RNA–Protein interactions for RNA: ENST00000536710.1

PRKDC-208, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 4

Gene PRKDC, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-208ENST00000536710 RNF208Q9H0X6 261 aa8.05□□□□□ -1.12
PRKDC-208ENST00000536710 CYP4F12Q9HCS2 524 aa8.05□□□□□ -1.12
PRKDC-208ENST00000536710 PPP1R9AQ9ULJ8 1098 aa8.05□□□□□ -1.12
PRKDC-208ENST00000536710 PRR36Q9H6K5 1346 aa8.04□□□□□ -1.12
PRKDC-208ENST00000536710 ERVK-24P63145 666 aa8.04□□□□□ -1.12
PRKDC-208ENST00000536710 CELF2-AS1Q8N7Q2 184 aa8.04□□□□□ -1.12
PRKDC-208ENST00000536710 C12orf50Q8NA57 414 aaPredicted RBP8.04□□□□□ -1.12
PRKDC-208ENST00000536710 TMEM40Q8WWA1 233 aa8.04□□□□□ -1.12
PRKDC-208ENST00000536710 TMPRSS13Q9BYE2 586 aa8.04□□□□□ -1.12
PRKDC-208ENST00000536710 WNT10AQ9GZT5 417 aa8.04□□□□□ -1.12
PRKDC-208ENST00000536710 GMIPQ9P107 970 aa8.04□□□□□ -1.12
PRKDC-208ENST00000536710 PCDHGC5Q9Y5F6 944 aa8.04□□□□□ -1.12
PRKDC-208ENST00000536710 TACC3Q9Y6A5 838 aa8.04□□□□□ -1.12
PRKDC-208ENST00000536710 TMPRSS2O15393 492 aa8.03□□□□□ -1.12
PRKDC-208ENST00000536710 ELNP15502 786 aa8.03□□□□□ -1.12
PRKDC-208ENST00000536710 OVOS1Q6IE37 1185 aa8.03□□□□□ -1.12
PRKDC-208ENST00000536710 FDX2Q6P4F2 183 aa8.03□□□□□ -1.12
PRKDC-208ENST00000536710 IGF2-ASQ6U949 168 aa8.03□□□□□ -1.12
PRKDC-208ENST00000536710 KIAA1211Q6ZU35 1233 aa8.03□□□□□ -1.12
PRKDC-208ENST00000536710 DYMQ7RTS9 669 aa8.03□□□□□ -1.12
PRKDC-208ENST00000536710 PODNQ7Z5L7 613 aa8.03□□□□□ -1.12
PRKDC-208ENST00000536710 ZSCAN1Q8NBB4 408 aa8.03□□□□□ -1.12
PRKDC-208ENST00000536710 TM9SF2Q99805 663 aa8.03□□□□□ -1.12
PRKDC-208ENST00000536710 MRPL18Q9H0U6 180 aaKnown RBP8.03□□□□□ -1.12
PRKDC-208ENST00000536710 TNKS2Q9H2K2 1166 aa8.03□□□□□ -1.12
PRKDC-208ENST00000536710 FAM86C2PA6NEL3 165 aa8.02□□□□□ -1.13
PRKDC-208ENST00000536710 SLC22A31A6NKX4 558 aa8.02□□□□□ -1.13
PRKDC-208ENST00000536710 ARHGEF15O94989 841 aa8.02□□□□□ -1.13
PRKDC-208ENST00000536710 ADH5P11766 374 aa8.02□□□□□ -1.13
PRKDC-208ENST00000536710 DRD2P14416 443 aa8.02□□□□□ -1.13
PRKDC-208ENST00000536710 GUCY2CP25092 1073 aa8.02□□□□□ -1.13
PRKDC-208ENST00000536710 FXNQ16595 210 aa8.02□□□□□ -1.13
PRKDC-208ENST00000536710 DDR2Q16832 855 aa8.02□□□□□ -1.13
PRKDC-208ENST00000536710 ARSHQ5FYA8 562 aa8.02□□□□□ -1.13
PRKDC-208ENST00000536710 ZBTB37Q5TC79 503 aa8.02□□□□□ -1.13
PRKDC-208ENST00000536710 CDC37L1Q7L3B6 337 aa8.02□□□□□ -1.13
PRKDC-208ENST00000536710 TTC6Q86TZ1 520 aa8.02□□□□□ -1.13
PRKDC-208ENST00000536710 MKL1Q969V6 931 aa8.02□□□□□ -1.13
PRKDC-208ENST00000536710 FANCD2OSQ96PS1 177 aa8.02□□□□□ -1.13
PRKDC-208ENST00000536710 DEPDC7Q96QD5 511 aa8.02□□□□□ -1.13
PRKDC-208ENST00000536710 ATXN3LQ9H3M9 355 aa8.02□□□□□ -1.13
PRKDC-208ENST00000536710 PIDD1Q9HB75 910 aa8.02□□□□□ -1.13
PRKDC-208ENST00000536710 SSU72Q9NP77 194 aaKnown RBP8.02□□□□□ -1.13
PRKDC-208ENST00000536710 NOP53Q9NZM5 478 aaKnown RBP8.02□□□□□ -1.13
PRKDC-208ENST00000536710 CRIM1Q9NZV1 1036 aa8.02□□□□□ -1.13
PRKDC-208ENST00000536710 SYNGAP1Q96PV0 1343 aa8.02□□□□□ -1.13
PRKDC-208ENST00000536710 TLDC2A0PJX2 215 aa8.01□□□□□ -1.13
PRKDC-208ENST00000536710 MEGF11A6BM72 1044 aa8.01□□□□□ -1.13
PRKDC-208ENST00000536710 MEIS3P2A8K0S8 358 aa8.01□□□□□ -1.13
PRKDC-208ENST00000536710 FANCGO15287 622 aa8.01□□□□□ -1.13
PRKDC-208ENST00000536710 DNAJA2O60884 412 aa8.01□□□□□ -1.13
PRKDC-208ENST00000536710 RNGTTO60942 597 aaKnown RBP8.01□□□□□ -1.13
PRKDC-208ENST00000536710 DDAH1O94760 285 aa8.01□□□□□ -1.13
PRKDC-208ENST00000536710 HCLS1P14317 486 aaPredicted RBP8.01□□□□□ -1.13
PRKDC-208ENST00000536710 RAG1P15918 1043 aa8.01□□□□□ -1.13
PRKDC-208ENST00000536710 CASP7P55210 303 aa8.01□□□□□ -1.13
PRKDC-208ENST00000536710 TMEM201Q5SNT2 666 aa8.01□□□□□ -1.13
PRKDC-208ENST00000536710 NLRC3Q7RTR2 1065 aa8.01□□□□□ -1.13
PRKDC-208ENST00000536710 AGGF1Q8N302 714 aaeCLIP8.01□□□□□ -1.13
PRKDC-208ENST00000536710 FAM13CQ8NE31 585 aa8.01□□□□□ -1.13
PRKDC-208ENST00000536710 ZNF507Q8TCN5 953 aa8.01□□□□□ -1.13
PRKDC-208ENST00000536710 ATG4CQ96DT6 458 aa8.01□□□□□ -1.13
PRKDC-208ENST00000536710 SNTG2Q9NY99 539 aa8.01□□□□□ -1.13
PRKDC-208ENST00000536710 USP21Q9UK80 565 aa8.01□□□□□ -1.13
PRKDC-208ENST00000536710 ADAM30Q9UKF2 790 aa8.01□□□□□ -1.13
PRKDC-208ENST00000536710 A0A1W2PQH9 124 aa8□□□□□ -1.13
PRKDC-208ENST00000536710 CHURC1-FNTBB4DL54 471 aa8□□□□□ -1.13
PRKDC-208ENST00000536710 NME1P15531 152 aaKnown RBP8□□□□□ -1.13
PRKDC-208ENST00000536710 ASPAP45381 313 aa8□□□□□ -1.13
PRKDC-208ENST00000536710 RING1Q06587 406 aa8□□□□□ -1.13
PRKDC-208ENST00000536710 SOX4Q06945 474 aaPredicted RBP8□□□□□ -1.13
PRKDC-208ENST00000536710 TTLL4Q14679 1199 aa8□□□□□ -1.13
PRKDC-208ENST00000536710 GRIK4Q16099 956 aa8□□□□□ -1.13
PRKDC-208ENST00000536710 ZNF746Q6NUN9 644 aaPredicted RBP8□□□□□ -1.13
PRKDC-208ENST00000536710 SHISA2Q6UWI4 295 aa8□□□□□ -1.13
PRKDC-208ENST00000536710 ZC3HAV1Q7Z2W4 902 aaKnown RBP8□□□□□ -1.13
PRKDC-208ENST00000536710 C19orf47Q8N9M1 422 aaKnown RBP8□□□□□ -1.13
PRKDC-208ENST00000536710 SMG8Q8ND04 991 aaKnown RBP8□□□□□ -1.13
PRKDC-208ENST00000536710 RNF214Q8ND24 703 aa8□□□□□ -1.13
PRKDC-208ENST00000536710 ACSF2Q96CM8 615 aaPredicted RBP8□□□□□ -1.13
PRKDC-208ENST00000536710 SUGCTQ9HAC7 445 aa8□□□□□ -1.13
PRKDC-208ENST00000536710 DISC1Q9NRI5 854 aa8□□□□□ -1.13
PRKDC-208ENST00000536710 MAPK8IP1Q9UQF2 711 aa8□□□□□ -1.13
PRKDC-208ENST00000536710 UPK3BL1B0FP48 263 aa7.99□□□□□ -1.13
PRKDC-208ENST00000536710 UPK3BL2E5RIL1 263 aa7.99□□□□□ -1.13
PRKDC-208ENST00000536710 CANXP27824 592 aaKnown RBP7.99□□□□□ -1.13
PRKDC-208ENST00000536710 YARSP54577 528 aaKnown RBP7.99□□□□□ -1.13
PRKDC-208ENST00000536710 HID1Q8IV36 788 aa7.99□□□□□ -1.13
PRKDC-208ENST00000536710 PHACTR4Q8IZ21 702 aa7.99□□□□□ -1.13
PRKDC-208ENST00000536710 SLC12A7Q9Y666 1083 aa7.99□□□□□ -1.13
PRKDC-208ENST00000536710 FAM221BA6H8Z2 402 aa7.98□□□□□ -1.13
PRKDC-208ENST00000536710 SART1O43290 800 aaKnown RBP7.98□□□□□ -1.13
PRKDC-208ENST00000536710 ALX3O95076 343 aa7.98□□□□□ -1.13
PRKDC-208ENST00000536710 IFRD2Q12894 506 aaPredicted RBP7.98□□□□□ -1.13
PRKDC-208ENST00000536710 RASA3Q14644 834 aa7.98□□□□□ -1.13
PRKDC-208ENST00000536710 ANKRD34AQ69YU3 496 aa7.98□□□□□ -1.13
PRKDC-208ENST00000536710 C6orf15Q6UXA7 325 aaPredicted RBP7.98□□□□□ -1.13
PRKDC-208ENST00000536710 MCATQ8IVS2 390 aaKnown RBP7.98□□□□□ -1.13
PRKDC-208ENST00000536710 BEND7Q8N7W2 519 aaPredicted RBP7.98□□□□□ -1.13
PRKDC-208ENST00000536710 MICAL1Q8TDZ2 1067 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms