34
SEMA4D-221ENST00000537934 ATP1A3P13637 1013 aa12.94□□□□□ -0.34
SEMA4D-221ENST00000537934 GIGYF2Q6Y7W6 1299 aaKnown RBP12.94□□□□□ -0.34
SEMA4D-221ENST00000537934 SMIM5Q71RC9 77 aa12.94□□□□□ -0.34
SEMA4D-221ENST00000537934 PRPF38AQ8NAV1 312 aaKnown RBP12.94□□□□□ -0.34
SEMA4D-221ENST00000537934 CTCFLQ8NI51 663 aaPredicted RBP12.94□□□□□ -0.34
SEMA4D-221ENST00000537934 A0A1W2PQ27 194 aa12.93□□□□□ -0.34
SEMA4D-221ENST00000537934 A0A1W2PQ64 194 aa12.93□□□□□ -0.34
SEMA4D-221ENST00000537934 A0A1W2PQD8 194 aa12.93□□□□□ -0.34
SEMA4D-221ENST00000537934 LRRIQ3A6PVS8 624 aaPredicted RBP12.93□□□□□ -0.34
SEMA4D-221ENST00000537934 PRPF6O94906 941 aaKnown RBP12.93□□□□□ -0.34
SEMA4D-221ENST00000537934 SERPINC1P01008 464 aa12.93□□□□□ -0.34
SEMA4D-221ENST00000537934 CALRP27797 417 aaKnown RBP12.93□□□□□ -0.34
SEMA4D-221ENST00000537934 NBPF20Q3BBV1 942 aa12.93□□□□□ -0.34
SEMA4D-221ENST00000537934 GRIPAP1Q4V328 841 aa12.93□□□□□ -0.34
SEMA4D-221ENST00000537934 ADALQ6DHV7 355 aa12.93□□□□□ -0.34
SEMA4D-221ENST00000537934 TBC1D22AQ8WUA7 517 aa12.93□□□□□ -0.34
SEMA4D-221ENST00000537934 DPF2Q92785 391 aa12.93□□□□□ -0.34
SEMA4D-221ENST00000537934 CLIC6Q96NY7 704 aa12.93□□□□□ -0.34
SEMA4D-221ENST00000537934 PUF60Q9UHX1 559 aaKnown RBP12.93□□□□□ -0.34
SEMA4D-221ENST00000537934 BRWD3Q6RI45 1802 aa12.93□□□□□ -0.34
SEMA4D-221ENST00000537934 KIF3CO14782 793 aa12.93□□□□□ -0.34
SEMA4D-221ENST00000537934 VSNL1P62760 191 aa12.93□□□□□ -0.34
SEMA4D-221ENST00000537934 GOLGA8FQ08AF8 430 aa12.93□□□□□ -0.34
SEMA4D-221ENST00000537934 GOLGA8DPQ0D2H9 430 aa12.93□□□□□ -0.34
SEMA4D-221ENST00000537934 CFAP100Q494V2 611 aa12.93□□□□□ -0.34
SEMA4D-221ENST00000537934 TOGARAM2Q6ZUX3 1019 aa12.93□□□□□ -0.34
SEMA4D-221ENST00000537934 COL5A3P25940 1745 aaPredicted RBP12.93□□□□□ -0.34
SEMA4D-221ENST00000537934 SYF2O95926 243 aaKnown RBP12.92□□□□□ -0.34
SEMA4D-221ENST00000537934 ISM2Q6H9L7 571 aa12.92□□□□□ -0.34
SEMA4D-221ENST00000537934 MIEF2Q96C03 454 aa12.92□□□□□ -0.34
SEMA4D-221ENST00000537934 JPH2Q9BR39 696 aaPredicted RBP12.92□□□□□ -0.34
SEMA4D-221ENST00000537934 SIL1Q9H173 461 aa12.92□□□□□ -0.34
SEMA4D-221ENST00000537934 SNRKQ9NRH2 765 aa12.92□□□□□ -0.34
SEMA4D-221ENST00000537934 RBM28Q9NW13 759 aaKnown RBP12.92□□□□□ -0.34
SEMA4D-221ENST00000537934 CICQ96RK0 1608 aaPredicted RBP12.92□□□□□ -0.34
SEMA4D-221ENST00000537934 GOLIM4O00461 696 aa12.92□□□□□ -0.34
SEMA4D-221ENST00000537934 MYO1BO43795 1136 aa12.92□□□□□ -0.34
SEMA4D-221ENST00000537934 SLC3A2P08195 630 aaKnown RBP12.92□□□□□ -0.34
SEMA4D-221ENST00000537934 SCP2P22307 547 aa12.92□□□□□ -0.34
SEMA4D-221ENST00000537934 NDUFA8P51970 172 aa12.92□□□□□ -0.34
SEMA4D-221ENST00000537934 SCRN1Q12765 414 aa12.92□□□□□ -0.34
SEMA4D-221ENST00000537934 OS9Q13438 667 aaPredicted RBP12.92□□□□□ -0.34
SEMA4D-221ENST00000537934 NEDD9Q14511 834 aa12.92□□□□□ -0.34
SEMA4D-221ENST00000537934 MAP9Q49MG5 647 aa12.92□□□□□ -0.34
SEMA4D-221ENST00000537934 SYNE4Q8N205 404 aa12.92□□□□□ -0.34
SEMA4D-221ENST00000537934 SMARCC2Q8TAQ2 1214 aa12.92□□□□□ -0.34
SEMA4D-221ENST00000537934 EVI5LQ96CN4 794 aa12.92□□□□□ -0.34
SEMA4D-221ENST00000537934 FAM89AQ96GI7 184 aa12.92□□□□□ -0.34
SEMA4D-221ENST00000537934 PCDHA7Q9UN72 937 aa12.92□□□□□ -0.34
SEMA4D-221ENST00000537934 NEDD4P46934 1319 aa12.92□□□□□ -0.34
SEMA4D-221ENST00000537934 NUP98P52948 1817 aa12.92□□□□□ -0.34
SEMA4D-221ENST00000537934 INPP5BP32019 993 aa12.91□□□□□ -0.34
SEMA4D-221ENST00000537934 CCT5P48643 541 aa12.91□□□□□ -0.34
SEMA4D-221ENST00000537934 TBX2Q13207 712 aaPredicted RBP12.91□□□□□ -0.34
SEMA4D-221ENST00000537934 PPP2R5AQ15172 486 aa12.91□□□□□ -0.34
SEMA4D-221ENST00000537934 CABS1Q96KC9 395 aa12.91□□□□□ -0.34
SEMA4D-221ENST00000537934 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.91□□□□□ -0.34
SEMA4D-221ENST00000537934 RREB1Q92766 1687 aa12.91□□□□□ -0.34
SEMA4D-221ENST00000537934 A0A1B0GVL5 298 aa12.91□□□□□ -0.34
SEMA4D-221ENST00000537934 HIP1O00291 1037 aa12.91□□□□□ -0.34
SEMA4D-221ENST00000537934 ELF1P32519 619 aa12.91□□□□□ -0.34
SEMA4D-221ENST00000537934 FOXO4P98177 505 aa12.91□□□□□ -0.34
SEMA4D-221ENST00000537934 HSP90AB4PQ58FF6 505 aa12.91□□□□□ -0.34
SEMA4D-221ENST00000537934 LMBR1LQ6UX01 489 aa12.91□□□□□ -0.34
SEMA4D-221ENST00000537934 SGSM3Q96HU1 749 aa12.91□□□□□ -0.34
SEMA4D-221ENST00000537934 LLPHQ9BRT6 129 aaKnown RBP12.91□□□□□ -0.34
SEMA4D-221ENST00000537934 HMG20BQ9P0W2 317 aa12.91□□□□□ -0.34
SEMA4D-221ENST00000537934 BIN1O00499 593 aa12.9□□□□□ -0.34
SEMA4D-221ENST00000537934 RABL6Q3YEC7 729 aaPredicted RBP12.9□□□□□ -0.34
SEMA4D-221ENST00000537934 WDR93Q6P2C0 686 aa12.9□□□□□ -0.34
SEMA4D-221ENST00000537934 KRT27Q7Z3Y8 459 aa12.9□□□□□ -0.34
SEMA4D-221ENST00000537934 MCM8Q9UJA3 840 aa12.9□□□□□ -0.34
SEMA4D-221ENST00000537934 CDHR2Q9BYE9 1310 aa12.9□□□□□ -0.34
SEMA4D-221ENST00000537934 RHOXF2BP0C7M4 288 aa12.9□□□□□ -0.34
SEMA4D-221ENST00000537934 MAP2K1Q02750 393 aaPredicted RBP12.9□□□□□ -0.34
SEMA4D-221ENST00000537934 TRIM28Q13263 835 aaKnown RBP12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms